GR391135

EST Overview


Name	GR391135
Unique Name	GR391135
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	717

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR391135 vs. SwissProt
Match: PM1_SOYBN (18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.804e-11
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGS 148
            VVGSHPIGTNRGP GTATAHNTRAGG  N  GY TGG+
Sbjct:  136 VVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTGGT 173

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FT33_GLYTO (Seed maturation protein OS=Glycine tomentella PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.145e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+Y+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 170

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FNW3_GLYTO (Seed maturation protein LEA 4 OS=Glycine tomentella PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.145e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+Y+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 170

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FNW1_GLYTO (Seed maturation protein LEA 4 OS=Glycine tomentella PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.145e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+Y+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 170

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FE69_GLYTO (Seed maturation protein LEA 4 OS=Glycine tomentella PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.145e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+Y+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 170

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q7DML3_GLYSO (Late embryogenesis abundant protein (Fragment) OS=Glycine soja PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.145e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+Y+
Sbjct:  113 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 152

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q01527_SOYBN (Maturation protein OS=Glycine max GN=gGmpm9 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.145e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+Y+
Sbjct:  113 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 152

[Close]

BLAST of GR391135 vs. TrEMBL
Match: O24442_PHAVU (Group 4-late embryogenesis abundant protein PvLEA4-25 (Fragment) OS=Phaseolus vulgaris GN=Pvlea4-25 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.561e-10
Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGSYS 154
            VVGSHPIGTNRGP GT TAHNT AGGN N  GY TGGSY+
Sbjct:   52 VVGSHPIGTNRGPGGTTTAHNTHAGGNPNDYGYGTGGSYN 91

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FT31_GLYTA (Seed maturation protein OS=Glycine tabacina PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.663e-10
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGS 148
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGT 168

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FT30_GLYTO (Seed maturation protein OS=Glycine tomentella PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.663e-10
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGS 148
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGT 168

[Close]

BLAST of GR391135 vs. TrEMBL
Match: Q9FT28_GLYTO (Seed maturation protein OS=Glycine tomentella PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.663e-10
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 2

Query:   35 VVGSHPIGTNRGPDGTATAHNTRAGGNLNATGYTTGGS 148
            VVGSHPIGTNRGP GTATAHNTRAGGN N  GY TGG+
Sbjct:  131 VVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGT 168

The following BLAST results are available for this feature:

BLAST of GR391135 vs. SwissProt
BLAST of GR391135 vs. TrEMBL

BLAST of GR391135 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
PM1_SOYBN	8.804e-11	81.58	18 kDa seed maturation protein OS=Glycine max GN=G...	[more]

BLAST of GR391135 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9FT33_GLYTO	3.145e-11	82.50	Seed maturation protein OS=Glycine tomentella PE=2...	[more]
Q9FNW3_GLYTO	3.145e-11	82.50	Seed maturation protein LEA 4 OS=Glycine tomentell...	[more]
Q9FNW1_GLYTO	3.145e-11	82.50	Seed maturation protein LEA 4 OS=Glycine tomentell...	[more]
Q9FE69_GLYTO	3.145e-11	82.50	Seed maturation protein LEA 4 OS=Glycine tomentell...	[more]
Q7DML3_GLYSO	3.145e-11	82.50	Late embryogenesis abundant protein (Fragment) OS=...	[more]
Q01527_SOYBN	3.145e-11	82.50	Maturation protein OS=Glycine max GN=gGmpm9 PE=2 S...	[more]
O24442_PHAVU	1.561e-10	80.00	Group 4-late embryogenesis abundant protein PvLEA4...	[more]
Q9FT31_GLYTA	2.663e-10	84.21	Seed maturation protein OS=Glycine tabacina PE=2 S...	[more]
Q9FT30_GLYTO	2.663e-10	84.21	Seed maturation protein OS=Glycine tomentella PE=2...	[more]
Q9FT28_GLYTO	2.663e-10	84.21	Seed maturation protein OS=Glycine tomentella PE=2...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 8..24 score: NAcoord: 27..58 score
None	No IPR available	SEG	seg	seg	coord: 32..90 score
None	No IPR available	SEG	seg	seg	coord: 8..25 score: NAcoord: 73..92 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR391135 ID=GR391135; Name=GR391135; organism=Cicer arietinum; type=EST; length=717bp
AAGCAGTGTTATCAACGCAGAGCACGCGGGGTGAGTGGTGGGCTCACACC
CGATTGGAACTAATAGAGGCCCAGATGGGACCGCTACGGCCCATAATACT
CGTGCTGGTGGAAATCTGAATGCCACAGGGTATACAACTGGCGGTTCTTA
TTCTTAATTAAATGATAAGGACTGCACAAAGCTTAGTCTTGTTTGTTTCA
TTTCCTCTTTTCTGTAAGTTTGCTATGAGTTTGTGGATGTTCCCACTTTT
ACGTGGAGCGTTCTGCTGTCTTGGAGCTTTATATTGCAATTTTCACTTCT
TTCAATTTAATAAATTGTCGATTTGGGTTATGCCCACTTCCATCCCACCC
CACCCATCATTAGTCCTCCTGTGTTTGATTCCTCTTGCCCCATTCACTTC
TTGCATTCTTTTTTCCCCCCGCTCCTCTTATCCCTAGGTTAGTAGCCCCC
CCACCCGCTTTTATTTACCTCCCCTCGTACTCTTTTTATATCTGCTCCCT
CCCACACCCTTCTGTGTTTTAACCCCTTGGCCATTTATTTGCCTCCCCCG
TTTTTCCTACTTCTTTCCTTCCTTTTTCCTCTACATTTCCCCTTCACCTC
ACATCTTTTTTTATTCCCTCCTTATTTCCTATTTCCCTGTTGTTTTCCCT
CACTTTATTGCCATCTACCTTTTCCCCTTCTTTTTTTTCTATCCCTCACC
TGCCTTTTTTTACACTC

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