GR420904

EST Overview
NameGR420904
Unique NameGR420904
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length552
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR420904 vs. TrEMBL
Match: A9PDV0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728506 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.617e-15
Identity = 44/86 (51.16%), Postives = 52/86 (60.47%), Query Frame = -3
Query:  284 WIVLPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRERFELPD 541
            +++LPNY T       PD  E    +   KQL+E AEACEGMSGR  RKLPFLAHAAL           LC MI+TA+RE  ELP+
Sbjct:  379 YLMLPNYSTLREKLNAPDIQEAQPVLPFCKQLLEAAEACEGMSGRSLRKLPFLAHAALSNPNSCDASEFLCAMIDTARREHSELPE 464          
BLAST of GR420904 vs. TrEMBL
Match: B9RAU0_RICCO (Thyroid hormone receptor interactor, putative OS=Ricinus communis GN=RCOM_1508630 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.360e-13
Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = -3
Query:  284 IVLPNYVT---RLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRERFELPD 538
            +VLPNY T   ++NG+      E  T ++L KQL+E AEACEG+SGR  RKLPFLAHAAL           L TM++ A+RER ELPD
Sbjct:  376 LVLPNYPTLKEKMNGSAA---QEAQTPVKLGKQLLEAAEACEGLSGRSLRKLPFLAHAALSDPYSCDPSKFLSTMMDAARRERSELPD 460          
BLAST of GR420904 vs. TrEMBL
Match: D7MGN6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492371 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.591e-12
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = -3
Query:  284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532
            +P++ +    A   + H+  T     KQL+E A+ CEG+SGR  RKLPFLAHAAL     H   +F   LCTMIETAKRE+ E P+
Sbjct:  395 IPSFSSLKEKANESEVHDINTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 477          
BLAST of GR420904 vs. TrEMBL
Match: Q8H1F9_ARATH (Putative binding protein OS=Arabidopsis thaliana GN=At4g24710 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.691e-11
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3
Query:  284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532
            +P++ +        + H+  T     KQL+E A+ CEG+SGR  RKLPFLAHAAL     H   +F   LCTMIETAKRE+ E P+
Sbjct:  385 IPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 467          
BLAST of GR420904 vs. TrEMBL
Match: Q67ZT1_ARATH (Putative uncharacterized protein At4g24710 (Fragment) OS=Arabidopsis thaliana GN=At4g24710 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.691e-11
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3
Query:  284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532
            +P++ +        + H+  T     KQL+E A+ CEG+SGR  RKLPFLAHAAL     H   +F   LCTMIETAKRE+ E P+
Sbjct:  281 IPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 363          
BLAST of GR420904 vs. TrEMBL
Match: B9IEZ9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252336 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.870e-10
Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = -3
Query:  293 IVLPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRERFE 538
            +VLP+Y T       P   E    +   KQL+E AEACEGMSGR  RKLPFLAH AL      +    LC MI+TA+RE  E
Sbjct:  331 LVLPDYSTLREKLNAPT--EAQPVLNFCKQLLEAAEACEGMSGRSLRKLPFLAHGALSDPYSCNASEFLCAMIDTARREHSE 410          
BLAST of GR420904 vs. TrEMBL
Match: D7SHI6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007643001 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.026e-8
Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = -3
Query:  302 LFKQLVETAEACEGMSGRFFRKLPFLAHAALEPHQVKSF*MLLCTMIETAKRE 460
            L KQL+E AEACEG+SGR  RKLPFLAHAAL           LCTM +TAKRE
Sbjct:  395 LCKQLLEAAEACEGLSGRSLRKLPFLAHAALANPYSCDPSKFLCTMTDTAKRE 447          
BLAST of GR420904 vs. TAIR peptide
Match: AT4G24710.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:12745752-12748995 REVERSE LENGTH=475)

HSP 1 Score: 72.7886 bits (177), Expect = 1.353e-13
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -3
Query:  284 LPNYVTRLNGAKPPDFHEGTTSMQLFKQLVETAEACEGMSGRFFRKLPFLAHAALE---PHQVKSF*MLLCTMIETAKRERFELPD 532
            +P++ +        + H+  T     KQL+E A+ CEG+SGR  RKLPFLAHAAL     H   +F   LCTMIETAKRE+ E P+
Sbjct:  393 IPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNF---LCTMIETAKREKSEQPE 475          
The following BLAST results are available for this feature:
BLAST of GR420904 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
A9PDV0_POPTR5.617e-1551.16Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RAU0_RICCO2.360e-1352.27Thyroid hormone receptor interactor, putative OS=R... [more]
D7MGN6_ARALY7.591e-1247.67Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8H1F9_ARATH1.691e-1146.51Putative binding protein OS=Arabidopsis thaliana G... [more]
Q67ZT1_ARATH1.691e-1146.51Putative uncharacterized protein At4g24710 (Fragme... [more]
B9IEZ9_POPTR1.870e-1048.78Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SHI6_VITVI1.026e-864.15Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of GR420904 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G24710.11.353e-1346.51| Symbols: | P-loop containing nucleoside triphos... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420904 ID=GR420904; Name=GR420904; organism=Cicer arietinum; type=EST; length=552bp
ATTATGTGATTTATTTATAAGTCGAATACCGATTAATCAAGTTTCCAGGA
CACTGATTCCATACTTGAACCTAAAAACTCCTTTAAGAGACCAAAGTGAA
TACAATTTATGACCCGGCTCAATCTCTCAATGAGATCAAGCTAGTTACTA
CTGCAAGTGTATAATAAATAGCTCCCGGTAACTAACATCATTGCTACATC
AACATTTATCACACTAAAATGCAGTGGAAGTAAGTGTTACACTTTTGATT
GAACAATTTTAATTGGAAGCTTTAGTTACATTAGTCAGGAAGCTCAAAGC
GCTCCCTTTTTGCTGTTTCTATCATTGTACATAAAAGCATTCAAAAGGAT
TTGACTTGATGGGGTTCAAGTGCAGCATGTGCCAAAAATGGAAGCTTTCT
GAAAAACCTTCCACTCATTCCCTCACATGCTTCTGCAGTTTCAACTAATT
GCTTGAACAGTTGCATGGATGTAGTACCCTCATGAAAATCTGGTGGTTTT
GCACCGTTCAACCTCGTAACATAATTTGGAAGCACAATCCACAATATTCT
TT
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