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EST Overview
Name | HO066679 |
Unique Name | HO066679 |
Type | EST |
Organism | Cicer arietinum (chickpea) |
Sequence length | 553 |
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 15..32 score: NAcoord: 57..71 score |
None | No IPR available | SEG | seg | seg | coord: 9..22 score: NAcoord: 28..45 score |
None | No IPR available | SEG | seg | seg | coord: 9..20 score |
None | No IPR available | SEG | seg | seg | coord: 1..33 score: NAcoord: 37..49 score |
None | No IPR available | SEG | seg | seg | coord: 3..17 score: NAcoord: 41..59 score |
IPR009518 | Photosystem II PsbX | PFAM | PF06596 | PsbX | coord: 30..67 score: 2.4 |
Properties
Property Name | Value |
Singlet in analysis | Cicer arietinum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >HO066679 ID=HO066679; Name=HO066679; organism=Cicer arietinum; type=EST; length=553bp AATAAATTTTTTATATGTTAAAAGTTATTCAATATATGACAACTTTTCAA TGNAAAACTTTAACAATTTTTGAATTCGGCCAGTAACATTCTTTCTATAT TCCAAGAGCGATCTAGACATTCTCATAGACCACACAAACAAAGCTTCTTA CACTATGTTTGCAGNGGCTTGNTAATCAATGAATTATTCAAGATGGAAGT TGAAAGTTGAATACATAGGAAGTAACGGNAGTTGATTACTGAAAAGNGAG ATTATTACNCNCAACACAGATTTCATTGACAATAGACTTATAGAGATATG ATGATGAGAGAGAAATACTAAAATCCCCACTAAGCCTCAAAAGCTCTTCA GCTTCGCTTAACAGGATCGAAATTGGCAACNCCAATAACAGCACCAACAA TGGCAACAGCAACAAGTCCACCAGCACCTATGCTGAGCAAGAAATTCTTG AGAGAAGGNGAAACAGAAGCAGCTTCAGCCACATTGGGAGCCATCATTGA AGCTGTTAATGCAGCTGCTGTAACTCCTGNTACAACCCCGCGTACCTGCC CGA back to top
Annotated Terms
The
following terms have been associated with
this EST:
Vocabulary: Cellular Component
Term | Definition |
GO:0009523 | photosystem II |
GO:0016020 | membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0015979 | photosynthesis |
Vocabulary: INTERPRO
Term | Definition |
IPR009518 | PSII_PsbX |
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