GR393147
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393147 vs. SwissProt
Match: RL38_ARATH (60S ribosomal protein L38 OS=Arabidopsis thaliana GN=RPL38A PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.223e-26 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_SOLLC (60S ribosomal protein L38 OS=Solanum lycopersicum GN=RPL38 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.220e-24 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_BRABE (60S ribosomal protein L38 OS=Branchiostoma belcheri GN=RPL38 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.948e-22 Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_RAT (60S ribosomal protein L38 OS=Rattus norvegicus GN=Rpl38 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.109e-20 Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_MOUSE (60S ribosomal protein L38 OS=Mus musculus GN=Rpl38 PE=2 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 3.109e-20 Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_MACFA (60S ribosomal protein L38 OS=Macaca fascicularis GN=RPL38 PE=3 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 3.109e-20 Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_HUMAN (60S ribosomal protein L38 OS=Homo sapiens GN=RPL38 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.109e-20 Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_BOVIN (60S ribosomal protein L38 OS=Bos taurus GN=RPL38 PE=3 SV=4) HSP 1 Score: 97.0561 bits (240), Expect = 3.109e-20 Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
BLAST of GR393147 vs. SwissProt
Match: RL38_ORNPR (60S ribosomal protein L38 OS=Ornithodoros parkeri GN=RpL38 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.910e-18 Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKD-VVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQ+ EIKDFLLTARRKDA+SV+IK++ D V KFKVRCSKYLYT+ V + EKA+KLKQSL Sbjct: 1 MPKQLKEIKDFLLTARRKDAKSVRIKKNPDNVTKFKVRCSKYLYTIVVKEKEKAEKLKQSL 61
BLAST of GR393147 vs. SwissProt
Match: RL38_LYSTE (60S ribosomal protein L38 OS=Lysiphlebus testaceipes GN=RpL38 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.910e-18 Identity = 43/60 (71.67%), Postives = 54/60 (90.00%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MP++I EIKDFL+TARRKDA+SVKIK++ + VKFKVRCS++LYTL + D EKA+KLKQSL Sbjct: 1 MPREIKEIKDFLVTARRKDAKSVKIKKNAENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: D7U1W4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_102.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010854001 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.533e-25 Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 2 Query: 80 TMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 T PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 27 TPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDAEKADKLKQSL 87
BLAST of GR393147 vs. TrEMBL
Match: D7SPL7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019051001 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.533e-25 Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 59 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 118
BLAST of GR393147 vs. TrEMBL
Match: C6T0S7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.533e-25 Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: A9PDL5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.615e-25 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKD VKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDAVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: C6SWA8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.416e-25 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: C5YH95_SORBI (Putative uncharacterized protein Sb07g025470 OS=Sorghum bicolor GN=Sb07g025470 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.416e-25 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKA+KLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDAEKANKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: B9T6H4_RICCO (60S ribosomal protein L38, putative OS=Ricinus communis GN=RCOM_1205980 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.416e-25 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 +PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 28 LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 87
BLAST of GR393147 vs. TrEMBL
Match: B6SPK5_MAIZE (60S ribosomal protein L38 OS=Zea mays PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.416e-25 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKA+KLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDAEKANKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: B4FHI7_MAIZE (60S ribosomal protein L38 OS=Zea mays PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.416e-25 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKA+KLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDAEKANKLKQSL 60
BLAST of GR393147 vs. TrEMBL
Match: A9P978_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_567190 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.416e-25 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
BLAST of GR393147 vs. TAIR peptide
Match: AT3G59540.1 (| Symbols: | Ribosomal L38e protein family | chr3:21995897-21996742 REVERSE LENGTH=69) HSP 1 Score: 117.472 bits (293), Expect = 1.738e-27 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
BLAST of GR393147 vs. TAIR peptide
Match: AT2G43460.1 (| Symbols: | Ribosomal L38e protein family | chr2:18046285-18047292 REVERSE LENGTH=69) HSP 1 Score: 117.472 bits (293), Expect = 1.738e-27 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 83 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSL 262 MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60 The following BLAST results are available for this feature:
BLAST of GR393147 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR393147 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR393147 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393147 ID=GR393147; Name=GR393147; organism=Cicer arietinum; type=EST; length=263bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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