FE671480

EST Overview
NameFE671480
Unique NameFE671480
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length607
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of FE671480 vs. TrEMBL
Match: B9RFB9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1433520 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.169e-57
Identity = 102/115 (88.70%), Postives = 105/115 (91.30%), Query Frame = 3
Query:  261 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            G G   K FGSVSCSICLDVVTDNGDRS AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRS PEF+MDDW HDEDLYDL+YSEMSFGVHWCPFG+L RLPSS
Sbjct:   20 GGGGCGKSFGSVSCSICLDVVTDNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSLPEFSMDDWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSS 134          
BLAST of FE671480 vs. TrEMBL
Match: B9N4J3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837174 PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.205e-56
Identity = 99/115 (86.09%), Postives = 103/115 (89.57%), Query Frame = 3
Query:  261 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            G   G  F GSVSCSICL+VVTDNGDRS AKL CGHQFHLDCIGSAFN+KGAMQCPNCRKIEKGQWLYANGCRS PEF MDDW HDEDLYDL+YSEMSFGVHWCPFG+L RLPSS
Sbjct:   21 GGLNGKSFGGSVSCSICLEVVTDNGDRSWAKLQCGHQFHLDCIGSAFNVKGAMQCPNCRKIEKGQWLYANGCRSLPEFTMDDWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSS 135          
BLAST of FE671480 vs. TrEMBL
Match: B9I7H8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_240561 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.416e-56
Identity = 98/115 (85.22%), Postives = 103/115 (89.57%), Query Frame = 3
Query:  261 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            G   G  F GSVSCSICL+VV DNGDRS AKL CGHQFHLDCIGSAFN+KGAMQCPNCRKIEKGQWLYANGCRS PEF+MDDW HDEDLYDL+YSEMSFGVHWCPFG+L RLPSS
Sbjct:   10 GGLNGKSFGGSVSCSICLEVVADNGDRSWAKLQCGHQFHLDCIGSAFNVKGAMQCPNCRKIEKGQWLYANGCRSLPEFSMDDWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSS 124          
BLAST of FE671480 vs. TrEMBL
Match: D7U9U5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_60.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031134001 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.024e-53
Identity = 98/116 (84.48%), Postives = 104/116 (89.66%), Query Frame = 3
Query:  261 GDGRGSKFFGS-VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            GDG G  F  S VSCSICL++VTDNGDR+ AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCR++PEFNMDD THDEDLYD +YSEMSFGVHWCPF  LTRLPSS
Sbjct:   42 GDGEGKAFAASSVSCSICLEIVTDNGDRAWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRTFPEFNMDDLTHDEDLYD-SYSEMSFGVHWCPFSGLTRLPSS 156          
BLAST of FE671480 vs. TrEMBL
Match: A5B3S4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040485 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.024e-53
Identity = 98/116 (84.48%), Postives = 104/116 (89.66%), Query Frame = 3
Query:  261 GDGRGSKFFGS-VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            GDG G  F  S VSCSICL++VTDNGDR+ AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCR++PEFNMDD THDEDLYD +YSEMSFGVHWCPF  LTRLPSS
Sbjct:   12 GDGEGKAFAASSVSCSICLEIVTDNGDRAWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRTFPEFNMDDLTHDEDLYD-SYSEMSFGVHWCPFSGLTRLPSS 126          
BLAST of FE671480 vs. TrEMBL
Match: Q84WW4_ARATH (Putative uncharacterized protein At3g05545 OS=Arabidopsis thaliana GN=At3g05545 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.692e-48
Identity = 85/114 (74.56%), Postives = 95/114 (83.33%), Query Frame = 3
Query:  264 DGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLN-YSEMSFGVHWCPFGNLTRLPS 602
            DG     FGSV+CSICL+ V  NGDR+ A L C HQFHLDCIGSAFN KG MQCPNCRK+EKGQWLYANGCRSYPEFN++DW H+ED+YD+  YSEMSFGVHWCPFG+  RLPS
Sbjct:   25 DGDEGDGFGSVACSICLETVVKNGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEEDIYDIGAYSEMSFGVHWCPFGSSARLPS 138          
BLAST of FE671480 vs. TrEMBL
Match: D7L3V8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477844 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.444e-47
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 3
Query:  261 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLN-YSEMSFGVHWCPFGNLTRLPS 602
            GDG     FGSV+CSICL+ V  NGDR+ A L C HQFHLDCIGSAFN KG MQCPNCRK+EKGQWLYANGCR+YPEF+++DW H+ED+YD+  YSE+SFGVHWCPFG+  RLPS
Sbjct:   32 GDG-----FGSVACSICLETVVKNGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRTYPEFSVEDWVHEEDIYDIGAYSELSFGVHWCPFGSSARLPS 141          
BLAST of FE671480 vs. TrEMBL
Match: D7U291_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028007001 PE=4 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.639e-43
Identity = 79/105 (75.24%), Postives = 91/105 (86.67%), Query Frame = 3
Query:  294 VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANG-CRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            VSCSICLD+VTDNG+RS AKL CGH+FHLDCIGSAFN+KGAMQCPNCRKIE+G+WL+ANG  RS+PEF+MDDWT DE+ YD NYSEM F V WCPF   T++ SS
Sbjct:   20 VSCSICLDLVTDNGERSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKIERGRWLFANGSARSFPEFSMDDWTPDEETYDFNYSEMPFRVQWCPFSGFTQVRSS 124          
BLAST of FE671480 vs. TrEMBL
Match: B9SAQ0_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1177930 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.812e-42
Identity = 78/105 (74.29%), Postives = 87/105 (82.86%), Query Frame = 3
Query:  294 VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGC-RSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            +SCSICLD V DNG RS AKL CGH+FHLDCIGSAFN+KGAMQCPNCRK+EKGQWLYANG  R  PE +MDDW  +ED YDL+YSEM + VHWCPFG L R+ SS
Sbjct:   49 ISCSICLDTVLDNGGRSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKVEKGQWLYANGSNRMLPEMSMDDWIPEEDFYDLSYSEMPYRVHWCPFGELARVGSS 153          
BLAST of FE671480 vs. TrEMBL
Match: B9DHH4_ARATH (AT3G05545 protein (Fragment) OS=Arabidopsis thaliana GN=AT3G05545 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.886e-42
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 3
Query:  321 VTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLN-YSEMSFGVHWCPFGNLTRLPS 602
            V  NGDR+ A L C HQFHLDCIGSAFN KG MQCPNCRK+EKGQWLYANGCRSYPEFN++DW H+ED+YD+  YSEMSFGVHWCPFG+  RLPS
Sbjct:    1 VVKNGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEEDIYDIGAYSEMSFGVHWCPFGSSARLPS 95          
BLAST of FE671480 vs. TAIR peptide
Match: AT3G05545.1 (| Symbols: | RING/U-box superfamily protein | chr3:1609436-1612133 FORWARD LENGTH=425)

HSP 1 Score: 196.052 bits (497), Expect = 1.258e-50
Identity = 85/114 (74.56%), Postives = 95/114 (83.33%), Query Frame = 3
Query:  264 DGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLN-YSEMSFGVHWCPFGNLTRLPS 602
            DG     FGSV+CSICL+ V  NGDR+ A L C HQFHLDCIGSAFN KG MQCPNCRK+EKGQWLYANGCRSYPEFN++DW H+ED+YD+  YSEMSFGVHWCPFG+  RLPS
Sbjct:   25 DGDEGDGFGSVACSICLETVVKNGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEEDIYDIGAYSEMSFGVHWCPFGSSARLPS 138          
BLAST of FE671480 vs. TAIR peptide
Match: AT2G47700.1 (| Symbols: RFI2 | RING/U-box superfamily protein | chr2:19552506-19554351 REVERSE LENGTH=358)

HSP 1 Score: 168.318 bits (425), Expect = 2.808e-42
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 3
Query:  294 VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANG-CRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSS 605
            VSCSICL+ V D+G RS AKL CGHQFHLDCIGSAFN+KGAMQCPNCR +EKGQWLYANG  R +PEF+M+DW  +EDLY L+Y EM + VHWCPFG L++  +S
Sbjct:   36 VSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVEKGQWLYANGSTRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQAAAS 140          
BLAST of FE671480 vs. TAIR peptide
Match: AT2G15260.1 (| Symbols: | RING/U-box superfamily protein | chr2:6630528-6634008 FORWARD LENGTH=362)

HSP 1 Score: 85.8853 bits (211), Expect = 1.833e-17
Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  270 RGSKFFGSVS-CSICLDVVTDNGD--RSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPE-FNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNL 587
            + S + G +  CSIC   + +  D  R+L  L C H+FHLDCIGSA+N KG M+CPNCR IE G W +++G    P     ++   +ED    ++S+M      CPFG L
Sbjct:  112 KDSDYLGDLDLCSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNCRNIEPGHWQFSDGTHFNPNGMIANNEEEEEDNDPGSFSQMIVKSEVCPFGCL 221          
BLAST of FE671480 vs. TAIR peptide
Match: AT4G13490.1 (| Symbols: | RING/U-box superfamily protein | chr4:7839137-7840284 REVERSE LENGTH=226)

HSP 1 Score: 82.8037 bits (203), Expect = 1.552e-16
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  285 FGSVSCSICLDVVTDNGD-RSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNM 500
            F    C++CL+ + ++ D R++ KL C H+FHLDC+GS+FNIK  M+CP CR+IEKG+WL+A       E +M
Sbjct:   17 FDDDDCAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCCRQIEKGKWLFAEPVDQLEEDDM 89          
The following BLAST results are available for this feature:
BLAST of FE671480 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RFB9_RICCO1.169e-5788.70DNA binding protein, putative OS=Ricinus communis ... [more]
B9N4J3_POPTR2.205e-5686.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9I7H8_POPTR6.416e-5685.22Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7U9U5_VITVI1.024e-5384.48Whole genome shotgun sequence of line PN40024, sca... [more]
A5B3S4_VITVI1.024e-5384.48Putative uncharacterized protein OS=Vitis vinifera... [more]
Q84WW4_ARATH1.692e-4874.56Putative uncharacterized protein At3g05545 OS=Arab... [more]
D7L3V8_ARALY5.444e-4772.17Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7U291_VITVI1.639e-4375.24Whole genome shotgun sequence of line PN40024, sca... [more]
B9SAQ0_RICCO1.812e-4274.29DNA binding protein, putative OS=Ricinus communis ... [more]
B9DHH4_ARATH6.886e-4277.89AT3G05545 protein (Fragment) OS=Arabidopsis thalia... [more]
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BLAST of FE671480 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G05545.11.258e-5074.56| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G47700.12.808e-4270.48| Symbols: RFI2 | RING/U-box superfamily protein |... [more]
AT2G15260.11.833e-1740.91| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G13490.11.552e-1647.95| Symbols: | RING/U-box superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 5..22
score
NoneNo IPR availablePANTHERPTHR23041RING FINGER PROTEIN 4coord: 41..105
score: 0.0
NoneNo IPR availablePANTHERPTHR23041:SF1RING FINGER PROTEIN 4coord: 41..105
score: 0.0
NoneNo IPR availableSEGsegsegcoord: 8..24
score: NAcoord: 26..45
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 54..119
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 46..55
score
IPR001841Zinc finger, RING-typeSMARTSM00184no descriptioncoord: 59..103
score: 4.1
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 59..104
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 57..106
score: 3.2
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 59..103
score: 1.6

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE671480 ID=FE671480; Name=FE671480; organism=Cicer arietinum; type=EST; length=607bp
ATCCCGAAACCAAGAAGACCTTAGATCTCATAGTTTTCTGATCCATGTCC
TAATTCAGACACAAACAAACATTTCGCAAATATTCAAATAAATAAATAAT
ATTCCAGACACAAACACCAATTTGAATTTACTTTCTATATTCCCCCGGTT
TTATTTTCCGATTTTTAGGGTTTTTTTTGTTTGTAATGGGTCTTGGTAAA
GACGAGGAAGAGGATATTAAAATTCACAATCATCATAATCATAATAAGGT
TGTGGATGAAGGAGATGGTCGAGGAAGCAAGTTTTTTGGTTCAGTGTCTT
GTTCAATTTGTCTCGATGTTGTTACCGATAATGGAGATAGATCCTTGGCT
AAGCTTCTTTGTGGACATCAATTTCATCTTGATTGCATTGGTTCGGCATT
CAATATAAAAGGAGCAATGCAATGCCCTAATTGTCGGAAGATTGAGAAAG
GTCAGTGGCTTTATGCTAACGGCTGTCGGTCATATCCAGAATTCAACATG
GATGACTGGACGCATGATGAGGACCTATATGATTTAAACTACTCTGAAAT
GTCCTTTGGAGTTCATTGGTGCCCATTCGGCAACCTGACACGACTTCCAT
CATCTTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type