GR421005
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR421005 vs. TrEMBL
Match: B7FK89_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.595e-16 Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375 ++QMSF + ++ ICGVTKRGG GLDPSVILDMVSVAK VSEQLINKLDSEIAFAEAEDES Sbjct: 222 ESQMSFTVSISINRQGHICGVTKRGGA----GLDPSVILDMVSVAKHVSEQLINKLDSEIAFAEAEDES 286
BLAST of GR421005 vs. TrEMBL
Match: B7FKE6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.117e-14 Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375 ++QMS A + ++ ICGVTKRGG GLDPSVILDMVSVAK VSEQLINKLDSEIA AEAEDES Sbjct: 222 ESQMSSAVSISINRQGHICGVTKRGGA----GLDPSVILDMVSVAKHVSEQLINKLDSEIASAEAEDES 286
BLAST of GR421005 vs. TrEMBL
Match: D7SV11_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035933001 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.880e-11 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 184 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDE 375 ++QMS A + VS ICG+ KRGG GLDPSVILDM+SVAK VSEQL+NKLDSEI+ AEA +E Sbjct: 222 ESQMSSAVSVSVSGQGRICGLIKRGGA----GLDPSVILDMISVAKHVSEQLMNKLDSEISAAEAFEE 285
BLAST of GR421005 vs. TrEMBL
Match: B6T4R9_MAIZE (Exosome complex exonuclease RRP42 OS=Zea mays PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.855e-10 Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375 ++QMS A + V+ ICG+TKRGG GLDPSVI DM+SVAK VS+Q I+ LDSEIA AEAE+E+ Sbjct: 222 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 286
BLAST of GR421005 vs. TrEMBL
Match: B4G0W6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.855e-10 Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375 ++QMS A + V+ ICG+TKRGG GLDPSVI DM+SVAK VS+Q I+ LDSEIA AEAE+E+ Sbjct: 222 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 286
BLAST of GR421005 vs. TrEMBL
Match: D7L711_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_671605 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.422e-10 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 184 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDE 375 ++QMS A + V+ ICG+TKRGG GLDPSVILDM+SVAK V+E L++KLDSEI+ AEA D+ Sbjct: 222 ESQMSSAVSISVNRAGHICGLTKRGGS----GLDPSVILDMISVAKHVTENLMSKLDSEISAAEAADD 285
BLAST of GR421005 vs. TrEMBL
Match: B9SW53_RICCO (Exosome complex exonuclease rrp42, putative OS=Ricinus communis GN=RCOM_0347880 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.131e-10 Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = -1 Query: 181 ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEA-EDES 336 ICG+TKRGG G+DPSVI D++SVA+ +SEQLINKLDSEIA AEA EDES Sbjct: 239 ICGLTKRGGA----GIDPSVISDIISVAQHISEQLINKLDSEIAAAEAGEDES 287
BLAST of GR421005 vs. TrEMBL
Match: B6TKK3_MAIZE (Exosome complex exonuclease RRP42 OS=Zea mays PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.131e-10 Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375 ++QMS A + V+ ICG+TKRGG GLDPSVI DM+SVAK VS+Q I+ LDSEIA AEAE E+ Sbjct: 222 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEKEA 286
BLAST of GR421005 vs. TrEMBL
Match: C0P926_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.396e-10 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375 ++QMS A + V+ ICG+TKRGG GLDP VI DM+SVAK VS+Q I+ LDSEIA AEAE+E+ Sbjct: 128 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPGVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 192
BLAST of GR421005 vs. TrEMBL
Match: B9IAS5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_834971 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.047e-10 Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 184 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDE 375 ++QMS A + +S ICG++KRG GLDPSVI DM+SVA+ +SEQLINKLDSEI+ AEA+++ Sbjct: 222 ESQMSSAVSVSISRKGQICGLSKRGSA----GLDPSVISDMISVARHISEQLINKLDSEISAAEADED 285
BLAST of GR421005 vs. TAIR peptide
Match: AT3G07750.2 (| Symbols: | 3'-5'-exoribonuclease family protein | chr3:2473486-2475218 FORWARD LENGTH=286) HSP 1 Score: 66.2402 bits (160), Expect = 7.202e-12 Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEA-EDES 375 ++QMS A + V+ ICG+TKR G GLDPSVILDM+SVAK V+E L++KLDSEI+ AEA EDES Sbjct: 221 ESQMSSAVSISVNRTGHICGLTKRSGS----GLDPSVILDMISVAKHVTETLMSKLDSEISAAEACEDES 286
BLAST of GR421005 vs. TAIR peptide
Match: AT3G07750.1 (| Symbols: | 3'-5'-exoribonuclease family protein | chr3:2473486-2475218 FORWARD LENGTH=286) HSP 1 Score: 66.2402 bits (160), Expect = 7.202e-12 Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = -1 Query: 181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEA-EDES 375 ++QMS A + V+ ICG+TKR G GLDPSVILDM+SVAK V+E L++KLDSEI+ AEA EDES Sbjct: 221 ESQMSSAVSISVNRTGHICGLTKRSGS----GLDPSVILDMISVAKHVTETLMSKLDSEISAAEACEDES 286 The following BLAST results are available for this feature:
BLAST of GR421005 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR421005 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR421005 ID=GR421005; Name=GR421005; organism=Cicer arietinum; type=EST; length=420bpback to top |