GR914636

EST Overview
NameGR914636
Unique NameGR914636
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length357
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
KEGG analysis for Cicer arietinum unigene v12011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR914636 vs. TrEMBL
Match: C6TKW5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 9.086e-50
Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            GSLKAEVTIKVRAEFNSSINANTVLVQMPLP+FT+RV FELEPGAVGHTTDF+EANKRLEWGLKKVVG SEHTLRAKLTFSQELHGNIMKEAGP+SMTFT+PMY
Sbjct:  302 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPSFTSRVTFELEPGAVGHTTDFKEANKRLEWGLKKVVGGSEHTLRAKLTFSQELHGNIMKEAGPVSMTFTVPMY 405          
BLAST of GR914636 vs. TrEMBL
Match: B7FLE7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 9.086e-50
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G LKAEVTIKVRAEFNSSINANTVLV+MPLP FTARVNFELEPGAVGHTTDF+EANK+LEWGLKKVVG SEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY
Sbjct:  301 GPLKAEVTIKVRAEFNSSINANTVLVRMPLPAFTARVNFELEPGAVGHTTDFKEANKKLEWGLKKVVGGSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 404          
BLAST of GR914636 vs. TrEMBL
Match: B9GN34_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816388 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.660e-43
Identity = 85/104 (81.73%), Postives = 95/104 (91.35%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G+LKAEV +KV AEF SSI ANT++VQMPLP +T RVNFELEPGA+G TTDF+EAN+RLEWGLKK+VG SEHTLRAKLTFSQELHGNI KEAGP+SMTFTIPMY
Sbjct:  305 GALKAEVILKVSAEFPSSITANTIIVQMPLPKYTTRVNFELEPGALGQTTDFKEANRRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITKEAGPVSMTFTIPMY 408          
BLAST of GR914636 vs. TrEMBL
Match: B9R7Z0_RICCO (AP-4 complex subunit mu-1, putative OS=Ricinus communis GN=RCOM_1595530 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.113e-39
Identity = 77/104 (74.04%), Postives = 93/104 (89.42%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G LKAEV +KVRAEF SSI ANTVL+++PLP +T+RV FELEPGAVG TTDF+E++K++EWGLKK+VG SEHT+RAKLTFSQ +HGNI KEAGP++MTF IPMY
Sbjct:  331 GQLKAEVIVKVRAEFPSSITANTVLIEVPLPAYTSRVTFELEPGAVGVTTDFKESSKKIEWGLKKIVGGSEHTVRAKLTFSQAMHGNITKEAGPVNMTFIIPMY 434          
BLAST of GR914636 vs. TrEMBL
Match: B8LM66_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.454e-39
Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 3
Query:    9 AAARAGGSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            A     GSLKAEV +KVRA+F+SSI ANTV +QMPLP +T RV+F+LEPGAVG TTDF+E NK LEWGL+K+VG SEHTLRAKLTFSQE + NI KE+GP+SMTFTIPMY
Sbjct:  304 ALIEEAGSLKAEVMLKVRADFSSSITANTVALQMPLPKYTTRVSFDLEPGAVGQTTDFKEGNKMLEWGLRKIVGGSEHTLRAKLTFSQETNMNITKESGPVSMTFTIPMY 413          
BLAST of GR914636 vs. TrEMBL
Match: B9RJW2_RICCO (AP-4 complex subunit mu-1, putative OS=Ricinus communis GN=RCOM_1039340 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.480e-39
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G+LKAEV +K+ AEF SSI ANT+ +QM LP +T R  FELEPG  G T DF+EANK+LEWGLKK+VG SEHTLRAKLTFSQELHGNI KEAGP+SMTFTIPMY
Sbjct:  280 GALKAEVILKISAEFPSSITANTINIQMSLPKYTTRATFELEPGVFGQTADFKEANKKLEWGLKKIVGGSEHTLRAKLTFSQELHGNITKEAGPVSMTFTIPMY 383          
BLAST of GR914636 vs. TrEMBL
Match: Q9SB50_ARATH (Clathrin coat assembly like protein OS=Arabidopsis thaliana GN=F22K18.250 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.525e-39
Identity = 78/104 (75.00%), Postives = 87/104 (83.65%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G LKAEV IK+RAEF S I ANT+ VQMPLP +T+R +FELEPGA G  TDF+E+NK LEW LKK+VG  EHTLRAKLTFSQE HGNI KEAGP+SMTFTIPMY
Sbjct:  310 GRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDFKESNKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMY 413          
BLAST of GR914636 vs. TrEMBL
Match: D7M8T1_ARALY (Clathrin adaptor complexes medium subunit family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914132 PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.099e-38
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G LKAEV IK+RAEF S I ANT+ VQMPLP +T+R +FELEPGA G  TDF+E++K LEW LKK+VG  EHTLRAKLTFSQE HGNI KEAGP+SMTFTIPMY
Sbjct:  310 GRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQKTDFKESSKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMY 413          
BLAST of GR914636 vs. TrEMBL
Match: C6TBX2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.677e-38
Identity = 79/110 (71.82%), Postives = 90/110 (81.82%), Query Frame = 3
Query:    9 AAARAGGSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            A     GSLKAEV +KV AEF SS+ ANT+ VQMPLP  T+RV+FELEPGAVG TTDF+EANKRLEW L+K+VG SEHTL AKLTF QE H NI KE+GP+SMTFTIPM+
Sbjct:  304 ALIEEAGSLKAEVILKVSAEFPSSVTANTIKVQMPLPKCTSRVSFELEPGAVGQTTDFKEANKRLEWSLRKIVGGSEHTLHAKLTFFQESHVNITKESGPVSMTFTIPMH 413          
BLAST of GR914636 vs. TrEMBL
Match: Q7XI39_ORYSJ (Os07g0620300 protein OS=Oryza sativa subsp. japonica GN=P0594D10.112 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.566e-36
Identity = 69/110 (62.73%), Postives = 91/110 (82.73%), Query Frame = 3
Query:    9 AAARAGGSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            A     G  +AEV +K+RA+F++++ ANT++VQMP+P++T R +FELE GAVG TTDF+E ++R+EW LKK+VG SEHTLRAKLTFSQE HGN+ KEAGP++M FTIPMY
Sbjct:  304 ALIEEAGPSRAEVLLKIRADFSANVTANTIVVQMPVPSYTMRASFELEAGAVGQTTDFKEGSRRIEWNLKKIVGGSEHTLRAKLTFSQESHGNLTKEAGPVNMNFTIPMY 413          
BLAST of GR914636 vs. TAIR peptide
Match: AT4G24550.2 (| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678903 FORWARD LENGTH=451)

HSP 1 Score: 163.696 bits (413), Expect = 2.074e-41
Identity = 78/104 (75.00%), Postives = 87/104 (83.65%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G LKAEV IK+RAEF S I ANT+ VQMPLP +T+R +FELEPGA G  TDF+E+NK LEW LKK+VG  EHTLRAKLTFSQE HGNI KEAGP+SMTFTIPMY
Sbjct:  310 GRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDFKESNKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMY 413          
BLAST of GR914636 vs. TAIR peptide
Match: AT4G24550.3 (| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678689 FORWARD LENGTH=385)

HSP 1 Score: 98.2117 bits (243), Expect = 1.070e-21
Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVV 227
            G LKAEV IK+RAEF S I ANT+ VQMPLP +T+R +FELEPGA G  TDF+E+NK LEW LKKV+
Sbjct:  310 GRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDFKESNKMLEWNLKKVI 376          
BLAST of GR914636 vs. TAIR peptide
Match: AT4G24550.1 (| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678526 FORWARD LENGTH=380)

HSP 1 Score: 95.5153 bits (236), Expect = 6.938e-21
Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKK 221
            G LKAEV IK+RAEF S I ANT+ VQMPLP +T+R +FELEPGA G  TDF+E+NK LEW LKK
Sbjct:  310 GRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDFKESNKMLEWNLKK 374          
BLAST of GR914636 vs. TAIR peptide
Match: AT5G46630.2 (| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923060 FORWARD LENGTH=441)

HSP 1 Score: 52.373 bits (124), Expect = 6.735e-8
Identity = 29/104 (27.88%), Postives = 53/104 (50.96%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G  + EV +KV++ F + + A  V+V++P+P  TA+ NF++  G       +  +   L W ++K  G +E TL A++     +         P+ M F +PM+
Sbjct:  302 GRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG----RAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMF 401          
BLAST of GR914636 vs. TAIR peptide
Match: AT5G46630.1 (| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923252 FORWARD LENGTH=438)

HSP 1 Score: 52.373 bits (124), Expect = 6.735e-8
Identity = 29/104 (27.88%), Postives = 53/104 (50.96%), Query Frame = 3
Query:   27 GSLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFREANKRLEWGLKKVVGSSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMY 338
            G  + EV +KV++ F + + A  V+V++P+P  TA+ NF++  G       +  +   L W ++K  G +E TL A++     +         P+ M F +PM+
Sbjct:  302 GRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG----RAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMF 401          
The following BLAST results are available for this feature:
BLAST of GR914636 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TKW5_SOYBN9.086e-5093.27Putative uncharacterized protein OS=Glycine max PE... [more]
B7FLE7_MEDTR9.086e-5094.23Putative uncharacterized protein OS=Medicago trunc... [more]
B9GN34_POPTR1.660e-4381.73Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R7Z0_RICCO1.113e-3974.04AP-4 complex subunit mu-1, putative OS=Ricinus com... [more]
B8LM66_PICSI1.454e-3972.73Putative uncharacterized protein OS=Picea sitchens... [more]
B9RJW2_RICCO2.480e-3975.00AP-4 complex subunit mu-1, putative OS=Ricinus com... [more]
Q9SB50_ARATH5.525e-3975.00Clathrin coat assembly like protein OS=Arabidopsis... [more]
D7M8T1_ARALY2.099e-3874.04Clathrin adaptor complexes medium subunit family p... [more]
C6TBX2_SOYBN4.677e-3871.82Putative uncharacterized protein OS=Glycine max PE... [more]
Q7XI39_ORYSJ2.566e-3662.73Os07g0620300 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of GR914636 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G24550.22.074e-4175.00| Symbols: | Clathrin adaptor complexes medium su... [more]
AT4G24550.31.070e-2168.66| Symbols: | Clathrin adaptor complexes medium su... [more]
AT4G24550.16.938e-2169.23| Symbols: | Clathrin adaptor complexes medium su... [more]
AT5G46630.26.735e-827.88| Symbols: | Clathrin adaptor complexes medium su... [more]
AT5G46630.16.735e-827.88| Symbols: | Clathrin adaptor complexes medium su... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008968Clathrin adaptor, mu subunit, C-terminalPFAMPF00928Adap_comp_subcoord: 10..112
score: 3
IPR008968Clathrin adaptor, mu subunit, C-terminalPROFILEPS51072MHDcoord: 1..118
score: 17
IPR008968Clathrin adaptor, mu subunit, C-terminalSUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 12..113
score: 1.9
NoneNo IPR availableGENE3D2.60.40.1170no descriptioncoord: 9..112
score: 6.5
NoneNo IPR availablePANTHERPTHR11998CLATHRIN COAT ASSEMBLY PROTEINcoord: 9..112
score: 8.8
NoneNo IPR availablePANTHERPTHR11998:SF13CLATHRIN COAT ASSEMBLY PROTEIN AP-4coord: 9..112
score: 8.8

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR914636 ID=GR914636; Name=GR914636; organism=Cicer arietinum; type=EST; length=357bp
GATTTCGAGCGGCCGCCCGGGCAGGTGGATCACTCAAGGCTGAAGTGACC
ATTAAAGTGCGAGCTGAATTCAACTCAAGCATCAATGCTAACACTGTTCT
TGTACAGATGCCACTTCCAACATTCACAGCTCGTGTTAATTTTGAGTTAG
AACCTGGAGCAGTTGGACACACAACTGATTTTAGGGAAGCAAATAAAAGA
CTGGAATGGGGACTCAAAAAGGTTGTCGGTAGCTCTGAACATACTTTACG
TGCAAAGCTGACGTTTTCACAGGAGTTACATGGAAATATCATGAAAGAAG
CAGGGCCTCTTAGCATGACATTTACGATACCTATGTACCTCGGCCGCGAC
CACGCTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
Vocabulary: INTERPRO
TermDefinition
IPR008968Clathrin adaptor, mu subunit, C-terminal