HO067088
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067088 vs. SwissProt
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.316e-12 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLASR++FRGF WP+AAYREFLNG+LIAKDV Sbjct: 186 IIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221
BLAST of HO067088 vs. SwissProt
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 8.487e-10 Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = -1 Query: 155 IIIDVPLASRLVFRGFSWPIAAYREFLNGELI 250 IIIDVPLA++L+FRGFSWP+AAYRE+LNGELI Sbjct: 197 IIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228
BLAST of HO067088 vs. SwissProt
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 2.469e-9 Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = -1 Query: 155 IIIDVPLASRLVFRGFSWPIAAYREFLNGELI 250 IIIDVPLAS L+FRGFSWP+AAYRE LNGEL+ Sbjct: 196 IIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
BLAST of HO067088 vs. SwissProt
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 6.725e-7 Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = -1 Query: 146 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKD 250 IIIDV LA+R++ RGF WP+AAYRE +NG+L+ D Sbjct: 196 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230
BLAST of HO067088 vs. TrEMBL
Match: D7KL23_ARALY (At1g31330/T19E23_1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473640 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.067e-10 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLASR++FRGF WP+AAYREFLNG+LIAKDV Sbjct: 185 IIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 220
BLAST of HO067088 vs. TrEMBL
Match: A5B2H3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039382 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.067e-10 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLASRLVFRGF WP+AAYREF+NG+LIAKDV Sbjct: 186 IIIDVPLASRLVFRGFIWPVAAYREFVNGDLIAKDV 221
BLAST of HO067088 vs. TrEMBL
Match: Q9XQB4_PHAAU (Photosystem I reaction center subunit III OS=Phaseolus aureus GN=CipPsaF PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.820e-10 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLASRL+FRGFSWP+AAYRE +NG+LIAKDV Sbjct: 188 IIIDVPLASRLLFRGFSWPVAAYRELINGDLIAKDV 223
BLAST of HO067088 vs. TrEMBL
Match: B7FF89_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.104e-10 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDV LASRLVFRGFSWPIAAYRE +NGELIAKDV Sbjct: 189 IIIDVTLASRLVFRGFSWPIAAYRELVNGELIAKDV 224
BLAST of HO067088 vs. TrEMBL
Match: B9RRQ0_RICCO (Photosystem I reaction center subunit III, chloroplast, putative OS=Ricinus communis GN=RCOM_1426230 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.914e-10 Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLA+ L+FRGFSWP+AAYREF+NGEL+ KDV Sbjct: 190 IIIDVPLATGLIFRGFSWPVAAYREFVNGELVVKDV 225
BLAST of HO067088 vs. TrEMBL
Match: Q2EHP8_POPCA (Putative chloroplast photosystem I subunit III (Fragment) OS=Populus canadensis PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.540e-9 Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLA+ L+FRGFSWP+AAYREF+NG+L+ KDV Sbjct: 27 IIIDVPLATGLIFRGFSWPVAAYREFVNGDLVVKDV 62
BLAST of HO067088 vs. TrEMBL
Match: A9PI20_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_709002 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.540e-9 Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLA+ L+FRGFSWP+AAYREF+NG+L+ KDV Sbjct: 189 IIIDVPLATGLIFRGFSWPVAAYREFVNGDLVVKDV 224
BLAST of HO067088 vs. TrEMBL
Match: Q84QE7_TOBAC (Putative photosystem I subunit III OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.794e-8 Identity = 26/32 (81.25%), Postives = 32/32 (100.00%), Query Frame = -1 Query: 155 IIIDVPLASRLVFRGFSWPIAAYREFLNGELI 250 IIIDVPLA++L++RGFSWP+AAYRE+LNGELI Sbjct: 187 IIIDVPLANKLIWRGFSWPVAAYREYLNGELI 218
BLAST of HO067088 vs. TrEMBL
Match: Q9TI78_LACSA (Photosystem I subunit III (Fragment) OS=Lactuca sativa GN=psaF PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.471e-8 Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLAS LVFRGF WP+AAYRE LNGELI V Sbjct: 105 IIIDVPLASSLVFRGFIWPVAAYRELLNGELIDPSV 140
BLAST of HO067088 vs. TAIR peptide
Match: AT1G31330.1 (| Symbols: PSAF | photosystem I subunit F | chr1:11215011-11215939 REVERSE LENGTH=221) HSP 1 Score: 69.707 bits (169), Expect = 4.157e-13 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1 Query: 143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250 IIIDVPLASR++FRGF WP+AAYREFLNG+LIAKDV Sbjct: 186 IIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221 The following BLAST results are available for this feature:
BLAST of HO067088 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 4
BLAST of HO067088 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 9
BLAST of HO067088 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067088 ID=HO067088; Name=HO067088; organism=Cicer arietinum; type=EST; length=262bpback to top |