GR395930

EST Overview
NameGR395930
Unique NameGR395930
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length670
Libraries
Library NameType
LIBEST_024781 ICC4958 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR395930 vs. TrEMBL
Match: C9SK60_VERA1 (Transport protein SEC31 OS=Verticillium albo-atrum (strain VaMs.102) GN=VDBG_05187 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.095e-7
Identity = 39/117 (33.33%), Postives = 52/117 (44.44%), Query Frame = 2 
Query:  230 RPNST*IQTGSPGNPVEVHTPSPPSRWNQNT--GVTPRAKPQQNSAPPPGHPFGEGTTGWQPHSGDSLEPPQNPVRNNGPTPISGVKG*PPPNARPLPAGSQ*WNAPETA*KRATAP 574
            RP    +  G+P  P   + PSP ++       G  P A P   SAPPP +P+    +   P S  +  P Q P + +GP P     G PPP+A P P G      P     RA+AP
Sbjct:  796 RPYGCSLPGGAP--PSNRYAPSPAAQQTNQPPQGPVPSAGPPLGSAPPPRNPYAPPPSAGTPQSQYAPSPYQAPPQASGPPPTGPPPGGPPPSAGPPPGGPPAGARPTPPPPRASAP 910
The following BLAST results are available for this feature:
BLAST of GR395930 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C9SK60_VERA14.095e-733.33Transport protein SEC31 OS=Verticillium albo-atrum... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 40..54
score: NAcoord: 69..81
score
NoneNo IPR availableSEGsegsegcoord: 149..167
score
NoneNo IPR availableSEGsegsegcoord: 3..16
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR395930 ID=GR395930; Name=GR395930; organism=Cicer arietinum; type=EST; length=670bp
CTTTTTGTGGGAGAAACCCGCGTTTGCCAAAGTTCCGACTGAAAATGCGA
CAGATACCGCGAAGAACTATTGTACACATACCGCAGATGGTAAGCGGGCG
TGACCCCCTCTGGGTTGCTCAGAGATGGGGCCAATCCTCCCGAAGGGGCT
CCCCCCGATCGCCGCTAAAAAGAGCAGGCAACCCCCCTTTTGCCAAAGCG
CCAGAACCGGCCGGTCCTGGCAGAGCAATCGCCCGAATTCGACGTAAATC
CAAACCGGGTCCCCAGGGAACCCGGTGGAAGTCCACACCCCCAGCCCACC
GAGCCGGTGGAATCAAAACACCGGGGTGACCCCCCGGGCTAAACCACAGC
AAAATAGTGCGCCCCCACCGGGCCACCCTTTCGGAGAGGGCACCACGGGG
TGGCAGCCTCATTCTGGGGACTCCCTTGAGCCCCCCCAGAATCCTGTCCG
GAATAATGGGCCCACACCGATCTCCGGGGTGAAAGGGTAGCCCCCCCCTA
ATGCCCGACCGCTCCCAGCCGGAAGCCAATAGTGGAACGCCCCAGAGACG
GCATAAAAGCGGGCAACAGCTCCCTACTCTTGGCGTGGACTCCCACGGCC
AGCCAACCAGTCCGGGGACCCCTGAGTCGCCACACAGCCAATACAGTATG
GGACCAAACCCGCGTGGAAG
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