GR410076

EST Overview
NameGR410076
Unique NameGR410076
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length682
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR410076 vs. TrEMBL
Match: C6TKC7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.156e-18
Identity = 60/119 (50.42%), Postives = 72/119 (60.50%), Query Frame = -2
Query:  121 DHRDATTATHMFPEIASTTAKGFFFDEIQ--QIDKPLITNHHSTAPVSTYFQQQISQGEENLTIKGEIGTCSS---LRGEEIMEGE---FSTLNFHPCHYFQLATIAFFKCFGLDSTFD 453
            DH      T   P   +T++  FFFD+IQ  QID P  TNH S+    T+    + QG +NL +KGEI T  S    R EEIME E    ++L FHPCHYFQLAT+AF KCFGLDST D
Sbjct:   47 DHHHNNLVTADTPPPPTTSSSVFFFDDIQIQQIDSPF-TNHDSSP---THPPTTLQQGGQNLLLKGEIATGPSPSMRREEEIMEEEEEEAASLYFHPCHYFQLATVAFLKCFGLDSTSD 161          
BLAST of GR410076 vs. TrEMBL
Match: B9H5A7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558617 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.340e-13
Identity = 52/149 (34.90%), Postives = 71/149 (47.65%), Query Frame = -2
Query:  121 DELRVESYRIPWXXXXXXXXXXXXXXXXXXXXXLDSDHRDATTATHMFPEIASTTAKGFFFDEIQQIDKPLITNHHSTAPVSTYFQQQISQGEENLTIKGEIGTCSSLR--GEEIMEGEFSTLNFHPCHYFQLATIAFFKCFGLDSTFD 561
            DEL VE YRIPW                       SD  D TT++      A+ +A G F      +DK  + ++  T   +   Q   SQ  +N +IKGEI T +  R   E+      + ++FHPC+YF+LA +AF KCFGLDS  D
Sbjct:    6 DELTVEGYRIPWLIWIQILILVLLVILLFCFSFFPSDLSDTTTSSSS----AAPSAVGVFMPLNSNLDKQTLEHNDHTTTATDCLQH--SQVHQNKSIKGEITTNTGRRIVSEDNFGNSANFIDFHPCNYFRLAKLAFLKCFGLDSMSD 148          
BLAST of GR410076 vs. TrEMBL
Match: B9SRQ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0666220 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 5.965e-9
Identity = 52/160 (32.50%), Postives = 72/160 (45.00%), Query Frame = -2
Query:  133 DELRVESYRIPWXXXXXXXXXXXXXXXXXXXXXLDSDHRDATTATHM--------FPEIASTTAKGFFFDEIQQIDKPLITNHHS--TAPVSTYFQQQISQGEENLTIKGEIGTCSS---LRGEEIMEGE-FST---LNFHPCHYFQLATIAFFKCFGLD 561
            + L VESYRIPW                       S      T T          FP  +S+++          ++K    N H+  T  V+   QQ  +Q   + +IKGEI T +S   +R   + EGE FST   ++FHPC+YF+LA +AF KC GLD
Sbjct:    6 ESLTVESYRIPWLIWIQILIFILLLFLFYCFSVFTSSDLSLNTTTSSNNSSSISSFPPPSSSSSTS-----ASSLNKATGLNKHNSNTTTVTNLLQQHHNQIGGSQSIKGEIATSTSRTVVREGNVTEGEGFSTNSVIDFHPCNYFRLAKLAFLKCLGLD 160          
The following BLAST results are available for this feature:
BLAST of GR410076 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C6TKC7_SOYBN3.156e-1850.42Putative uncharacterized protein OS=Glycine max PE... [more]
B9H5A7_POPTR2.340e-1334.90Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SRQ8_RICCO5.965e-932.50Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 53..74
score: NAcoord: 188..200
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR410076 ID=GR410076; Name=GR410076; organism=Cicer arietinum; type=EST; length=682bp
TATTAAAATGACAACCTTTCTTCTTTTTCTTTTTTTTTATTCCACAAATG
ATATCGAACAATAACATAATTTTGGTACTCAACTTTCTTTTCTTTTTCTA
CGTTTTCGATTTGACGACGAATCAAACGTGGAATCAAGGCCAAAACATTT
GAAAAATGCAATTGTGGCTAATTGGAAATAATGGCAAGGGTGGAAATTCA
ATGTTGAAAACTCCCCCTCCATAATCTCTTCGCCTCTCAAGCTTGAACAT
GTTCCTATCTCTCCTTTAATAGTTAGGTTCTCTTCACCCTGCGAAATCTG
TTGTTGAAAGTAAGTTGAAACAGGGGCAGTTGAATGATGGTTTGTTATCA
GTGGTTTGTCAATCTGTTGAATCTCATCGAAAAAGAAGCCTTTAGCGGTG
GTGGATGCAATTTCCGGGAACATGTGGGTGGCGGTGGTGGCGTCACGGTG
GTCGGAATCTAAGACAGTGAAGAAATAAAAGAGTGCAAGGAGGAGAAAGA
GGATTATTAATTGAATCCAAATCAACCATGGAATTCTATAGCTCTCTACT
CTTAGTTCGTCCAGCATGTTAATTTGTGCACATGTGATTTGAATTTGATT
ATTATGATAAGAAAAAATTATGAAGGGAGAGAAAAGTTGTGTGTGGTTTT
GGGGAGAGAGGATAGGAAAAGTTTTAGTGTGC
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