DY475169

EST Overview


Name	DY475169
Unique Name	DY475169
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	255

Libraries


Library Name	Type
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_XENLA (Pre-mRNA-splicing factor 18 OS=Xenopus laevis GN=prpf18 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.963e-21
Identity = 43/81 (53.09%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            KK LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KKNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_DANRE (Pre-mRNA-splicing factor 18 OS=Danio rerio GN=prpf18 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.963e-21
Identity = 43/81 (53.09%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            KK LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KKNLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_RAT (Pre-mRNA-splicing factor 18 OS=Rattus norvegicus GN=Prpf18 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.774e-20
Identity = 42/81 (51.85%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            K+ LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_PONAB (Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.774e-20
Identity = 42/81 (51.85%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            K+ LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_MOUSE (Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prpf18 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.774e-20
Identity = 42/81 (51.85%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            K+ LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_HUMAN (Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRPF18 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.774e-20
Identity = 42/81 (51.85%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            K+ LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_BOVIN (Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.774e-20
Identity = 42/81 (51.85%), Postives = 63/81 (77.78%), Query Frame = 2

Query:   11 KKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            K+ LP D ++++  +++  + R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET  KY+Q +K
Sbjct:  239 KRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLK 319

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_SCHPO (Pre-mRNA-splicing factor 18 OS=Schizosaccharomyces pombe GN=prp18 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.219e-14
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 2

Query:   14 KVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            + L DD  +++  +   C   +++ A D Y+RL IGNAPWPIGVTMVGIH RSA +++  N  ++I+ DE   K LQ++K
Sbjct:  246 EALNDDIFKSIAEICYRCQKHEFVKANDMYLRLTIGNAPWPIGVTMVGIHERSAHQRLQANPSSNILKDEKKRKCLQALK 325

[Close]

BLAST of DY475169 vs. SwissProt
Match: PRP18_YEAST (Pre-mRNA-splicing factor 18 OS=Saccharomyces cerevisiae GN=PRP18 PE=1 SV=3)

HSP 1 Score: 57.3806 bits (137), Expect = 2.657e-8
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 2

Query:   89 AMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIY-TNSVAHIMNDETTXKYLQSVK 253
            A+  Y++L+IGN  WPIGVT VGIH RSA  KI    + A+IM DE T  ++ S+K
Sbjct:  179 AVQSYMKLSIGNVAWPIGVTSVGIHARSAHSKIQGGRNAANIMIDERTRLWITSIK 234

[Close]

BLAST of DY475169 vs. TrEMBL
Match: B9S407_RICCO (Potassium channel regulatory factor, putative OS=Ricinus communis GN=RCOM_0557340 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.764e-37
Identity = 74/84 (88.10%), Postives = 78/84 (92.86%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC KKVLPDD RQAL ++VECC+ RDYLAAMDHYI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQSVK
Sbjct:  276 FCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 359

[Close]

BLAST of DY475169 vs. TrEMBL
Match: C5XCA3_SORBI (Putative uncharacterized protein Sb02g036950 OS=Sorghum bicolor GN=Sb02g036950 PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.690e-36
Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC KKVLPDD RQAL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  300 FCRKKVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 383

[Close]

BLAST of DY475169 vs. TrEMBL
Match: B9H894_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_559562 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.653e-35
Identity = 73/84 (86.90%), Postives = 75/84 (89.29%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            F  KK+LP D RQ L LMVECC+ RDYLAAMDHYIRLAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQSVK
Sbjct:  279 FSRKKILPSDIRQGLLLMVECCMRRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 362

[Close]

BLAST of DY475169 vs. TrEMBL
Match: Q6YTU8_ORYSJ (Os07g0571900 protein OS=Oryza sativa subsp. japonica GN=OJ1121_A05.19 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.819e-35
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC K+VLPDD RQAL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  299 FCRKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 382

[Close]

BLAST of DY475169 vs. TrEMBL
Match: C0PEI6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.819e-35
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC KKVLPDD R+AL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  302 FCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 385

[Close]

BLAST of DY475169 vs. TrEMBL
Match: B9FY09_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24813 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.819e-35
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC K+VLPDD RQAL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  283 FCRKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 366

[Close]

BLAST of DY475169 vs. TrEMBL
Match: B6T2W8_MAIZE (Prp18 domain containing protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.819e-35
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC KKVLPDD R+AL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  301 FCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 384

[Close]

BLAST of DY475169 vs. TrEMBL
Match: A2YMU9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26554 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.819e-35
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC K+VLPDD RQAL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  299 FCRKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 382

[Close]

BLAST of DY475169 vs. TrEMBL
Match: D7TDX5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_151.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001158001 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.203e-35
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC KKVL DD RQAL ++VECC+ RDYLAAMD YI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:   18 FCRKKVLQDDIRQALLVVVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 101

[Close]

BLAST of DY475169 vs. TrEMBL
Match: B6U5W5_MAIZE (Prp18 domain containing protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.203e-35
Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 2

Query:    2 FCXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            FC KKVLPDD R+AL ++VECC+ RDYLAAMD YI+L IGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQS+K
Sbjct:  240 FCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKLTIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 323

[Close]

BLAST of DY475169 vs. TAIR peptide
Match: AT1G03140.1 (| Symbols: | splicing factor Prp18 family protein | chr1:754471-756223 REVERSE LENGTH=420)

HSP 1 Score: 144.436 bits (363), Expect = 1.339e-35
Identity = 71/83 (85.54%), Postives = 73/83 (87.95%), Query Frame = 2

Query:    5 CXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYTNSVAHIMNDETTXKYLQSVK 253
            C KK LP D RQAL +MV  CI RDYLAAMDHYI+LAIGNAPWPIGVTMVGIH RSAREKIYTNSVAHIMNDETT KYLQSVK
Sbjct:  278 CRKKGLPADIRQALMVMVNHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 360

[Close]

BLAST of DY475169 vs. TAIR peptide
Match: AT1G54590.1 (| Symbols: | INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: splicing factor Prp18 family protein (TAIR:AT1G03140.1); Has 388 Blast hits to 388 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 132; Plants - 48; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). | chr1:20391560-20393457 REVERSE LENGTH=361)

HSP 1 Score: 117.857 bits (294), Expect = 1.342e-27
Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 2

Query:    5 CXKKVLPDDXRQALXLMVECCIGRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHXRSAREKIYT-NSVAHIMNDETTXKYLQSVK 253
            C  K LP D RQ L +MV C I RDYL A   +I+LAIGNAPWPIGVTMVGIH RSAREKI T +SVAHIMN+ETT KYLQSVK
Sbjct:  218 CRNKCLPADIRQGLMVMVNCWIKRDYLDATAQFIKLAIGNAPWPIGVTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVK 301

The following BLAST results are available for this feature:

BLAST of DY475169 vs. SwissProt
BLAST of DY475169 vs. TrEMBL
BLAST of DY475169 vs. TAIR peptide

BLAST of DY475169 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
PRP18_XENLA	7.963e-21	53.09	Pre-mRNA-splicing factor 18 OS=Xenopus laevis GN=p...	[more]
PRP18_DANRE	7.963e-21	53.09	Pre-mRNA-splicing factor 18 OS=Danio rerio GN=prpf...	[more]
PRP18_RAT	1.774e-20	51.85	Pre-mRNA-splicing factor 18 OS=Rattus norvegicus G...	[more]
PRP18_PONAB	1.774e-20	51.85	Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRP...	[more]
PRP18_MOUSE	1.774e-20	51.85	Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prp...	[more]
PRP18_HUMAN	1.774e-20	51.85	Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRP...	[more]
PRP18_BOVIN	1.774e-20	51.85	Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF1...	[more]
PRP18_SCHPO	7.219e-14	45.00	Pre-mRNA-splicing factor 18 OS=Schizosaccharomyces...	[more]
PRP18_YEAST	2.657e-8	51.79	Pre-mRNA-splicing factor 18 OS=Saccharomyces cerev...	[more]

BLAST of DY475169 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9S407_RICCO	8.764e-37	88.10	Potassium channel regulatory factor, putative OS=R...	[more]
C5XCA3_SORBI	9.690e-36	85.71	Putative uncharacterized protein Sb02g036950 OS=So...	[more]
B9H894_POPTR	1.653e-35	86.90	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q6YTU8_ORYSJ	2.819e-35	84.52	Os07g0571900 protein OS=Oryza sativa subsp. japoni...	[more]
C0PEI6_MAIZE	2.819e-35	84.52	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B9FY09_ORYSJ	2.819e-35	84.52	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6T2W8_MAIZE	2.819e-35	84.52	Prp18 domain containing protein OS=Zea mays PE=2 S...	[more]
A2YMU9_ORYSI	2.819e-35	84.52	Putative uncharacterized protein OS=Oryza sativa s...	[more]
D7TDX5_VITVI	8.203e-35	84.52	Whole genome shotgun sequence of line PN40024, sca...	[more]
B6U5W5_MAIZE	8.203e-35	83.33	Prp18 domain containing protein OS=Zea mays PE=2 S...	[more]

BLAST of DY475169 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G03140.1	1.339e-35	85.54	\| Symbols: \| splicing factor Prp18 family protein...	[more]
AT1G54590.1	1.342e-27	72.62	\| Symbols: \| INVOLVED IN: RNA splicing; LOCATED I...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004098	Prp18	GENE3D	1.20.940.10	no description	coord: 2..84 score: 3.3
IPR004098	Prp18	PFAM	PF02840	Prp18	coord: 3..84 score: 1
IPR004098	Prp18	SUPERFAMILY	47938	Functional domain of the splicing factor Prp18	coord: 1..84 score: 6.7
None	No IPR available	PANTHER	PTHR13007	PRE-MRNA SPLICING FACTOR-RELATED	coord: 2..84 score: 9.7
None	No IPR available	PANTHER	PTHR13007:SF6	POTASSIUM CHANNEL REGULATORY FACTOR	coord: 2..84 score: 9.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY475169 ID=DY475169; Name=DY475169; organism=Cicer arietinum; type=EST; length=255bp
GTTTTGTANGAAGAAGGTTCTTCCTGATGACNTTCGACAGGCGCTATNGT
TGATGGTTGAATGCTGTATTGGGCGAGATTATCTGGCTGCAATGGACCAT
TATATCAGGTTGGCTATCGGGAATGCTCCCTGGCCTATTGGTGTCACTAT
GGTTGGTATTCACNAAAGATCTGCCCGAGAAAAGATCTACACAAATAGTG
TTGCTCACATCATGAACGATGAGACAACTCNCAAGTACTTACAATCAGTA
AAGAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005681	spliceosomal complex

Vocabulary: **Biological Process**
Term	Definition
GO:0008380	RNA splicing

Vocabulary: **INTERPRO**
Term	Definition
IPR004098	Prp18

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