GR421005

EST Overview
NameGR421005
Unique NameGR421005
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length420
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR421005 vs. TrEMBL
Match: B7FK89_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.595e-16
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375
            ++QMSF   + ++    ICGVTKRGG     GLDPSVILDMVSVAK VSEQLINKLDSEIAFAEAEDES
Sbjct:  222 ESQMSFTVSISINRQGHICGVTKRGGA----GLDPSVILDMVSVAKHVSEQLINKLDSEIAFAEAEDES 286          
BLAST of GR421005 vs. TrEMBL
Match: B7FKE6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.117e-14
Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375
            ++QMS A  + ++    ICGVTKRGG     GLDPSVILDMVSVAK VSEQLINKLDSEIA AEAEDES
Sbjct:  222 ESQMSSAVSISINRQGHICGVTKRGGA----GLDPSVILDMVSVAKHVSEQLINKLDSEIASAEAEDES 286          
BLAST of GR421005 vs. TrEMBL
Match: D7SV11_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035933001 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.880e-11
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = -1
Query:  184 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDE 375
            ++QMS A  + VS    ICG+ KRGG     GLDPSVILDM+SVAK VSEQL+NKLDSEI+ AEA +E
Sbjct:  222 ESQMSSAVSVSVSGQGRICGLIKRGGA----GLDPSVILDMISVAKHVSEQLMNKLDSEISAAEAFEE 285          
BLAST of GR421005 vs. TrEMBL
Match: B6T4R9_MAIZE (Exosome complex exonuclease RRP42 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.855e-10
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375
            ++QMS A  + V+    ICG+TKRGG     GLDPSVI DM+SVAK VS+Q I+ LDSEIA AEAE+E+
Sbjct:  222 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 286          
BLAST of GR421005 vs. TrEMBL
Match: B4G0W6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.855e-10
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375
            ++QMS A  + V+    ICG+TKRGG     GLDPSVI DM+SVAK VS+Q I+ LDSEIA AEAE+E+
Sbjct:  222 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 286          
BLAST of GR421005 vs. TrEMBL
Match: D7L711_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_671605 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.422e-10
Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = -1
Query:  184 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDE 375
            ++QMS A  + V+    ICG+TKRGG     GLDPSVILDM+SVAK V+E L++KLDSEI+ AEA D+
Sbjct:  222 ESQMSSAVSISVNRAGHICGLTKRGGS----GLDPSVILDMISVAKHVTENLMSKLDSEISAAEAADD 285          
BLAST of GR421005 vs. TrEMBL
Match: B9SW53_RICCO (Exosome complex exonuclease rrp42, putative OS=Ricinus communis GN=RCOM_0347880 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.131e-10
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = -1
Query:  181 ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEA-EDES 336
            ICG+TKRGG     G+DPSVI D++SVA+ +SEQLINKLDSEIA AEA EDES
Sbjct:  239 ICGLTKRGGA----GIDPSVISDIISVAQHISEQLINKLDSEIAAAEAGEDES 287          
BLAST of GR421005 vs. TrEMBL
Match: B6TKK3_MAIZE (Exosome complex exonuclease RRP42 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.131e-10
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375
            ++QMS A  + V+    ICG+TKRGG     GLDPSVI DM+SVAK VS+Q I+ LDSEIA AEAE E+
Sbjct:  222 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEKEA 286          
BLAST of GR421005 vs. TrEMBL
Match: C0P926_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.396e-10
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDES 375
            ++QMS A  + V+    ICG+TKRGG     GLDP VI DM+SVAK VS+Q I+ LDSEIA AEAE+E+
Sbjct:  128 ESQMSSAVSVSVNRHGQICGLTKRGGA----GLDPGVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 192          
BLAST of GR421005 vs. TrEMBL
Match: B9IAS5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_834971 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.047e-10
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = -1
Query:  184 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEAEDE 375
            ++QMS A  + +S    ICG++KRG      GLDPSVI DM+SVA+ +SEQLINKLDSEI+ AEA+++
Sbjct:  222 ESQMSSAVSVSISRKGQICGLSKRGSA----GLDPSVISDMISVARHISEQLINKLDSEISAAEADED 285          
BLAST of GR421005 vs. TAIR peptide
Match: AT3G07750.2 (| Symbols: | 3'-5'-exoribonuclease family protein | chr3:2473486-2475218 FORWARD LENGTH=286)

HSP 1 Score: 66.2402 bits (160), Expect = 7.202e-12
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEA-EDES 375
            ++QMS A  + V+    ICG+TKR G     GLDPSVILDM+SVAK V+E L++KLDSEI+ AEA EDES
Sbjct:  221 ESQMSSAVSISVNRTGHICGLTKRSGS----GLDPSVILDMISVAKHVTETLMSKLDSEISAAEACEDES 286          
BLAST of GR421005 vs. TAIR peptide
Match: AT3G07750.1 (| Symbols: | 3'-5'-exoribonuclease family protein | chr3:2473486-2475218 FORWARD LENGTH=286)

HSP 1 Score: 66.2402 bits (160), Expect = 7.202e-12
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = -1
Query:  181 DAQMSFASLLIVS----ICGVTKRGGRRRIMGLDPSVILDMVSVAKLVSEQLINKLDSEIAFAEA-EDES 375
            ++QMS A  + V+    ICG+TKR G     GLDPSVILDM+SVAK V+E L++KLDSEI+ AEA EDES
Sbjct:  221 ESQMSSAVSISVNRTGHICGLTKRSGS----GLDPSVILDMISVAKHVTETLMSKLDSEISAAEACEDES 286          
The following BLAST results are available for this feature:
BLAST of GR421005 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FK89_MEDTR8.595e-1672.46Putative uncharacterized protein OS=Medicago trunc... [more]
B7FKE6_MEDTR2.117e-1471.01Putative uncharacterized protein OS=Medicago trunc... [more]
D7SV11_VITVI4.880e-1163.24Whole genome shotgun sequence of line PN40024, sca... [more]
B6T4R9_MAIZE1.855e-1059.42Exosome complex exonuclease RRP42 OS=Zea mays PE=2... [more]
B4G0W6_MAIZE1.855e-1059.42Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
D7L711_ARALY2.422e-1058.82Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B9SW53_RICCO4.131e-1071.70Exosome complex exonuclease rrp42, putative OS=Ric... [more]
B6TKK3_MAIZE4.131e-1059.42Exosome complex exonuclease RRP42 OS=Zea mays PE=2... [more]
C0P926_MAIZE5.396e-1057.97Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B9IAS5_POPTR7.047e-1055.88Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
BLAST of GR421005 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G07750.27.202e-1260.00| Symbols: | 3'-5'-exoribonuclease family protein... [more]
AT3G07750.17.202e-1260.00| Symbols: | 3'-5'-exoribonuclease family protein... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 7..18
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR421005 ID=GR421005; Name=GR421005; organism=Cicer arietinum; type=EST; length=420bp
AAAGTTCAACCAATATAGCTCAAAGTACTTCAAACCCTGCACAACTCAAA
AGACAAAAGTTAATGACATAACCAAACAATCCTACTTACACGAGCTCAAG
TCAACCAACTACAAAAAGTGTCCTTAAAAATCAACACATCCTAGTGATCT
AGTGTAACTAAGTTGAAAATTCTTATGTTATGACTCATCTTCAGCTTCAG
CAAAAGCTATTTCTGAATCCAATTTGTTTATTAACTGCTCGCTTACAAGC
TTAGCCACGGATACCATATCAAGAATGACACTTGGATCGAGCCCCATGAT
TCTTCTTCTGCCTCCTCGTTTGGTTACACCACATATAGAAACGATTAATA
AAGATGCAAAACTCATTTGGGCATCCACAAATGTGTACCCTTGTCTCAAC
CTTAGTAATATAGTGCTTCC
back to top