GR399445

EST Overview
NameGR399445
Unique NameGR399445
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length562
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR399445 vs. TrEMBL
Match: C6THR5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.451e-11
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  144 WVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAESECVEKSNGSSIICSSEIQILQEDHEAKYEEQ 401
            WVPPQPPPIAM ++A+AIRR KQ V  E    + S+A SSD++   NG       + +E +  +S++ S EIQ    +HE  YEE+
Sbjct:  428 WVPPQPPPIAMPEAAEAIRRPKQVVQEEVTLDDQSAAHSSDLT---NG---SKSEDAIEGNVVNSLVSSGEIQ----NHEVGYEEK 503          

HSP 2 Score: 28.4906 bits (62), Expect = 1.451e-11
Identity = 17/40 (42.50%), Postives = 23/40 (57.50%), Query Frame = 2
Query:   20 NEDDPLPYWLKRNVRILHIAQN-DSGGAPYGTASSRLPLQ 136
            N D+ +P+W  +NVRI  I    +  GAP   ASS  P+Q
Sbjct:  388 NGDNTVPWWQTKNVRIKEIDNEIEYNGAP--AASSPQPVQ 425          
BLAST of GR399445 vs. TrEMBL
Match: B9I3A0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_421624 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.568e-10
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  144 WVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAES-ECVEKSNGSSIICSSEIQ 362
            WVPP+PPP+ MA++A+AIRR KQ++  EQ+  + S +  +D + E+  I K +ES   VE + G S++ SSEIQ
Sbjct:  401 WVPPRPPPVVMAEAAEAIRRPKQSIQKEQLEDDRSVSHPTDTADELQRITKISESGGAVEINGGGSVLNSSEIQ 474          
BLAST of GR399445 vs. TrEMBL
Match: B9IER8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252078 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.632e-9
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3
Query:  144 WVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAES-ECVEKSNGSSIICSSEIQILQE 374
            WVPPQPPP+ M ++A+AIRR KQ++  EQ   + S +   D + E+  I K +ES   VE + G S++ SSEIQ  QE
Sbjct:  402 WVPPQPPPVVMPEAAEAIRRPKQSIQKEQSEDDQSVSHPIDTADELQRITKISESGGAVEINGGGSVLNSSEIQEEQE 479          
BLAST of GR399445 vs. TrEMBL
Match: B9RB25_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1510590 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.382e-8
Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 3
Query:  144 WVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAES-ECVEKSNGSSIICSSEIQILQEDHEAKYE 395
            WVPPQPPP+AMA++A+AIRR K +V  EQ  +  S +  +D + E+  I K AES   +  ++G S + S+EI   +E+ E  YE
Sbjct:  452 WVPPQPPPVAMAEAAEAIRRPKPSVQKEQSGEEQSKSLQTDATDELQKITKIAESGGGMGINDGGSELNSNEI---KEEQEINYE 533          
BLAST of GR399445 vs. TrEMBL
Match: D7SHS0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007750001 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.144e-8
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 3
Query:  144 WVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAES-ECVEKSNGSSIICSSEIQILQE 374
            WVPPQPPPIAM ++A AIR+ K ++  E +  + S ++ SD   E+  I K +ES   VE    SS + SSE+Q  QE
Sbjct:  446 WVPPQPPPIAMPEAAAAIRQPKSSIQRESLVNDQSVSRPSDEIDELQRITKISESGGVVEIKEESSGLNSSEMQQEQE 523          

HSP 2 Score: 25.409 bits (54), Expect = 2.144e-8
Identity = 12/36 (33.33%), Postives = 17/36 (47.22%), Query Frame = 2
Query:   29 DPLPYWLKRNVRILHIAQNDSGGAPYGTASSRLPLQ 136
            D   +W ++N RI  I   D       TAS+  P+Q
Sbjct:  408 DSSTWWQQKNARITEIETEDEPRTASYTASNEQPIQ 443          
BLAST of GR399445 vs. TrEMBL
Match: A5AW25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005839 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.144e-8
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 3
Query:  144 WVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAES-ECVEKSNGSSIICSSEIQILQE 374
            WVPPQPPPIAM ++A AIR+ K ++  E +  + S ++ SD   E+  I K +ES   VE    SS + SSE+Q  QE
Sbjct:  446 WVPPQPPPIAMPEAAAAIRQPKSSIQRESLVNDQSVSRPSDEIDELQRITKISESGGVVEIKEESSGLNSSEMQQEQE 523          

HSP 2 Score: 25.409 bits (54), Expect = 2.144e-8
Identity = 12/36 (33.33%), Postives = 17/36 (47.22%), Query Frame = 2
Query:   29 DPLPYWLKRNVRILHIAQNDSGGAPYGTASSRLPLQ 136
            D   +W ++N RI  I   D       TAS+  P+Q
Sbjct:  408 DSSTWWQQKNARITEIETEDEPRTASYTASNEQPIQ 443          
BLAST of GR399445 vs. TAIR peptide
Match: AT5G62810.1 (| Symbols: PEX14, ATPEX14, PED2 | peroxin 14 | chr5:25220323-25223571 FORWARD LENGTH=507)

HSP 1 Score: 52.7582 bits (125), Expect = 1.497e-7
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  111 LHPVDFHYNSVWVPPQPPPIAMADSAQAIRRAKQAVS*EQVSKNPSSAQSSDISGEVNGIPKPAESECVEKSNGSSIICSSEIQILQEDHEAKYE 395
            + P  F     WVPPQPPP+AMA++ +AIRR K     +Q  +  +S   S +S E+  I K +ES      +GS  I  +EIQ   E      E
Sbjct:  417 MEPAAFQRQRSWVPPQPPPVAMAEAVEAIRRPKPQAKIDQ--EAAASDGQSGVSDELQKITKFSES----GGDGSGGIKIAEIQEETEQQHISQE 505          
The following BLAST results are available for this feature:
BLAST of GR399445 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
C6THR5_SOYBN1.451e-1144.19Putative uncharacterized protein OS=Glycine max PE... [more]
B9I3A0_POPTR9.568e-1045.95Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9IER8_POPTR1.632e-946.15Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9RB25_RICCO1.382e-843.53Putative uncharacterized protein OS=Ricinus commun... [more]
D7SHS0_VITVI2.144e-844.87Whole genome shotgun sequence of line PN40024, sca... [more]
A5AW25_VITVI2.144e-844.87Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of GR399445 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G62810.11.497e-736.84| Symbols: PEX14, ATPEX14, PED2 | peroxin 14 | chr... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR399445 ID=GR399445; Name=GR399445; organism=Cicer arietinum; type=EST; length=562bp
CCTTTATATCACTCCATCCAATGAGGATGACCCGCTGCCCTACTGGCTGA
AGAGAAATGTCCGAATCTTACACATTGCCCAAAATGACTCTGGTGGAGCA
CCTTATGGTACTGCATCCAGTCGACTTCCACTACAACTCTGTGTGGGTTC
CTCCTCAACCTCCACCGATAGCTATGGCAGATTCTGCTCAAGCAATCAGG
CGGGCAAAACAAGCTGTCTCATAAGAACAGGTGTCAAAGAATCCTTCATC
AGCTCAATCTTCTGACATCTCTGGTGAGGTGAATGGAATCCCAAAACCGG
CGGAATCTGAATGTGTAGAGAAAAGCAATGGCAGCTCAATTATCTGCTCT
AGTGAGATACAAATCTTACAAGAAGACCATGAAGCCAAATATGAAGAGCA
GTGAAGGTGAATTATTATCTATCATGAATACACATGAAGTTGGAAATACA
GCTTGAAGTATTCCCAAATTCTGGATAAACTGAATACAGCTTTTGTTTCA
TAAACTCGACATCAATACAAGATGCAAATGCGGGTCTCTTTTTTAAGAAA
AGAAAAAGAAAG
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