GR916428

EST Overview
NameGR916428
Unique NameGR916428
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length365
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR916428 vs. SwissProt
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.417e-9
Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            Q +CPID LKLGACVDV             AKQTCCPLL GLVDLDAA+
Sbjct:  258 QPTCPIDALKLGACVDVLGGLIHIGIGGS-AKQTCCPLLGGLVDLDAAI 305          
BLAST of GR916428 vs. TrEMBL
Match: Q40336_MEDSA (Proline-rich cell wall protein OS=Medicago sativa PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8
Identity = 32/49 (65.31%), Postives = 34/49 (69.39%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            QQ+C ID LKLGACVDV             AKQTCCPLLQGLVDLDAA+
Sbjct:  294 QQTCSIDALKLGACVDVLGGLIHIGIGGS-AKQTCCPLLQGLVDLDAAI 341          
BLAST of GR916428 vs. TrEMBL
Match: O24102_MEDTR (MtN4 protein (Fragment) OS=Medicago truncatula GN=MtN4 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8
Identity = 32/49 (65.31%), Postives = 34/49 (69.39%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            QQ+C ID LKLGACVDV             AKQTCCPLLQGLVDLDAA+
Sbjct:  162 QQTCSIDALKLGACVDVLGGLIHIGIGGS-AKQTCCPLLQGLVDLDAAI 209          
BLAST of GR916428 vs. TrEMBL
Match: D7TUG8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_17.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015895001 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.495e-8
Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            QQ+CPID LKLGACVD+             AK TCCP+LQGLVDLDAA+
Sbjct:   49 QQTCPIDTLKLGACVDLLGGLVHIGIGSS-AKDTCCPVLQGLVDLDAAV 96          
BLAST of GR916428 vs. TrEMBL
Match: B9S3J8_RICCO (Repetitive proline-rich cell wall protein 2, putative OS=Ricinus communis GN=RCOM_0670360 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.109e-7
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  214 EQQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            +Q++CPID LKLGACVDV             AK  CCP+LQGLVDLDAAL
Sbjct:  212 KQETCPIDTLKLGACVDVLGGLIHIGIGSS-AKDACCPVLQGLVDLDAAL 260          
BLAST of GR916428 vs. TrEMBL
Match: O24300_PEA (PtxA protein OS=Pisum sativum GN=ptxA PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.892e-7
Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            Q +C ID LKLGACVDV             AKQTCCPLLQGLVDLDAA+
Sbjct:  265 QPTCSIDALKLGACVDVLGGLIHIGIGGS-AKQTCCPLLQGLVDLDAAV 312          
BLAST of GR916428 vs. TrEMBL
Match: B9NF54_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1120010 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.228e-7
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  214 EQQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            +Q++CPID LKLGACVDV             AK  CCPLL+GLVDLDAA+
Sbjct:   92 KQETCPIDTLKLGACVDVLGGLIHIGIGSS-AKDECCPLLEGLVDLDAAV 140          
BLAST of GR916428 vs. TrEMBL
Match: A9PF92_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.228e-7
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  214 EQQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            +Q++CPID LKLGACVDV             AK  CCPLL+GLVDLDAA+
Sbjct:   92 KQETCPIDTLKLGACVDVLGGLIHIGIGSS-AKDECCPLLEGLVDLDAAV 140          
BLAST of GR916428 vs. TrEMBL
Match: Q39353_BRANA (Cell wall-plasma membrane linker protein OS=Brassica napus GN=PRP PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.216e-7
Identity = 27/48 (56.25%), Postives = 32/48 (66.67%), Query Frame = 1
Query:  220 QSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            ++CPID LKLGACVDV             AK+ CCP+L GLVDLDAA+
Sbjct:  290 ETCPIDTLKLGACVDVLGGLIHIGLGGSSAKKECCPVLGGLVDLDAAV 337          
BLAST of GR916428 vs. TrEMBL
Match: B9HCF3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_417432 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.216e-7
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            Q++CPID LKLGACVDV             AK  CCPLL+GLVDLDAA+
Sbjct:    1 QETCPIDTLKLGACVDVLGGLIHIGIGSS-AKDECCPLLEGLVDLDAAV 48          
BLAST of GR916428 vs. TrEMBL
Match: C6TIZ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.191e-7
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 1
Query:  217 QQSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            Q +CPID LKLGACVDV             A+QTCCP+L GLVDLDAA+
Sbjct:  120 QPTCPIDTLKLGACVDVLGGLIHIGIGSS-AQQTCCPVLAGLVDLDAAV 167          
BLAST of GR916428 vs. TAIR peptide
Match: AT3G22120.1 (| Symbols: CWLP | cell wall-plasma membrane linker protein | chr3:7795283-7796287 REVERSE LENGTH=334)

HSP 1 Score: 55.8398 bits (133), Expect = 6.681e-9
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 1
Query:  220 QSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            ++CPID LKLGACVDV             AK  CCP+L GL+DLDAA+
Sbjct:  248 ETCPIDTLKLGACVDVLGGLIHIGLGKSHAKAECCPVLGGLLDLDAAV 295          
BLAST of GR916428 vs. TAIR peptide
Match: AT4G15160.2 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:8646192-8647019 FORWARD LENGTH=193)

HSP 1 Score: 53.5286 bits (127), Expect = 3.316e-8
Identity = 26/48 (54.17%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  220 QSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            ++CPID LKLGACVDV             AK  CCPLL  LV LDAA+
Sbjct:   97 ETCPIDALKLGACVDVLGGLIHIGLGKSYAKAKCCPLLDDLVGLDAAV 144          
BLAST of GR916428 vs. TAIR peptide
Match: AT4G15160.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:8646192-8647019 FORWARD LENGTH=275)

HSP 1 Score: 53.5286 bits (127), Expect = 3.316e-8
Identity = 26/48 (54.17%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  220 QSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            ++CPID LKLGACVDV             AK  CCPLL  LV LDAA+
Sbjct:  179 ETCPIDALKLGACVDVLGGLIHIGLGKSYAKAKCCPLLDDLVGLDAAV 226          
BLAST of GR916428 vs. TAIR peptide
Match: AT3G15010.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:5052844-5054058 FORWARD LENGTH=404)

HSP 1 Score: 51.9878 bits (123), Expect = 9.648e-8
Identity = 25/43 (58.14%), Postives = 27/43 (62.79%), Query Frame = -1
Query:   18 YRLSSSGGMQAGGYPESGHY---SSSGYQNQHHPPAGESPVPR 137
            YR+  S     GGYPESGHY   SS+GY  QHH   G SPVPR
Sbjct:  348 YRMPPSSMPGGGGYPESGHYGLSSSAGYPGQHHQAVGTSPVPR 390          
BLAST of GR916428 vs. TAIR peptide
Match: AT3G15010.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:5052844-5054058 FORWARD LENGTH=404)

HSP 1 Score: 51.9878 bits (123), Expect = 9.648e-8
Identity = 25/43 (58.14%), Postives = 27/43 (62.79%), Query Frame = -1
Query:   18 YRLSSSGGMQAGGYPESGHY---SSSGYQNQHHPPAGESPVPR 137
            YR+  S     GGYPESGHY   SS+GY  QHH   G SPVPR
Sbjct:  348 YRMPPSSMPGGGGYPESGHYGLSSSAGYPGQHHQAVGTSPVPR 390          
BLAST of GR916428 vs. TAIR peptide
Match: AT3G22142.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:7803604-7808046 REVERSE LENGTH=1480)

HSP 1 Score: 51.6026 bits (122), Expect = 1.260e-7
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1
Query:  220 QSCPIDVLKLGACVDVXXXXXXXXXXXXXAKQTCCPLLQGLVDLDAAL 363
            ++CPID LKLG+CVD+             AK+ CCP+++GLVDLDAA+
Sbjct: 1395 KTCPIDTLKLGSCVDLLGGLVHIGIGKS-AKEKCCPVVEGLVDLDAAV 1441          
The following BLAST results are available for this feature:
BLAST of GR916428 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PRF1_SOLLC5.417e-963.2736.4 kDa proline-rich protein OS=Solanum lycopersi... [more]
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BLAST of GR916428 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q40336_MEDSA2.920e-865.31Proline-rich cell wall protein OS=Medicago sativa ... [more]
O24102_MEDTR2.920e-865.31MtN4 protein (Fragment) OS=Medicago truncatula GN=... [more]
D7TUG8_VITVI8.495e-861.22Whole genome shotgun sequence of line PN40024, sca... [more]
B9S3J8_RICCO1.109e-760.00Repetitive proline-rich cell wall protein 2, putat... [more]
O24300_PEA1.892e-763.27PtxA protein OS=Pisum sativum GN=ptxA PE=3 SV=1[more]
B9NF54_POPTR3.228e-758.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PF92_POPTR3.228e-758.00Putative uncharacterized protein OS=Populus tricho... [more]
Q39353_BRANA4.216e-756.25Cell wall-plasma membrane linker protein OS=Brassi... [more]
B9HCF3_POPTR4.216e-759.18Predicted protein (Fragment) OS=Populus trichocarp... [more]
C6TIZ0_SOYBN7.191e-759.18Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of GR916428 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT3G22120.16.681e-954.17| Symbols: CWLP | cell wall-plasma membrane linker... [more]
AT4G15160.23.316e-854.17| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
AT4G15160.13.316e-854.17| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
AT3G15010.29.648e-858.14| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT3G15010.19.648e-858.14| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT3G22142.11.260e-750.00| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013770Plant lipid transfer protein/hydrophobic protein, helical domainGENE3D1.10.110.10no descriptioncoord: 47..94
score: 4.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storageSUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 51..94
score: 9.1
NoneNo IPR availableSEGsegsegcoord: 22..44
score: NAcoord: 63..75
score
NoneNo IPR availableSEGsegsegcoord: 53..77
score
NoneNo IPR availableSEGsegsegcoord: 30..55
score
NoneNo IPR availableSEGsegsegcoord: 8..21
score: NAcoord: 40..64
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR916428 ID=GR916428; Name=GR916428; organism=Cicer arietinum; type=EST; length=365bp
GATTAGCGTGGTCGCGGCCGAGGTACAGGTGACTCCCCGGCAGGAGGATG
ATGCTGATTCTGATAACCCGATGAACTATAGTGTCCACTTTCAGGATACC
CACCAGCTTGCATTCCACCTGAACTCGATAATCTATACATGGAACCAGCA
CTACCCAAACCACCAGCGGAACCACCATGTCCGCCACCAGCACCAGCACC
AGCACCACCACCAGAACAACAAAGTTGTCCAATAGATGTATTGAAGTTGG
GTGCATGTGTTGATGTGCTTGGTAGCCTAATACATATTGGAATAGGTGGT
AGTAGTGCTAAACAAACATGTTGTCCATTGCTTCAAGGACTTGTGGATTT
GGATGCTGCTCTTTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: INTERPRO
TermDefinition
IPR013770Plant lipid transfer protein/hydrophobic protein helical domain
IPR016140Bifunc_inhib/LTP/seed_store