HO067088

EST Overview
NameHO067088
Unique NameHO067088
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length262
Libraries
Library NameType
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of HO067088 vs. SwissProt
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.316e-12
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLASR++FRGF WP+AAYREFLNG+LIAKDV
Sbjct:  186 IIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221          
BLAST of HO067088 vs. SwissProt
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.487e-10
Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = -1
Query:  155 IIIDVPLASRLVFRGFSWPIAAYREFLNGELI 250
            IIIDVPLA++L+FRGFSWP+AAYRE+LNGELI
Sbjct:  197 IIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228          
BLAST of HO067088 vs. SwissProt
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.469e-9
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = -1
Query:  155 IIIDVPLASRLVFRGFSWPIAAYREFLNGELI 250
            IIIDVPLAS L+FRGFSWP+AAYRE LNGEL+
Sbjct:  196 IIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227          
BLAST of HO067088 vs. SwissProt
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 6.725e-7
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = -1
Query:  146 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKD 250
            IIIDV LA+R++ RGF WP+AAYRE +NG+L+  D
Sbjct:  196 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230          
BLAST of HO067088 vs. TrEMBL
Match: D7KL23_ARALY (At1g31330/T19E23_1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473640 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.067e-10
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLASR++FRGF WP+AAYREFLNG+LIAKDV
Sbjct:  185 IIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 220          
BLAST of HO067088 vs. TrEMBL
Match: A5B2H3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039382 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.067e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLASRLVFRGF WP+AAYREF+NG+LIAKDV
Sbjct:  186 IIIDVPLASRLVFRGFIWPVAAYREFVNGDLIAKDV 221          
BLAST of HO067088 vs. TrEMBL
Match: Q9XQB4_PHAAU (Photosystem I reaction center subunit III OS=Phaseolus aureus GN=CipPsaF PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.820e-10
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLASRL+FRGFSWP+AAYRE +NG+LIAKDV
Sbjct:  188 IIIDVPLASRLLFRGFSWPVAAYRELINGDLIAKDV 223          
BLAST of HO067088 vs. TrEMBL
Match: B7FF89_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.104e-10
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDV LASRLVFRGFSWPIAAYRE +NGELIAKDV
Sbjct:  189 IIIDVTLASRLVFRGFSWPIAAYRELVNGELIAKDV 224          
BLAST of HO067088 vs. TrEMBL
Match: B9RRQ0_RICCO (Photosystem I reaction center subunit III, chloroplast, putative OS=Ricinus communis GN=RCOM_1426230 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.914e-10
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLA+ L+FRGFSWP+AAYREF+NGEL+ KDV
Sbjct:  190 IIIDVPLATGLIFRGFSWPVAAYREFVNGELVVKDV 225          
BLAST of HO067088 vs. TrEMBL
Match: Q2EHP8_POPCA (Putative chloroplast photosystem I subunit III (Fragment) OS=Populus canadensis PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.540e-9
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLA+ L+FRGFSWP+AAYREF+NG+L+ KDV
Sbjct:   27 IIIDVPLATGLIFRGFSWPVAAYREFVNGDLVVKDV 62          
BLAST of HO067088 vs. TrEMBL
Match: A9PI20_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_709002 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.540e-9
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLA+ L+FRGFSWP+AAYREF+NG+L+ KDV
Sbjct:  189 IIIDVPLATGLIFRGFSWPVAAYREFVNGDLVVKDV 224          
BLAST of HO067088 vs. TrEMBL
Match: Q84QE7_TOBAC (Putative photosystem I subunit III OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.794e-8
Identity = 26/32 (81.25%), Postives = 32/32 (100.00%), Query Frame = -1
Query:  155 IIIDVPLASRLVFRGFSWPIAAYREFLNGELI 250
            IIIDVPLA++L++RGFSWP+AAYRE+LNGELI
Sbjct:  187 IIIDVPLANKLIWRGFSWPVAAYREYLNGELI 218          
BLAST of HO067088 vs. TrEMBL
Match: Q9TI78_LACSA (Photosystem I subunit III (Fragment) OS=Lactuca sativa GN=psaF PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.471e-8
Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLAS LVFRGF WP+AAYRE LNGELI   V
Sbjct:  105 IIIDVPLASSLVFRGFIWPVAAYRELLNGELIDPSV 140          
BLAST of HO067088 vs. TAIR peptide
Match: AT1G31330.1 (| Symbols: PSAF | photosystem I subunit F | chr1:11215011-11215939 REVERSE LENGTH=221)

HSP 1 Score: 69.707 bits (169), Expect = 4.157e-13
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = -1
Query:  143 IIIDVPLASRLVFRGFSWPIAAYREFLNGELIAKDV 250
            IIIDVPLASR++FRGF WP+AAYREFLNG+LIAKDV
Sbjct:  186 IIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221          
The following BLAST results are available for this feature:
BLAST of HO067088 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
PSAF_ARATH5.316e-1286.11Photosystem I reaction center subunit III, chlorop... [more]
PSAF_FLATR8.487e-1084.38Photosystem I reaction center subunit III, chlorop... [more]
PSAF_SPIOL2.469e-984.38Photosystem I reaction center subunit III, chlorop... [more]
PSAF_HORVU6.725e-762.86Photosystem I reaction center subunit III, chlorop... [more]
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BLAST of HO067088 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
D7KL23_ARALY1.067e-1086.11At1g31330/T19E23_1 OS=Arabidopsis lyrata subsp. ly... [more]
A5B2H3_VITVI1.067e-1088.89Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9XQB4_PHAAU1.820e-1086.11Photosystem I reaction center subunit III OS=Phase... [more]
B7FF89_MEDTR3.104e-1091.67Putative uncharacterized protein (Fragment) OS=Med... [more]
B9RRQ0_RICCO6.914e-1080.56Photosystem I reaction center subunit III, chlorop... [more]
Q2EHP8_POPCA1.540e-977.78Putative chloroplast photosystem I subunit III (Fr... [more]
A9PI20_POPTR1.540e-977.78Putative uncharacterized protein OS=Populus tricho... [more]
Q84QE7_TOBAC3.794e-881.25Putative photosystem I subunit III OS=Nicotiana ta... [more]
Q9TI78_LACSA6.471e-880.56Photosystem I subunit III (Fragment) OS=Lactuca sa... [more]
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BLAST of HO067088 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G31330.14.157e-1386.11| Symbols: PSAF | photosystem I subunit F | chr1:1... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067088 ID=HO067088; Name=HO067088; organism=Cicer arietinum; type=EST; length=262bp
CAGTATCATCCTTTGTGGTCTGAAAATCACCAATTTGATGAGTAAATTGA
CAAATTAAAATAGTGAATGAATGAATAATAAAATAATAAAAAGAGAGAGA
GATTGAATTGGACCTTGTTGTGGGAAGGAAAAAAAGAAACTAAACATCCT
TGGCAATGAGTTCACCATTCAAGAACTCTCTATAAGCAGCAATAGGCCAA
CTGAAGCCTCTAAAAACCAATCTAGAAGCAAGTGGAACATCAATAATAAT
CCCCGCGTACCT
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