GR408129

EST Overview
NameGR408129
Unique NameGR408129
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length472
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR408129 vs. TrEMBL
Match: B9SUQ3_RICCO (Taxilin, putative OS=Ricinus communis GN=RCOM_0714650 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.037e-13
Identity = 57/152 (37.50%), Postives = 75/152 (49.34%), Query Frame = 3
Query:   84 MQNPDANQLPEVDSLPDGFVEGTAELVAPATPTPEQEKPLSDYKEDR--------------SLNRHLSNESSN---------------MLGEKELQNNHGTHITSPPASAVSESLL--PRCCEVKEQPQGECQSSDKSKQ-PSETKALPLKD 443
            M N DANQLPEVDSLPDGFV+G+ E +AP TP  EQEKPLS   +D               S N   +++ SN               ++    ++   GT      A+ VS + +    C E+ EQ  G CQSSD+S Q  S T A  +K+
Sbjct:    1 MDNVDANQLPEVDSLPDGFVDGSIESLAPPTPPFEQEKPLSVRNKDSISEIVHPTGGLPEFSANESQTSQESNEKVGNMRTLFDASVLIVDHAHVEQVEGTATILDSANLVSNTSIEVSGCSELNEQVSGNCQSSDRSVQGGSSTYATDVKE 152          
BLAST of GR408129 vs. TrEMBL
Match: B9HU43_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_567576 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.355e-12
Identity = 57/152 (37.50%), Postives = 72/152 (47.37%), Query Frame = 3
Query:   84 MQNPDANQLPEVDSLPDGFVEGTAELVAPATPTPEQEKPLSDYKEDRSLNR--HLSNESSNMLGEKELQNNHGT-----------------------HITSPP-----------ASAVSESLLP-------RCCEVKEQPQGECQSSDKSKQ 410
            M+N  ANQLPEVDSLPDGFV+ + E VAP TPT EQEKP+SD KED S+ +  H+S     +   +   + +GT                       H+   P              V + L+P       RC EV E  QG  QSSD+S Q
Sbjct:    1 MENRVANQLPEVDSLPDGFVDSSMEPVAPQTPTSEQEKPVSDCKED-SIGKVDHVSEALQELAANESQTSQNGTEKPEKMRNFPVPLSDIDGCDASVHLVVEPDQGAWQEEGTLTKPVLDDLVPEASVGVSRCSEVIE-VQGSSQSSDRSTQ 150          
BLAST of GR408129 vs. TrEMBL
Match: D7TMC5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016314001 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.886e-9
Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 3
Query:   84 MQNPDANQLPEVDSLPDGFVEGTAELVAPATPTPEQEKPLSDYKEDRSLNRHLSNESSN 260
            M+N  ANQLPEVDSLPDGFVE +AE VAP TPT ++E   SDYK+        SN+  N
Sbjct:    1 MENTAANQLPEVDSLPDGFVESSAEPVAPPTPTLDKE---SDYKDSNFSTTEPSNDLEN 56          
BLAST of GR408129 vs. TrEMBL
Match: A5C4P8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020473 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.311e-8
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 3
Query:   81 KMQNPDANQLPEVDSLPDGFVEGTAELVAPATPTPEQEKPLSDYKEDRSLNRHLSNESSN 260
            +M+N  ANQLPEVDSLPDGFVE + E VAP TPT ++E   SDYK+        SN+  N
Sbjct:   20 EMENTAANQLPEVDSLPDGFVESSVEPVAPPTPTLDKE---SDYKDSNFSTTEPSNDLEN 76          
The following BLAST results are available for this feature:
BLAST of GR408129 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9SUQ3_RICCO1.037e-1337.50Taxilin, putative OS=Ricinus communis GN=RCOM_0714... [more]
B9HU43_POPTR4.355e-1237.50Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TMC5_VITVI5.886e-957.63Whole genome shotgun sequence of line PN40024, sca... [more]
A5C4P8_VITVI1.311e-855.00Putative uncharacterized protein OS=Vitis vinifera... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 47..62
score
NoneNo IPR availablePANTHERPTHR16127TAXILINcoord: 6..27
score: 1.6
NoneNo IPR availablePANTHERPTHR16127:SF5TAXILINcoord: 6..27
score: 1.6
NoneNo IPR availableSEGsegsegcoord: 4..21
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR408129 ID=GR408129; Name=GR408129; organism=Cicer arietinum; type=EST; length=472bp
TTTTTCAAACAACGAAAAGGGTTGCTTCAGTTCTTGACAGTCATACCTAG
ACAACTTTATACAAAGAAGAAACATAAGGCAAAATGCAGAATCCAGATGC
AAACCAGCTTCCTGAAGTTGATTCATTGCCAGATGGATTTGTTGAAGGAA
CTGCAGAACTTGTTGCACCTGCAACTCCAACTCCTGAACAAGAGAAGCCC
CTCAGTGATTACAAGGAGGACAGATCCTTAAATCGCCATCTTTCTAATGA
ATCATCAAACATGTTGGGAGAAAAGGAGCTTCAAAACAATCACGGTACGC
ATATTACGTCTCCACCAGCTAGTGCTGTTTCCGAGTCTCTACTACCCAGA
TGTTGTGAGGTAAAAGAGCAACCGCAAGGAGAATGCCAAAGTTCAGATAA
ATCAAAACAACCTTCGGAGACAAAAGCACTGCCTCTAAAGGATGCATGTG
CTCCAGGGATGGTTGATTCTCC
back to top