GR420903

EST Overview
NameGR420903
Unique NameGR420903
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length466
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR420903 vs. TrEMBL
Match: B9GIL6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1068986 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.195e-13
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  EGCT GIDVI G +GDM ERGI EAFKVKQAVLL ATEA EMI+
Sbjct:  453 AEHHKEGCTAGIDVISGSIGDMVERGISEAFKVKQAVLLSATEAAEMII 501
[Close]
BLAST of GR420903 vs. TrEMBL
Match: B9R8I3_RICCO (Chaperonin containing t-complex protein 1, beta subunit, tcpb, putative OS=Ricinus communis GN=RCOM_1600010 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13
Identity = 40/49 (81.63%), Postives = 41/49 (83.67%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEHQ EG T GIDVI G VGDMAERGI E+FKVKQAVLL ATEA EMIL
Sbjct:  447 AEHQKEGSTAGIDVITGSVGDMAERGISESFKVKQAVLLSATEAAEMIL 495
[Close]
BLAST of GR420903 vs. TrEMBL
Match: Q940P8_ARATH (AT5g20890/F22D1_60 OS=Arabidopsis thaliana GN=At5g20890 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.511e-12
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  EGC  GIDVI G VGDM ERGI EAFKVKQAVLL ATEA EMIL
Sbjct:  462 AEHHTEGCNAGIDVITGAVGDMEERGIYEAFKVKQAVLLSATEASEMIL 510
[Close]
BLAST of GR420903 vs. TrEMBL
Match: D7M056_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910130 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.511e-12
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  EGC  GIDVI G VGDM ERGI EAFKVKQAVLL ATEA EMIL
Sbjct:  462 AEHHTEGCNAGIDVISGSVGDMEERGIYEAFKVKQAVLLSATEASEMIL 510
[Close]
BLAST of GR420903 vs. TrEMBL
Match: Q6AV23_ORYSJ (Putative TCP-1/cpn60 chaperonin family protein OS=Oryza sativa subsp. japonica GN=OSJNBa0063J18.19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.744e-12
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  E CT GIDVI G VGDM +RGI EAFKVKQA+LL ATEA EMIL
Sbjct:  460 AEHHKENCTAGIDVITGSVGDMQKRGISEAFKVKQAILLSATEAAEMIL 508
[Close]
BLAST of GR420903 vs. TrEMBL
Match: Q10GP3_ORYSJ (T-complex protein 1, beta subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g42220 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.744e-12
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  E CT GIDVI G VGDM +RGI EAFKVKQA+LL ATEA EMIL
Sbjct:  336 AEHHKENCTAGIDVITGSVGDMQKRGISEAFKVKQAILLSATEAAEMIL 384
[Close]
BLAST of GR420903 vs. TrEMBL
Match: B9MTB4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589426 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.744e-12
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  EGCT+GIDVI G +GDM E GI EAFKVK AVLL ATEA EMIL
Sbjct:  462 AEHHKEGCTSGIDVISGSIGDMVELGISEAFKVKHAVLLSATEAAEMIL 510
[Close]
BLAST of GR420903 vs. TrEMBL
Match: A2XJL6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12631 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.744e-12
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  E CT GIDVI G VGDM +RGI EAFKVKQA+LL ATEA EMIL
Sbjct:  384 AEHHKENCTAGIDVITGSVGDMQKRGISEAFKVKQAILLSATEAAEMIL 432
[Close]
BLAST of GR420903 vs. TrEMBL
Match: A7LIT6_9ROSI (Chaperonin (Fragment) OS=Corchorus olitorius PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.280e-11
Identity = 38/49 (77.55%), Postives = 38/49 (77.55%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  EGC   IDVI G VGDMAE GI EAFKVKQAVLL ATEA EMIL
Sbjct:  154 AEHHKEGCNAXIDVITGSVGDMAELGISEAFKVKQAVLLSATEAAEMIL 202
[Close]
BLAST of GR420903 vs. TrEMBL
Match: C5XP67_SORBI (Putative uncharacterized protein Sb03g005190 OS=Sorghum bicolor GN=Sb03g005190 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.415e-10
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  E CT GIDVI G VGDM + GI E+FKVKQA+LL ATEA EMIL
Sbjct:  445 AEHHKENCTAGIDVITGSVGDMQKLGIQESFKVKQAILLSATEAAEMIL 493
[Close]
BLAST of GR420903 vs. TAIR peptide
Match: AT5G20890.1 (| Symbols: | TCP-1/cpn60 chaperonin family protein | chr5:7087020-7089906 REVERSE LENGTH=527)

HSP 1 Score: 75.8702 bits (185), Expect = 1.120e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = -3 
Query:  306 AEHQNEGCTTGIDVIFGFVGDMAERGICEAFKVKQAVLLFATEAGEMIL 452
            AEH  EGC  GIDVI G VGDM ERGI EAFKVKQAVLL ATEA EMIL
Sbjct:  462 AEHHTEGCNAGIDVITGAVGDMEERGIYEAFKVKQAVLLSATEASEMIL 510
The following BLAST results are available for this feature:
BLAST of GR420903 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GIL6_POPTR5.195e-1377.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R8I3_RICCO6.785e-1381.63Chaperonin containing t-complex protein 1, beta su... [more]
Q940P8_ARATH1.511e-1279.59AT5g20890/F22D1_60 OS=Arabidopsis thaliana GN=At5g... [more]
D7M056_ARALY1.511e-1279.59Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q6AV23_ORYSJ5.744e-1275.51Putative TCP-1/cpn60 chaperonin family protein OS=... [more]
Q10GP3_ORYSJ5.744e-1275.51T-complex protein 1, beta subunit, putative, expre... [more]
B9MTB4_POPTR5.744e-1275.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A2XJL6_ORYSI5.744e-1275.51Putative uncharacterized protein OS=Oryza sativa s... [more]
A7LIT6_9ROSI1.280e-1177.55Chaperonin (Fragment) OS=Corchorus olitorius PE=2 ... [more]
C5XP67_SORBI1.415e-1071.43Putative uncharacterized protein Sb03g005190 OS=So... [more]
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BLAST of GR420903 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G20890.11.120e-1479.59| Symbols: | TCP-1/cpn60 chaperonin family protei... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..19
score
NoneNo IPR availableGENE3D1.10.560.10no descriptioncoord: 4..55
score: 4.6
IPR002423Chaperonin Cpn60/TCP-1PANTHERPTHR11353CHAPERONINcoord: 5..58
score: 4.2
IPR002423Chaperonin Cpn60/TCP-1PFAMPF00118Cpn60_TCP1coord: 7..54
score: 6.5
IPR002423Chaperonin Cpn60/TCP-1SUPERFAMILY48592GroEL equatorial domain-likecoord: 4..56
score: 4.5
IPR012716T-complex protein 1, beta subunitPANTHERPTHR11353:SF23CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPBcoord: 5..58
score: 4.2

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420903 ID=GR420903; Name=GR420903; organism=Cicer arietinum; type=EST; length=466bp
CATGGAAATGACACAACTTGGGGAAATATTTGAAGGAGTCGAGATACCGT
ATATATAAAGAAACATATCTAAAAACGTGAGGACTGAAAAACAATGTTTT
TCTCAGTAAATAAAAAACACATGTTAATTTAAACTACCACCAATTATGTG
GTCATTTTGGTTGCTGTGATTCCCCAAATTGAAAATTTCAGGAATACCCC
AAAAATTGGCATTGCAATACAAGCATCTGAAGTTGGATGATCCTGTCTTC
TCTCCTTGACAAAATTATTACACAAGTTACAATTTCATCAACTCCTTGGA
GCACTAAGGATCATCTCACCGGCCTCTGTTGCAAATAGTAATACAGCCTG
CTTGACTTTGAATGCTTCACAAATCCCACGTTCAGCCATGTCTCCAACAA
AACCAAATATGACATCGATTCCAGTGGTACATCCCTCATTCTGGTGCTCT
GCAGCTGACGGAAAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0044267cellular protein metabolic process
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR002423Cpn60/GroEL/TCP-1
IPR012716Chap_CCT_beta