GR420856

EST Overview
NameGR420856
Unique NameGR420856
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length347
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
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BLAST of GR420856 vs. TrEMBL
Match: C6T2Q1_SOYBN (50S ribosomal protein L34 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-10
Identity = 38/74 (51.35%), Postives = 45/74 (60.81%), Query Frame = -1 
Query:   96 LGLTFNFGARRHNGRGCVGAGVARSAFCLTKRSKSLRSRTQHAGFRKRMSTPNGLF*RGCQGVDGRKVLCTKTH 317
            L LT NFG RR  G G V     ++A CLTKRS+S +S  +  GFRKRMSTP G      +   GR+ LCTKTH
Sbjct:   69 LDLTSNFGTRRGKGSGLV-VRAGKAALCLTKRSRSRKSLARTHGFRKRMSTPGGRAVLRRRRAKGRRALCTKTH 141
[Close]
BLAST of GR420856 vs. TrEMBL
Match: C6T1Q9_SOYBN (50S ribosomal protein L34 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.175e-9
Identity = 37/74 (50.00%), Postives = 45/74 (60.81%), Query Frame = -1 
Query:   96 LGLTFNFGARRHNGRGCVGAGVARSAFCLTKRSKSLRSRTQHAGFRKRMSTPNGLF*RGCQGVDGRKVLCTKTH 317
            L LT N G +R  G G V     ++A CLTKRS+S +S  +  GFRKRMSTP G      +   GR+VLCTKTH
Sbjct:   69 LDLTSNVGTKRGKGSGLV-VRAGKAALCLTKRSRSRKSLARTHGFRKRMSTPGGRAVLRRRRAKGRRVLCTKTH 141
[Close]
BLAST of GR420856 vs. TrEMBL
Match: B9I1N1_POPTR (50S ribosomal protein L34 (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_235374 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.458e-7
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = -1 
Query:   96 LGLTFNFGARRHNGRGCVGAGVARSAFCLTKRSKSLRSRTQHAGFRKRMSTPNGLF*RGCQGVDGRKVLCTKTH 317
            L L  N G R+  GRG V     ++A CLTKRS+S +S  +  GFR+RM T +G      +   GRKVLCTK++
Sbjct:   54 LDLNSNIGVRKDIGRGLV-VRAGKAALCLTKRSRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGRKVLCTKSN 126
The following BLAST results are available for this feature:
BLAST of GR420856 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C6T2Q1_SOYBN2.367e-1051.3550S ribosomal protein L34 OS=Glycine max PE=2 SV=1[more]
C6T1Q9_SOYBN1.175e-950.0050S ribosomal protein L34 OS=Glycine max PE=2 SV=1[more]
B9I1N1_POPTR5.458e-744.5950S ribosomal protein L34 (Fragment) OS=Populus tr... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420856 ID=GR420856; Name=GR420856; organism=Cicer arietinum; type=EST; length=347bp
GCTTGAAAAAGTTAAATACATATACAAAATGAATCAGTTATGCATAAAAG
TAAAATAATTGTGGTGACTATTATGCCCTTTATTTGTTGCCACTAGTGGG
TCTTAGTGCAAAGGACTTTGCGTCCGTCAACCCCTTGGCACCCTCTTTAA
AATAGTCCATTTGGTGTGCTCATTCGTTTGCGAAAGCCAGCGTGCTGAGT
TCGTGATCTCAATGATTTGCTTCTCTTGGTTAAACAAAAAGCACTCCTTG
CTACGCCTGCACCAACACAACCACGGCCATTGTGTCTTCTAGCCCCAAAA
TTAAATGTTAGTCCCAAATCCCTGAAAGGGTAGTGACAACAAAAAAA
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