HO063359

EST Overview


Name	HO063359
Unique Name	HO063359
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	655

Libraries


Library Name	Type
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of HO063359 vs. TrEMBL
Match: D2CPV3_VICFA (Putative ethylene responsive factor OS=Vicia faba GN=ERF2 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 7.690e-12
Identity = 41/113 (36.28%), Postives = 53/113 (46.90%), Query Frame = 3

Query:   27 GTFHCATRYEKXXXXXXXXXXXXXXXXNFPDAAV------TASPPANKRCL--NPDQASSQ-SSYEPIGLGE---GMDIKDQISQLEWILGLKHELPQ-----AQVEAQPKPT 314
            GTF  A +  +                NFPDA V        +PP  KRC+  N DQ  +Q +S E     E    M+IK ++S LEWIL L++ELPQ      Q +AQ  PT
Sbjct:  149 GTFSTAEQAARAYDAAAKRIRGDKAKLNFPDAPVCYAARAVTAPPTKKRCVSYNSDQVGTQQTSSESAASSEFDQEMEIKKKMSDLEWILDLENELPQFPQSLVQTQAQAIPT 261

HSP 2 Score: 41.9726 bits (97), Expect = 7.690e-12
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 2

Query:  305 QAHI*ASHFTLPDAADWDNSFLDLWNLEEMVMPMSNMIY 421
            QA    + FT+P  AD+DN+FLD W  EEMV P+ N+I+
Sbjct:  255 QAQAIPTPFTMP--ADFDNNFLDAWTFEEMVDPIHNLIF 291

The following BLAST results are available for this feature:

BLAST of HO063359 vs. TrEMBL

BLAST of HO063359 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
D2CPV3_VICFA	7.690e-12	36.28	Putative ethylene responsive factor OS=Vicia faba ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 20..35 score
None	No IPR available	SEG	seg	seg	coord: 15..26 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO063359 ID=HO063359; Name=HO063359; organism=Cicer arietinum; type=EST; length=655bp
TTCGATTTCGAGCGGCCGCCCGGGCAGGTACATTTCATTGTGCTACAAGA
TACGAAAAAGTGGAAGAGGATGTGGATGGACAGGGTGTTGTTGAGTGTGT
TTGTGTCAATTTCCCCGATGCCGCTGTCACCGCTTCTCCGCCAGCGAACA
AACGCTGCCTCAACCCCGATCAGGCTAGCTCTCAATCTAGCTATGAGCCC
ATCGGGCTTGGCGAGGGAATGGATATCAAGGACCAAATCTCGCAACTTGA
ATGGATCCTTGGCTTAAAACACGAACTGCCTCAGGCCCAAGTTGAGGCCC
AGCCCAAGCCCACATCTGAGCCTCCCATTTTACCCTACCTGATGCTGCTG
ACTGGGACAACAGCTTTTTGGATTTGTGGAATCTTGAAGAAATGGTTATG
CCAATGAGTAACATGATTTACTAGGAAATTACAAAAATGAAACACTTCGG
TGTTTTATTATCGGTTTAGTTATTAATTACTATGTTTATTTTAAAAATTT
GACTGTATAAACTATGTTTTTATGCTTTCTTCGTTTGTGGTGTTGTCTCC
TTTGGTTGTGTCTTGGACGGTTGGATGATTGAACTTATATATGCTTTTTA
TGTATGATTGTGAATATGATTATTAGAAATAAAGTAAGGTGTATTACACT
AAAAC

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