GR391625

EST Overview


Name	GR391625
Unique Name	GR391625
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	756

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.254e-14
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK L+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  115 AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.647e-14
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK+L+  TCQTVA MIKG+TPE+IR  FNIKNDFTP        ENQWAFE
Sbjct:  104 AANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

HSP 2 Score: 21.1718 bits (43), Expect = 6.647e-14
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = -3

Query:  521 RVIEYVKKHVKDA 559
            +VIEY K+HV+ A
Sbjct:   54 KVIEYCKRHVEAA 66

[Close]

BLAST of GR391625 vs. SwissProt
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.237e-13
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IR  FNI+NDFTP        ENQWAFE
Sbjct:   96 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of GR391625 vs. SwissProt
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.109e-13
Identity = 38/57 (66.67%), Postives = 42/57 (73.68%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL   TCQTVA MIKG+TPE+IR  FNI+NDFTP        ENQWAFE
Sbjct:   96 AANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.798e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N L+IK L+  TC+TVA MIKG+TPE+IRK FNIKNDFT         ENQW  E
Sbjct:  106 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.798e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N L+IK L+  TC+TVA MIKG+TPE+IRK FNIKNDFT         ENQW  E
Sbjct:  106 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.798e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N L+IK L+  TC+TVA MIKG+TPE+IRK FNIKNDFT         ENQW  E
Sbjct:  106 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.798e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N L+IK L+  TC+TVA MIKG+TPE+IRK FNIKNDFT         ENQW  E
Sbjct:  106 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.798e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N L+IK L+  TC+TVA MIKG+TPE+IRK FNIKNDFT         ENQW  E
Sbjct:  106 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of GR391625 vs. SwissProt
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.798e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N L+IK L+  TC+TVA MIKG+TPE+IRK FNIKNDFT         ENQW  E
Sbjct:  106 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of GR391625 vs. TrEMBL
Match: B9R8D3_RICCO (Skp1, putative OS=Ricinus communis GN=RCOM_1598810 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.001e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  101 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

HSP 2 Score: 23.483 bits (49), Expect = 2.001e-14
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = -3

Query:  518 RVIEYVKKHVKDAK 559
            +VIEY KKHV+ +K
Sbjct:   55 KVIEYCKKHVETSK 68

[Close]

BLAST of GR391625 vs. TrEMBL
Match: B9TGY7_RICCO (Skp1, putative OS=Ricinus communis GN=RCOM_1912270 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.378e-14
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LN+K L+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  102 AANYLNVKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158

HSP 2 Score: 24.6386 bits (52), Expect = 3.378e-14
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = -3

Query:  521 RVIEYVKKHVKDA 559
            +VIEY KKHV DA
Sbjct:   55 KVIEYCKKHVADA 67

[Close]

BLAST of GR391625 vs. TrEMBL
Match: B9R8D4_RICCO (Skp1, putative OS=Ricinus communis GN=RCOM_1598820 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.380e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  101 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

HSP 2 Score: 22.7126 bits (47), Expect = 3.380e-14
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = -3

Query:  518 RVIEYVKKHVKDAK 559
            +VIEY KKHV+  K
Sbjct:   55 KVIEYCKKHVETPK 68

[Close]

BLAST of GR391625 vs. TrEMBL
Match: A5BBC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040452 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.397e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  100 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156

HSP 2 Score: 22.3274 bits (46), Expect = 4.397e-14
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = -3

Query:  518 RVIEYVKKHVKDAK 559
            +VIEY KKHV+  K
Sbjct:   55 KVIEYCKKHVEAPK 68

[Close]

BLAST of GR391625 vs. TrEMBL
Match: C6T533_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.401e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:   99 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

HSP 2 Score: 22.3274 bits (46), Expect = 4.401e-14
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = -3

Query:  521 RVIEYVKKHVKDA 559
            +VIEY KKHV+ A
Sbjct:   55 KVIEYCKKHVEAA 67

[Close]

BLAST of GR391625 vs. TrEMBL
Match: Q6J4P0_9ARAE (Skp1/Ask1-like protein OS=Zantedeschia hybrid cultivar PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.372e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  111 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 167

HSP 2 Score: 21.557 bits (44), Expect = 7.372e-14
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = -3

Query:  515 RVIEYVKKHVKDAKL 559
            +VIE+ KKHV+ A L
Sbjct:   62 KVIEFCKKHVEIAAL 76

[Close]

BLAST of GR391625 vs. TrEMBL
Match: A9PDK8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813631 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.421e-14
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK+L+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  101 AANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

HSP 2 Score: 22.7126 bits (47), Expect = 7.421e-14
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = -3

Query:  518 RVIEYVKKHVKDAK 559
            +VIEY KKHV+  K
Sbjct:   55 KVIEYCKKHVETPK 68

[Close]

BLAST of GR391625 vs. TrEMBL
Match: C6TH23_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.433e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:   99 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

HSP 2 Score: 21.557 bits (44), Expect = 7.433e-14
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = -3

Query:  527 RVIEYVKKHVK 559
            +VIEY KKHV+
Sbjct:   55 KVIEYCKKHVE 65

[Close]

BLAST of GR391625 vs. TrEMBL
Match: C6SZH2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.433e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:   99 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

HSP 2 Score: 21.557 bits (44), Expect = 7.433e-14
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = -3

Query:  527 RVIEYVKKHVK 559
            +VIEY KKHV+
Sbjct:   55 KVIEYCKKHVE 65

[Close]

BLAST of GR391625 vs. TrEMBL
Match: C6SVG3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.433e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:   99 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

HSP 2 Score: 21.557 bits (44), Expect = 7.433e-14
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = -3

Query:  527 RVIEYVKKHVK 559
            +VIEY KKHV+
Sbjct:   55 KVIEYCKKHVE 65

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT5G42190.1 (| Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein | chr5:16854495-16855516 REVERSE LENGTH=171)

HSP 1 Score: 78.9518 bits (193), Expect = 3.224e-15
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK L+  TCQTVA MIKG+TPE+IRK FNIKNDFTP        ENQWAFE
Sbjct:  115 AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT1G75950.1 (| Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase kinase-associated protein 1 | chr1:28516715-28517454 FORWARD LENGTH=160)

HSP 1 Score: 77.0258 bits (188), Expect = 6.533e-15
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK+L+  TCQTVA MIKG+TPE+IR  FNIKNDFTP        ENQWAFE
Sbjct:  104 AANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

HSP 2 Score: 21.1718 bits (43), Expect = 6.533e-15
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = -3

Query:  521 RVIEYVKKHVKDA 559
            +VIEY K+HV+ A
Sbjct:   54 KVIEYCKRHVEAA 66

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT4G34210.1 (| Symbols: ASK11, SK11 | SKP1-like 11 | chr4:16379003-16379461 FORWARD LENGTH=152)

HSP 1 Score: 77.0258 bits (188), Expect = 1.225e-14
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL+  TCQTVA MIKG+TPE+IR  FNI+NDFTP        ENQWAFE
Sbjct:   96 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT4G34470.1 (| Symbols: ASK12, SK12 | SKP1-like 12 | chr4:16480022-16480480 REVERSE LENGTH=152)

HSP 1 Score: 76.2554 bits (186), Expect = 2.090e-14
Identity = 38/57 (66.67%), Postives = 42/57 (73.68%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL   TCQTVA MIKG+TPE+IR  FNI+NDFTP        ENQWAFE
Sbjct:   96 AANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT3G21850.1 (| Symbols: ASK9, SK9 | SKP1-like 9 | chr3:7697089-7697550 REVERSE LENGTH=153)

HSP 1 Score: 67.0106 bits (162), Expect = 1.268e-11
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIKSL    CQTVA +IKG TPE+IR+ FNI+ND TP        EN+WAFE
Sbjct:   97 AANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT2G25700.1 (| Symbols: ASK3, SK3 | SKP1-like 3 | chr2:10948914-10949551 REVERSE LENGTH=163)

HSP 1 Score: 62.003 bits (149), Expect = 7.890e-11
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = -1

Query:  253 LGASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 429
            L A+N LNI  L+  TC+ VA  ++G+TP ++R+ FNIKND+TP        EN+WAFE
Sbjct:  105 LRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

HSP 2 Score: 22.3274 bits (46), Expect = 7.890e-11
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = -3

Query:  521 RVIEYVKKHVKDA 559
            +VIEY KKHV+ A
Sbjct:   56 KVIEYCKKHVEAA 68

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT1G20140.1 (| Symbols: ASK4, SK4 | SKP1-like 4 | chr1:6986430-6987079 FORWARD LENGTH=163)

HSP 1 Score: 62.003 bits (149), Expect = 7.890e-11
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNI  L+  TC+ VA  ++G+TPE++R  FNIKND+TP        EN+WAFE
Sbjct:  107 AANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

HSP 2 Score: 22.3274 bits (46), Expect = 7.890e-11
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = -3

Query:  521 RVIEYVKKHVKDA 559
            +VIEY KKHV+ A
Sbjct:   56 KVIEYCKKHVEAA 68

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT2G03170.1 (| Symbols: ASK14, SK14 | SKP1-like 14 | chr2:961322-961771 FORWARD LENGTH=149)

HSP 1 Score: 62.7734 bits (151), Expect = 7.937e-11
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK L+  + QTVA  IK +TPE+IR+ FNI+NDFTP        EN WAFE
Sbjct:   93 AANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149

HSP 2 Score: 21.557 bits (44), Expect = 7.937e-11
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = -3

Query:  524 VIEYVKKHVKD 556
            V+EY KKHV D
Sbjct:   55 VVEYCKKHVVD 65

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT3G60010.1 (| Symbols: ASK13, SK13 | SKP1-like 13 | chr3:22163094-22163558 REVERSE LENGTH=154)

HSP 1 Score: 61.2326 bits (147), Expect = 2.911e-10
Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A+N LNIK L+   CQTVA MI G+ P++IR    I+NDFTP        ENQWAFE
Sbjct:   98 AANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154

HSP 2 Score: 21.1718 bits (43), Expect = 2.911e-10
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = -3

Query:  530 RVIEYVKKHV 559
            +VIEY KKHV
Sbjct:   53 KVIEYCKKHV 62

[Close]

BLAST of GR391625 vs. TAIR peptide
Match: AT2G03190.1 (| Symbols: ASK16, SK16 | SKP1-like 16 | chr2:964232-964744 FORWARD LENGTH=170)

HSP 1 Score: 61.6178 bits (148), Expect = 5.327e-10
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = -1

Query:  253 ASN*LNIKSLVGFTCQTVAGMIKGRTPEKIRKPFNIKNDFTPXXXXXXXXENQWAFE 423
            A N LN++ L+G TCQTVA  +K  +PE++R+ FNI+ND+TP        EN WAFE
Sbjct:  111 AVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167

The following BLAST results are available for this feature:

BLAST of GR391625 vs. SwissProt
BLAST of GR391625 vs. TrEMBL
BLAST of GR391625 vs. TAIR peptide

BLAST of GR391625 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SKP1B_ARATH	3.254e-14	68.42	SKP1-like protein 1B OS=Arabidopsis thaliana GN=SK...	[more]
SKP1A_ARATH	6.647e-14	66.67	SKP1-like protein 1A OS=Arabidopsis thaliana GN=SK...	[more]
ASK11_ARATH	1.237e-13	66.67	SKP1-like protein 11 OS=Arabidopsis thaliana GN=AS...	[more]
ASK12_ARATH	2.109e-13	66.67	SKP1-like protein 12 OS=Arabidopsis thaliana GN=AS...	[more]
SKP1_XENLA	9.798e-11	59.65	S-phase kinase-associated protein 1 OS=Xenopus lae...	[more]
SKP1_RAT	9.798e-11	59.65	S-phase kinase-associated protein 1 OS=Rattus norv...	[more]
SKP1_PONAB	9.798e-11	59.65	S-phase kinase-associated protein 1 OS=Pongo abeli...	[more]
SKP1_MOUSE	9.798e-11	59.65	S-phase kinase-associated protein 1 OS=Mus musculu...	[more]
SKP1_MACFA	9.798e-11	59.65	S-phase kinase-associated protein 1 OS=Macaca fasc...	[more]
SKP1_HUMAN	9.798e-11	59.65	S-phase kinase-associated protein 1 OS=Homo sapien...	[more]

BLAST of GR391625 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9R8D3_RICCO	2.001e-14	70.18	Skp1, putative OS=Ricinus communis GN=RCOM_1598810...	[more]
B9TGY7_RICCO	3.378e-14	66.67	Skp1, putative OS=Ricinus communis GN=RCOM_1912270...	[more]
B9R8D4_RICCO	3.380e-14	70.18	Skp1, putative OS=Ricinus communis GN=RCOM_1598820...	[more]
A5BBC4_VITVI	4.397e-14	70.18	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6T533_SOYBN	4.401e-14	70.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q6J4P0_9ARAE	7.372e-14	70.18	Skp1/Ask1-like protein OS=Zantedeschia hybrid cult...	[more]
A9PDK8_POPTR	7.421e-14	68.42	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6TH23_SOYBN	7.433e-14	70.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SZH2_SOYBN	7.433e-14	70.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SVG3_SOYBN	7.433e-14	70.18	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of GR391625 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G42190.1	3.224e-15	68.42	\| Symbols: ASK2, SKP1B \| E3 ubiquitin ligase SCF c...	[more]
AT1G75950.1	6.533e-15	66.67	\| Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 \| S pha...	[more]
AT4G34210.1	1.225e-14	66.67	\| Symbols: ASK11, SK11 \| SKP1-like 11 \| chr4:16379...	[more]
AT4G34470.1	2.090e-14	66.67	\| Symbols: ASK12, SK12 \| SKP1-like 12 \| chr4:16480...	[more]
AT3G21850.1	1.268e-11	59.65	\| Symbols: ASK9, SK9 \| SKP1-like 9 \| chr3:7697089-...	[more]
AT2G25700.1	7.890e-11	49.15	\| Symbols: ASK3, SK3 \| SKP1-like 3 \| chr2:10948914...	[more]
AT1G20140.1	7.890e-11	50.88	\| Symbols: ASK4, SK4 \| SKP1-like 4 \| chr1:6986430-...	[more]
AT2G03170.1	7.937e-11	56.14	\| Symbols: ASK14, SK14 \| SKP1-like 14 \| chr2:96132...	[more]
AT3G60010.1	2.911e-10	54.39	\| Symbols: ASK13, SK13 \| SKP1-like 13 \| chr3:22163...	[more]
AT2G03190.1	5.327e-10	50.88	\| Symbols: ASK16, SK16 \| SKP1-like 16 \| chr2:96423...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 39..51 score
None	No IPR available	SEG	seg	seg	coord: 44..55 score
None	No IPR available	PANTHER	PTHR11165:SF22	SKP1	coord: 1..53 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 39..47 score
IPR001232	SKP1 component	PANTHER	PTHR11165	SKP1	coord: 1..53 score: 1.4
IPR011333	BTB/POZ fold	GENE3D	3.30.710.10	no description	coord: 1..53 score: 2.6
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 1..53 score: 4.5
IPR016072	SKP1 component, dimerisation	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 1..51 score: 1.5

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR391625 ID=GR391625; Name=GR391625; organism=Cicer arietinum; type=EST; length=756bp
CAGCAACCATCCAAATCAACCCATATGCTCATAAACAACTATTACTTTAC
TTACAATTCAAACTTCCCTTAAGTTCATGACATAAGATAACGCTGTCCAG
TGAATATAGTTAACACTCAGCACGAATAATCCCATAAACAAACAGAGTAC
ATAGCATATATAAATCTACATTGCGGATTTTTGGTGAATAAAACAAACAT
AATAGCCATTAATCCACTTTGCAAATCTCTGTGCGAGATTTGAAACATAT
CATTCAAATGCCCATTGATTCTCCCTACGAACTTCCTCCTCTTCTTCAGG
GGTGAAGTCATTCTTGATGTTAAAAGGCTTGCGAATTTTTTCCGGTGTCC
TCCCCTTAATCATGCCTGCCACTGTCTGGCATGTAAAACCCACAAGGCTC
TTGATGTTTAATTAGTTTGAAGCCCCTAATTAAATTCGAAAAGCTCATCT
TGGACAACCTTAACCATATCAAGCTTTCAAAACTTAAACACCCCCCCCTT
TAAGTTAATCATCCCAACTTAGCATCCTTCACATGTTTTTTCACATACTC
TATTACCCTTCACCAAAAACTTGCTTGTCTCCCTTATTAAAAAAACCCCC
CTTTTCCTGCCCACTCAATTCTTCAAATCATGGGCGCTTTTTATTTTTTT
ACTTTCAAGCCTATTTGTTTTATTCCACCCCCTAGGTTCTTTTCATTACC
CACCCCCTTTACGGTCTATATTTTTTCTCAATAAGACCTATATTTAATCA
TAATTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001232	SKP1-like
IPR011333	SKP1/BTB/POZ_sf
IPR016072	Skp1_comp_dimer

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