GR409530

EST Overview
NameGR409530
Unique NameGR409530
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length706
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR409530 vs. TrEMBL
Match: Q2PF39_TRIPR (Aminoacyl-tRNA synthetase OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.459e-29
Identity = 74/123 (60.16%), Postives = 81/123 (65.85%), Query Frame = -1
Query:  332 ETEFIKPKKSNASADHSDPGENEN--------GXXXXXXXXXXXXXXXXXXMKVDEPVSVPSHAVEENEQNQPP--EKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDNDY 670
            ETEF KP KSNASADHSD  ENEN        G                  MKV+EPVSVP   VEE  ++Q    E+  SPPG +EVEGTGKRRFLDLNELAPSPGFDDGP+TI+KDEDNDY
Sbjct:  623 ETEFTKPGKSNASADHSDASENENEKQNENENGEYVMESEESDSIEDEDQTMKVEEPVSVPYPVVEEENEDQKMKVEEPVSPPGQDEVEGTGKRRFLDLNELAPSPGFDDGPNTIVKDEDNDY 745          
BLAST of GR409530 vs. TrEMBL
Match: B9I325_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_661912 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.048e-19
Identity = 61/114 (53.51%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  332 ETEFIKPKKSNASADHSDPGENENGXXXXXXXXXXXXXXXXXXMKVDEPVSVPSHAVEENEQNQPPEKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDED-NDY 670
            ETE IK +KSNAS +HSD  EN                     MKVD+PV   +  +   EQNQPPE+S+SP   EEVEG  KRRFLDLNELAP  GFDD P+T+MKDED ND+
Sbjct:  142 ETESIKREKSNASDEHSDASENGE-YSARSQSGDSDGNDDEQNMKVDQPVEGDT-VIAREEQNQPPEESNSPV-QEEVEGVRKRRFLDLNELAPGSGFDDSPNTVMKDEDRNDF 252          
BLAST of GR409530 vs. TrEMBL
Match: B9R920_RICCO (tRNA ligase, putative OS=Ricinus communis GN=RCOM_1513140 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.581e-18
Identity = 57/112 (50.89%), Postives = 70/112 (62.50%), Query Frame = -1
Query:  335 ETEFIKPKKSNASADHSDPGENENGXXXXXXXXXXXXXXXXXXMKVDEPVSVPSHAVEENEQNQPPEKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDND 670
            E E +KP KSNAS +++D   +EN                   MKVD PV   + A E+  Q+QPPEKS+SP G +EVEG  KRRFLDLNELAP   FDDGP+T++KDED D
Sbjct:  612 EGESMKPAKSNASDENTDA--SENAEYSAGSQDSDDNDDEEQDMKVDRPVEDYNGATEK-VQSQPPEKSNSP-GQDEVEGVRKRRFLDLNELAPGSSFDDGPNTVLKDEDRD 719          
BLAST of GR409530 vs. TrEMBL
Match: A5C2W7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004978 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.415e-16
Identity = 57/116 (49.14%), Postives = 68/116 (58.62%), Query Frame = -1
Query:  332 ETEFIKPKKSNAS---ADHSDPGENENGXXXXXXXXXXXXXXXXXXMKVDEPVSVPSHAVEENEQNQPPEKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDNDY 670
            ETE +K +KSNAS   +D SD  E   G                   KVD+PV      VE+ E NQP EKS+SP   +E EG  KRRFLDLNELAP  GFDDGP+TI+KD+ ND+
Sbjct:  650 ETESLKQEKSNASDGRSDESDKVEYSMGSQDSDDNDDDQEL------KVDQPVENYPQTVEK-EINQPSEKSNSPV-QDEAEGVRKRRFLDLNELAPGSGFDDGPNTILKDDTNDF 757          
BLAST of GR409530 vs. TrEMBL
Match: D7SII7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008087001 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.372e-11
Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = -1
Query:  332 ETEFIKPKKSNASADHSDPGENENGXXXXXXXXXXXXXXXXXXMKVDEPVSVPSHAVEENEQNQP---PEKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDNDY 670
            ETE +K +KSNAS   SD  +                       KV+   S+ S   ++N+ +Q     +  S+ P  +E EG  KRRFLDLNELAP  GFDDGP+TI+KD+ ND+
Sbjct:  472 ETESLKQEKSNASDGRSDESD-----------------------KVE--YSMGSQDSDDNDDDQELKVDQPKSNSPVQDEAEGVRKRRFLDLNELAPGSGFDDGPNTILKDDTNDF 562          
BLAST of GR409530 vs. TrEMBL
Match: D7KH85_ARALY (Aminoacyl-tRNA synthetase family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472118 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.829e-10
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  341 DEPVSVPSHAVEEN-EQNQPPEKSSSPPGHEEVEGT-GKRRFLDLNELAPSPGFDDGPSTIMKDED 532
            +EP  V  +A   N ++N    KS+     EEVEG  GKRR+LDLNELAP  GFDDGPST++KD+D
Sbjct:  691 EEPREVNDNAETTNGKENNQLNKSNGTTDQEEVEGVVGKRRYLDLNELAPVSGFDDGPSTVLKDDD 756          
BLAST of GR409530 vs. TrEMBL
Match: Q9LMD2_ARATH (F14D16.10 OS=Arabidopsis thaliana GN=At1g18950 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.284e-9
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  341 DEPVSVPSHAVEEN-EQNQPPEKSSSPPGHEEVEGT-GKRRFLDLNELAPSPGFDDGPSTIMKDED 532
            +EP  V  +A   N ++N    KS+     EEVEG  GKRR+LDLNELAP  GFDDGPST++KD+D
Sbjct:  515 EEPRDVNDNADTTNGKENNQLNKSNGTTDQEEVEGVVGKRRYLDLNELAPVSGFDDGPSTVLKDDD 580          
BLAST of GR409530 vs. TrEMBL
Match: Q69WS4_ORYSJ (Putative uncharacterized protein OJ1118_E12.14 OS=Oryza sativa subsp. japonica GN=OJ1118_E12.14 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.393e-8
Identity = 38/76 (50.00%), Postives = 44/76 (57.89%), Query Frame = -1
Query:  335 KVDEPVSVPSHAVEENEQNQPP--------EKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDND 538
            K+DE   +  +  E+ EQ QPP        EK  +P    E+E  G R FLDLNELAP  GFDDGPS  MKDED D
Sbjct:  504 KMDEDHVMVENKEEQEEQPQPPPLPPQQPVEKMEAPS--REIETVG-RTFLDLNELAPGGGFDDGPSLTMKDEDMD 576          
BLAST of GR409530 vs. TrEMBL
Match: Q0D802_ORYSJ (Os07g0193600 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os07g0193600 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.393e-8
Identity = 38/76 (50.00%), Postives = 44/76 (57.89%), Query Frame = -1
Query:  335 KVDEPVSVPSHAVEENEQNQPP--------EKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDND 538
            K+DE   +  +  E+ EQ QPP        EK  +P    E+E  G R FLDLNELAP  GFDDGPS  MKDED D
Sbjct:  518 KMDEDHVMVENKEEQEEQPQPPPLPPQQPVEKMEAPS--REIETVG-RTFLDLNELAPGGGFDDGPSLTMKDEDMD 590          
BLAST of GR409530 vs. TrEMBL
Match: B9FVZ5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_23422 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.393e-8
Identity = 38/76 (50.00%), Postives = 44/76 (57.89%), Query Frame = -1
Query:  335 KVDEPVSVPSHAVEENEQNQPP--------EKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDND 538
            K+DE   +  +  E+ EQ QPP        EK  +P    E+E  G R FLDLNELAP  GFDDGPS  MKDED D
Sbjct:  492 KMDEDHVMVENKEEQEEQPQPPPLPPQQPVEKMEAPS--REIETVG-RTFLDLNELAPGGGFDDGPSLTMKDEDMD 564          
BLAST of GR409530 vs. TAIR peptide
Match: AT1G18950.1 (| Symbols: | DDT domain superfamily | chr1:6546539-6551549 FORWARD LENGTH=750)

HSP 1 Score: 67.3958 bits (163), Expect = 8.727e-12
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  341 DEPVSVPSHAVEEN-EQNQPPEKSSSPPGHEEVEGT-GKRRFLDLNELAPSPGFDDGPSTIMKDED 532
            +EP  V  +A   N ++N    KS+     EEVEG  GKRR+LDLNELAP  GFDDGPST++KD+D
Sbjct:  680 EEPRDVNDNADTTNGKENNQLNKSNGTTDQEEVEGVVGKRRYLDLNELAPVSGFDDGPSTVLKDDD 745          
The following BLAST results are available for this feature:
BLAST of GR409530 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2PF39_TRIPR1.459e-2960.16Aminoacyl-tRNA synthetase OS=Trifolium pratense PE... [more]
B9I325_POPTR1.048e-1953.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R920_RICCO2.581e-1850.89tRNA ligase, putative OS=Ricinus communis GN=RCOM_... [more]
A5C2W7_VITVI2.415e-1649.14Putative uncharacterized protein OS=Vitis vinifera... [more]
D7SII7_VITVI1.372e-1139.66Whole genome shotgun sequence of line PN40024, sca... [more]
D7KH85_ARALY9.829e-1054.55Aminoacyl-tRNA synthetase family OS=Arabidopsis ly... [more]
Q9LMD2_ARATH1.284e-954.55F14D16.10 OS=Arabidopsis thaliana GN=At1g18950 PE=... [more]
Q69WS4_ORYSJ5.393e-850.00Putative uncharacterized protein OJ1118_E12.14 OS=... [more]
Q0D802_ORYSJ5.393e-850.00Os07g0193600 protein (Fragment) OS=Oryza sativa su... [more]
B9FVZ5_ORYSJ5.393e-850.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR409530 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G18950.18.727e-1254.55| Symbols: | DDT domain superfamily | chr1:654653... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 62..78
score
NoneNo IPR availableSEGsegsegcoord: 33..51
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409530 ID=GR409530; Name=GR409530; organism=Cicer arietinum; type=EST; length=706bp
ATCTGAAAGCCACTTCTCTTTAGTTACAGTACCTGTTAAACAGTTATTGT
ACAACGATTGGATGGGTTAAATAAATAACCCATAACAATTTCTCATTCAT
TTTGGATGGGCTAAAAAAAAATGACTACCTAATCTACATAACTTATCATG
CATGCTGTTTCTGGTGGTAAATCATGCACCAAGGGCTGCTCAAATTATGC
CATAGGAGGAGACCTGCTAATAACTTCCTCTGGGGCTTATAACAAAATTT
ATAACACTATTATCACACACACAGGCTTCCCTGATAGAAAACTACAATCC
CTTCACTTATACAGAAGAGGAAGAAGCTTCAGTAGTCATTGTCTTCATCT
TTCATTATTGTACTTGGACCATCATCAAAACCAGGGCTAGGGGCAAGCTC
ATTCAAATCAAGAAAACGTCTTTTTCCTGTGCCCTCAACTTCTTCGTGAC
CAGGTGGACTACTTGACTTTTCAGGGGGCTGGTTTTGTTCATTCTCTTCT
ACTGCATGGGAAGGAACACTAACAGGCTCATCAACTTTCATTTCCTGATC
TTCATCTTCATTGCTATCTGAATCTTCACTTTCCATCATATATTCCCCAT
TCTCATTCTCACCGGGATCCGAGTGATCAGCCGATGCGTTAGACTTCTTG
GGTTTGATAAACTCAGTTTCCCTCCGCGCTGATACCACCGCTTAATCCAC
AATGAA
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