HO062396

EST Overview
NameHO062396
Unique NameHO062396
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length431
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of HO062396 vs. TrEMBL
Match: D7LK11_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903726 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.229e-7
Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = -3
Query:  166 RYARRAFLNSYHFNLERENGSFKEKTKRSMKEVNEGAMRVVLGMRRGMHKRRLGIRAYRVTMALPSMFLVTMRCFMPWFNKKD 414
            R  RR  L SY   +  E  SFKEK ++SMK +NE A R V  +R+G  KRR  IR  R  +   S F+ ++ CF P    +D
Sbjct:   29 RDGRRVVLASYDL-MGSERFSFKEKLRKSMKGINESAERWVSEVRQGTTKRRFAIRVLRTKLGFYSCFIRSVGCFTPCVGHRD 110          
BLAST of HO062396 vs. TrEMBL
Match: B9HH37_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763813 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.507e-7
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = -3
Query:  208 RYARRAFLNSYHFNLERENGSFKEKTKRSMKEVNEGAMRVVLGMRRGMHKRRLGIRAYRVTMALPSMFL 414
            R ARRAFL+SYHF+   ENG  ++K +RS+KE+NE    VV  +R  + KRR+ I+  R ++ LP + L
Sbjct:   39 RNARRAFLSSYHFS--EENG-IRDKLRRSVKEINEVVRGVVSDIREEICKRRIRIKVCRFSLGLPCLIL 104          
BLAST of HO062396 vs. TAIR peptide
Match: AT2G43390.1 (| Symbols: | unknown protein; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18020500-18020844 REVERSE LENGTH=114)

HSP 1 Score: 55.0694 bits (131), Expect = 1.760e-8
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = -3
Query:  166 RYARRAFLNSYHFNLERENGSFKEKTKRSMKEVNEGAMRVVLGMRRGMHKRRLGIRAYRVTMALPSMFLVTMRCFMPWFNKKD 414
            R  RR  L SY   +  E  SFKEK ++SMK +NE A R V  +R+G  KRR  IR  R  +   S F+ ++ CF      KD
Sbjct:   29 RDGRRIVLASYDL-MGSERFSFKEKLRKSMKGMNESAERWVSEVRQGTTKRRFAIRVLRTKLGFYSCFIRSVGCFTSCVGHKD 110          
The following BLAST results are available for this feature:
BLAST of HO062396 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
D7LK11_ARALY3.229e-740.96Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9HH37_POPTR5.507e-746.38Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of HO062396 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G43390.11.760e-840.96| Symbols: | unknown protein; Has 7 Blast hits to... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062396 ID=HO062396; Name=HO062396; organism=Cicer arietinum; type=EST; length=431bp
GATATGTATGAAATGGTAAAATGTATCGTAGGAAGAAATTATCATTCTTC
CAAATTAAAAATAAACATGATTCATCTTTAAATTTTAACTCAACTGATAA
ATGTCGATATTATTAGGTTGAACGTTCCAGATTTAAATATATGATAAGTC
TTTTTATTATATAATATCTTTTTTATTAAACCATGGCATAAAACATCTCA
TGGTAACAAGAAACATGGAGGGTAAAGCCATTGTGACCCTATAAGCCCTA
ATTCCAAGCCTTCTCTTGTGCATCCCTCTACGCATACCCAAAACAACTCT
CATTGCACCTTCATTGACCTCTTTCATTGACCTTTTCGTCTTCTCCTTGA
AACTACCATTTTCTCTTTCCAAATTGAAATGATAACTATTAAGAAATGCT
CGCCTCGCGTACCTGCCCGGGCGGCCGCTCG
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