GR420904
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR420904 vs. TrEMBL
Match: A9PDV0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728506 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.617e-15 Identity = 44/86 (51.16%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 284 WIVLPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRERFELPD 541 +++LPNY T PD E + KQL+E AEACEGMSGR RKLPFLAHAAL LC MI+TA+RE ELP+ Sbjct: 379 YLMLPNYSTLREKLNAPDIQEAQPVLPFCKQLLEAAEACEGMSGRSLRKLPFLAHAALSNPNSCDASEFLCAMIDTARREHSELPE 464
BLAST of GR420904 vs. TrEMBL
Match: B9RAU0_RICCO (Thyroid hormone receptor interactor, putative OS=Ricinus communis GN=RCOM_1508630 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.360e-13 Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = -3 Query: 284 IVLPNYVT---RLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRERFELPD 538 +VLPNY T ++NG+ E T ++L KQL+E AEACEG+SGR RKLPFLAHAAL L TM++ A+RER ELPD Sbjct: 376 LVLPNYPTLKEKMNGSAA---QEAQTPVKLGKQLLEAAEACEGLSGRSLRKLPFLAHAALSDPYSCDPSKFLSTMMDAARRERSELPD 460
BLAST of GR420904 vs. TrEMBL
Match: D7MGN6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492371 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.591e-12 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532 +P++ + A + H+ T KQL+E A+ CEG+SGR RKLPFLAHAAL H +F LCTMIETAKRE+ E P+ Sbjct: 395 IPSFSSLKEKANESEVHDINTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 477
BLAST of GR420904 vs. TrEMBL
Match: Q8H1F9_ARATH (Putative binding protein OS=Arabidopsis thaliana GN=At4g24710 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.691e-11 Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532 +P++ + + H+ T KQL+E A+ CEG+SGR RKLPFLAHAAL H +F LCTMIETAKRE+ E P+ Sbjct: 385 IPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 467
BLAST of GR420904 vs. TrEMBL
Match: Q67ZT1_ARATH (Putative uncharacterized protein At4g24710 (Fragment) OS=Arabidopsis thaliana GN=At4g24710 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.691e-11 Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532 +P++ + + H+ T KQL+E A+ CEG+SGR RKLPFLAHAAL H +F LCTMIETAKRE+ E P+ Sbjct: 281 IPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 363
BLAST of GR420904 vs. TrEMBL
Match: B9IEZ9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252336 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.870e-10 Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = -3 Query: 293 IVLPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRERFE 538 +VLP+Y T P E + KQL+E AEACEGMSGR RKLPFLAH AL + LC MI+TA+RE E Sbjct: 331 LVLPDYSTLREKLNAPT--EAQPVLNFCKQLLEAAEACEGMSGRSLRKLPFLAHGALSDPYSCNASEFLCAMIDTARREHSE 410
BLAST of GR420904 vs. TrEMBL
Match: D7SHI6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007643001 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.026e-8 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = -3 Query: 302 LFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRE 460 L KQL+E AEACEG+SGR RKLPFLAHAAL LCTM +TAKRE Sbjct: 395 LCKQLLEAAEACEGLSGRSLRKLPFLAHAALANPYSCDPSKFLCTMTDTAKRE 447
BLAST of GR420904 vs. TAIR peptide
Match: AT4G24710.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:12745752-12748995 REVERSE LENGTH=475) HSP 1 Score: 72.7886 bits (177), Expect = 1.353e-13 Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532 +P++ + + H+ T KQL+E A+ CEG+SGR RKLPFLAHAAL H +F LCTMIETAKRE+ E P+ Sbjct: 393 IPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 475 The following BLAST results are available for this feature:
BLAST of GR420904 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 7
BLAST of GR420904 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR420904 ID=GR420904; Name=GR420904; organism=Cicer arietinum; type=EST; length=552bpback to top |