HO062582

EST Overview
NameHO062582
Unique NameHO062582
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length324
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062582 vs. TrEMBL
Match: B9RSM6_RICCO (Ran GTPase binding protein, putative OS=Ricinus communis GN=RCOM_1727260 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.761e-11
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = -2
Query:  180 PGQVPIDISPPQNFSGSEAA-GRWIAKLVACGGRHTLAIVEWKEDD 314
            P +VP DI PP++ SG+E A G WIAKLVACGGRHTLAIVEWK D+
Sbjct:  346 PVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVEWKVDE 391          
BLAST of HO062582 vs. TrEMBL
Match: B9N218_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580781 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.363e-10
Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = -2
Query:  180 PGQVPIDISPPQNFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDD 314
            P +VPIDI PP+N + S  AGRWIAKLVA GGRHTLAIVEW   D
Sbjct:  346 PMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVEWHTGD 390          
BLAST of HO062582 vs. TrEMBL
Match: D7TT51_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031071001 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.456e-9
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = -2
Query:  192 PGQVPIDISPPQNFSGSEAAGRWIAKLVACGGRHTLAIVEW 314
            P +VPI++ P  N SGS A G W +KLVACGGRHTLAIVEW
Sbjct:  346 PMEVPINLPPATNLSGSGAGGHWCSKLVACGGRHTLAIVEW 386          
BLAST of HO062582 vs. TrEMBL
Match: Q9LFS0_ARATH (At5g16040 OS=Arabidopsis thaliana GN=F1N13_180 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.693e-8
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = -2
Query:  168 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDDESKD 314
            P ++PI I PP+   N +  E  G+WIAK VACGGRHTLAIVEWK D E  +
Sbjct:  345 PLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKYDQEETE 396          
BLAST of HO062582 vs. TrEMBL
Match: Q8LEY9_ARATH (UVB-resistance protein-like OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.693e-8
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = -2
Query:  168 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDDESKD 314
            P ++PI I PP+   N +  E  G+WIAK VACGGRHTLAIVEWK D E  +
Sbjct:  345 PLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKYDQEETE 396          
BLAST of HO062582 vs. TrEMBL
Match: Q9M889_ARATH (F16B3.14 protein OS=Arabidopsis thaliana GN=F16B3.14 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.888e-8
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = -2
Query:  180 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDD 314
            P ++PI I PP+   N +  E  G+W AK +ACGGRHTLAIVEWK DD
Sbjct:  266 PLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 313          
BLAST of HO062582 vs. TrEMBL
Match: Q2V3Z2_ARATH (Putative uncharacterized protein At3g02510 OS=Arabidopsis thaliana GN=At3g02510 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.888e-8
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = -2
Query:  180 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDD 314
            P ++PI I PP+   N +  E  G+W AK +ACGGRHTLAIVEWK DD
Sbjct:  345 PLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392          
BLAST of HO062582 vs. TrEMBL
Match: D7M7I9_ARALY (Regulator of chromosome condensation family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488454 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.926e-8
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = -2
Query:  168 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDDESKD 314
            P ++PIDI P +   N +  E  G+WIAK VACGGRHTLAIVEWK D E  +
Sbjct:  345 PLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKFDQEGTE 396          
BLAST of HO062582 vs. TrEMBL
Match: D7KZI2_ARALY (Regulator of chromosome condensation family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_896225 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.926e-8
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = -2
Query:  180 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDD 314
            P ++PI I PP+   N +  E  G+W AK +ACGGRHTLAIVEWK DD
Sbjct:  345 PLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVEWKSDD 392          
BLAST of HO062582 vs. TrEMBL
Match: Q6ZKB8_ORYSJ (Os08g0430700 protein OS=Oryza sativa subsp. japonica GN=OJ1124_B05.9 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.097e-7
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = -2
Query:  177 PGQVPIDISPPQNFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDDE 314
            P +VPID+ PP   SG ++ G+W A+ VACGGRHTLAI  W E DE
Sbjct:  351 PMEVPIDLPPPGT-SGGDSGGQWQARYVACGGRHTLAIATWTEADE 395          
BLAST of HO062582 vs. TAIR peptide
Match: AT5G16040.1 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr5:5240860-5243308 REVERSE LENGTH=396)

HSP 1 Score: 62.3882 bits (150), Expect = 6.731e-11
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = -2
Query:  168 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDDESKD 314
            P ++PI I PP+   N +  E  G+WIAK VACGGRHTLAIVEWK D E  +
Sbjct:  345 PLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKYDQEETE 396          
BLAST of HO062582 vs. TAIR peptide
Match: AT3G02510.1 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr3:522086-524536 REVERSE LENGTH=393)

HSP 1 Score: 61.6178 bits (148), Expect = 1.148e-10
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = -2
Query:  180 PGQVPIDISPPQ---NFSGSEAAGRWIAKLVACGGRHTLAIVEWKEDD 314
            P ++PI I PP+   N +  E  G+W AK +ACGGRHTLAIVEWK DD
Sbjct:  345 PLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392          
The following BLAST results are available for this feature:
BLAST of HO062582 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RSM6_RICCO4.761e-1171.74Ran GTPase binding protein, putative OS=Ricinus co... [more]
B9N218_POPTR2.363e-1071.11Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TT51_VITVI4.456e-968.29Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LFS0_ARATH1.693e-857.69At5g16040 OS=Arabidopsis thaliana GN=F1N13_180 PE=... [more]
Q8LEY9_ARATH1.693e-857.69UVB-resistance protein-like OS=Arabidopsis thalian... [more]
Q9M889_ARATH2.888e-858.33F16B3.14 protein OS=Arabidopsis thaliana GN=F16B3.... [more]
Q2V3Z2_ARATH2.888e-858.33Putative uncharacterized protein At3g02510 OS=Arab... [more]
D7M7I9_ARALY4.926e-857.69Regulator of chromosome condensation family protei... [more]
D7KZI2_ARALY4.926e-858.33Regulator of chromosome condensation family protei... [more]
Q6ZKB8_ORYSJ1.097e-758.70Os08g0430700 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of HO062582 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G16040.16.731e-1157.69| Symbols: | Regulator of chromosome condensation... [more]
AT3G02510.11.148e-1058.33| Symbols: | Regulator of chromosome condensation... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 4..13
score
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 4..52
score: 4.4
NoneNo IPR availablePANTHERPTHR22870:SF20UVB-RESISTANCE PROTEIN-RELATEDcoord: 4..52
score: 4.4
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 31..41
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062582 ID=HO062582; Name=HO062582; organism=Cicer arietinum; type=EST; length=324bp
CTTATGTGACAAAACTTTATTGAATAAGCACTTATTTAAATTGTTTATTC
AAGTACACCTCATATCACACCGCACACAACACGAGAATTCTATCACATGG
ATTGAATTCCAAATCAGTGATTAGCCTAATCTACTCCCAAATTCCATTTT
ATTTATGATCAGATTCAATCTTTAGATTCATCATCTTCTTTCCATTCTAC
TATTGCCAAAGTATGGCGGCCGCCACAAGCAACGAGTTTGGCTATCCAAC
GTCCCGCGGCTTCGCTACCACTAAAATTCTGTGGAGGAGAAATGTCTATA
GGTACCTGCCCGGGCGGCCGCTCG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens