FE668953

EST Overview


Name	FE668953
Unique Name	FE668953
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	261

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE668953 vs. SwissProt
Match: TMCO4_HUMAN (Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.721e-14
Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            IG+SLGARVI+ CL+ +A+ ++   ++E V+LLGAP+  + ++W+  RK+V+GR IN Y R DW+L   +R
Sbjct:  401 IGFSLGARVIYFCLQEMAQEKDCQGIIEDVILLGAPVEGEAKHWEPFRKVVSGRIINGYCRGDWLLSFVYR 471

[Close]

BLAST of FE668953 vs. SwissProt
Match: YELD_SCHPO (Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe GN=SPAC6F6.13c PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.828e-13
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +GYSLGARVI+ CL  L E +    ++E V L G P+  K  +W  A  +V+GRF+N Y + DW+LG  FR
Sbjct:  573 VGYSLGARVIYYCLREL-EKKKEFSIIENVYLFGTPVIFKRTSWLKAASVVSGRFVNGYKKNDWILGYLFR 642

[Close]

BLAST of FE668953 vs. SwissProt
Match: TMCO4_MOUSE (Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.694e-13
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            IG+SLGARVI+ CL+ +A+ ++   ++E VVLLGAP+    ++W+  R +V+GR IN Y R DW+L   +R
Sbjct:  398 IGFSLGARVIYFCLQEMAQEQDCQGIIEDVVLLGAPVEGDPKHWEPFRNVVSGRIINGYCRGDWLLSFVYR 468

[Close]

BLAST of FE668953 vs. SwissProt
Match: TMCO4_RAT (Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.229e-13
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            IG+SLGARVI+ CL+ +A+ ++   ++E VVLLGAP+    + W+  R +V+GR IN Y R DW+L   +R
Sbjct:  398 IGFSLGARVIYFCLQEMAQEQDCQGIIEDVVLLGAPVEGDPKYWEPFRNVVSGRIINGYCRGDWLLSFVYR 468

[Close]

BLAST of FE668953 vs. SwissProt
Match: TMCO4_CAEEL (Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans GN=F35D11.3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.084e-12
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            IG+SLGARVIF CL  +++      ++E V+LLGAP+    + W     +V+GR IN Y  TDW+L   +R
Sbjct:  431 IGFSLGARVIFHCLLTMSKRSESVGIIEDVILLGAPVTASPKEWSKVCTVVSGRVINGYCETDWLLRFLYR 501

[Close]

BLAST of FE668953 vs. SwissProt
Match: YFD4_YEAST (Uncharacterized membrane protein YFL034W OS=Saccharomyces cerevisiae GN=YFL034W PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.897e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+S+GARVIF CL  L + +    L+E V L G P  +K E    AR +V+GRF+N YS  DW L   FR
Sbjct:  756 VGFSIGARVIFSCLIELCK-KKALGLIENVYLFGTPAVMKKEQLVMARSVVSGRFVNGYSDKDWFLAYLFR 825

[Close]

BLAST of FE668953 vs. SwissProt
Match: YK68_SCHPO (Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe GN=SPAC607.08c PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.241e-10
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            IG+SLGAR I +CL  LA+      LVE V+++GAP+    + W   R +VAGRF+N YS +D++L + +R
Sbjct:  394 IGFSLGARTILECLLHLAD-RGETNLVENVIVMGAPMPTDAKLWLKMRCVVAGRFVNVYSASDYVLQLVYR 463

[Close]

BLAST of FE668953 vs. TrEMBL
Match: B9T6E0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0172970 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.392e-26
Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +GYSLGARVIFKCLE LAETE +AE+VERVVLLGAPI+IKNE W AARK+VAGRF+NAYS  DW+LGVAFR
Sbjct:  582 VGYSLGARVIFKCLETLAETERNAEVVERVVLLGAPISIKNEKWAAARKVVAGRFVNAYSTNDWILGVAFR 652

[Close]

BLAST of FE668953 vs. TrEMBL
Match: B9HFD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_563247 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.022e-26
Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +GYSLGARVIFKCLE LAETE+ AE+VERVVLLGAPI+IK++ W+AARKMVAGRF+NAYS  DW LGVAFR
Sbjct:  547 VGYSLGARVIFKCLETLAETEHSAEVVERVVLLGAPISIKDQKWEAARKMVAGRFVNAYSTGDWTLGVAFR 617

[Close]

BLAST of FE668953 vs. TrEMBL
Match: A5BFT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012480 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.010e-25
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            IGYSLGARVIFKCL+ LAETE +AELVERVVLLGAPI+ ++ENW+ ARKMVAGRF+NA+S  DW LGVAFR
Sbjct:  555 IGYSLGARVIFKCLQYLAETEQNAELVERVVLLGAPISFRDENWEVARKMVAGRFVNAFSTNDWTLGVAFR 625

[Close]

BLAST of FE668953 vs. TrEMBL
Match: D7SP33_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018828001 PE=4 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.625e-25
Identity = 55/71 (77.46%), Postives = 64/71 (90.14%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +GYSLGARVIFKCL+ LAETE +AELVERVVLLGAPI+ ++ENW+ ARKMVAGRF+NA+S  DW LGVAFR
Sbjct:  529 VGYSLGARVIFKCLQYLAETEQNAELVERVVLLGAPISFRDENWEVARKMVAGRFVNAFSTNDWTLGVAFR 599

[Close]

BLAST of FE668953 vs. TrEMBL
Match: Q9SL37_ARATH (Putative uncharacterized protein At2g18100 OS=Arabidopsis thaliana GN=At2g18100 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.428e-25
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARV+FKCL+ LAETE +AE+VERVVLLGAPI+IKNENW+  RKMVAGRFIN Y+  DW LGVAFR
Sbjct:  527 VGFSLGARVVFKCLQTLAETEKNAEIVERVVLLGAPISIKNENWRDVRKMVAGRFINVYATNDWTLGVAFR 597

[Close]

BLAST of FE668953 vs. TrEMBL
Match: Q84W08_ARATH (At2g18100 OS=Arabidopsis thaliana GN=At2g18100 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.428e-25
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARV+FKCL+ LAETE +AE+VERVVLLGAPI+IKNENW+  RKMVAGRFIN Y+  DW LGVAFR
Sbjct:  528 VGFSLGARVVFKCLQTLAETEKNAEIVERVVLLGAPISIKNENWRDVRKMVAGRFINVYATNDWTLGVAFR 598

[Close]

BLAST of FE668953 vs. TrEMBL
Match: D7MBN6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_912740 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.638e-25
Identity = 54/71 (76.06%), Postives = 62/71 (87.32%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARVIFKCL+ LAETE +AELVERVVLLGAPI+I NENW+  RKMVAGRFIN Y+  DW LG+AFR
Sbjct:  422 VGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINNENWRDVRKMVAGRFINVYATNDWTLGIAFR 492

[Close]

BLAST of FE668953 vs. TrEMBL
Match: D7LAF9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480715 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.975e-25
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARV+FKCL+ L ETE +AE+VERVVLLGAPI+IKNENW+  RKMVAGRFIN Y+  DW LGVAFR
Sbjct:  539 VGFSLGARVVFKCLQTLVETEKNAEIVERVVLLGAPISIKNENWRDVRKMVAGRFINVYATNDWTLGVAFR 609

[Close]

BLAST of FE668953 vs. TrEMBL
Match: Q3E9Q2_ARATH (Putative uncharacterized protein At4g36210.1 OS=Arabidopsis thaliana GN=At4g36210 PE=4 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.902e-24
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARVIFKCL+ LAETE +AELVERVVLLGAPI+I +ENW+  RKMVAGRFIN Y+  DW LG+AFR
Sbjct:  422 VGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGRFINVYATNDWTLGIAFR 492

[Close]

BLAST of FE668953 vs. TrEMBL
Match: B3H797_ARATH (Uncharacterized protein At4g36210.3 OS=Arabidopsis thaliana GN=At4g36210 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.902e-24
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARVIFKCL+ LAETE +AELVERVVLLGAPI+I +ENW+  RKMVAGRFIN Y+  DW LG+AFR
Sbjct:  544 VGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGRFINVYATNDWTLGIAFR 614

[Close]

BLAST of FE668953 vs. TAIR peptide
Match: AT2G18100.1 (| Symbols: | Protein of unknown function (DUF726) | chr2:7867929-7871337 FORWARD LENGTH=656)

HSP 1 Score: 117.857 bits (294), Expect = 1.335e-27
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARV+FKCL+ LAETE +AE+VERVVLLGAPI+IKNENW+  RKMVAGRFIN Y+  DW LGVAFR
Sbjct:  528 VGFSLGARVVFKCLQTLAETEKNAEIVERVVLLGAPISIKNENWRDVRKMVAGRFINVYATNDWTLGVAFR 598

[Close]

BLAST of FE668953 vs. TAIR peptide
Match: AT4G36210.3 (| Symbols: | Protein of unknown function (DUF726) | chr4:17130354-17134302 FORWARD LENGTH=672)

HSP 1 Score: 114.775 bits (286), Expect = 1.130e-26
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARVIFKCL+ LAETE +AELVERVVLLGAPI+I +ENW+  RKMVAGRFIN Y+  DW LG+AFR
Sbjct:  544 VGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGRFINVYATNDWTLGIAFR 614

[Close]

BLAST of FE668953 vs. TAIR peptide
Match: AT4G36210.1 (| Symbols: | Protein of unknown function (DUF726) | chr4:17130951-17134302 FORWARD LENGTH=550)

HSP 1 Score: 114.775 bits (286), Expect = 1.130e-26
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2

Query:   47 IGYSLGARVIFKCLEVLAETENHAELVERVVLLGAPIAIKNENWKAARKMVAGRFINAYSRTDWMLGVAFR 259
            +G+SLGARVIFKCL+ LAETE +AELVERVVLLGAPI+I +ENW+  RKMVAGRFIN Y+  DW LG+AFR
Sbjct:  422 VGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGRFINVYATNDWTLGIAFR 492

The following BLAST results are available for this feature:

BLAST of FE668953 vs. SwissProt
BLAST of FE668953 vs. TrEMBL
BLAST of FE668953 vs. TAIR peptide

BLAST of FE668953 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
TMCO4_HUMAN	9.721e-14	46.48	Transmembrane and coiled-coil domain-containing pr...	[more]
YELD_SCHPO	2.828e-13	46.48	Uncharacterized membrane protein C6F6.13c OS=Schiz...	[more]
TMCO4_MOUSE	3.694e-13	46.48	Transmembrane and coiled-coil domain-containing pr...	[more]
TMCO4_RAT	8.229e-13	46.48	Transmembrane and coiled-coil domain-containing pr...	[more]
TMCO4_CAEEL	4.084e-12	43.66	Uncharacterized membrane protein F35D11.3 OS=Caeno...	[more]
YFD4_YEAST	5.897e-11	46.48	Uncharacterized membrane protein YFL034W OS=Saccha...	[more]
YK68_SCHPO	2.241e-10	45.07	Uncharacterized membrane protein C6F6.13c OS=Schiz...	[more]

BLAST of FE668953 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9T6E0_RICCO	1.392e-26	81.69	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9HFD3_POPTR	9.022e-26	80.28	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BFT8_VITVI	2.010e-25	78.87	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7SP33_VITVI	2.625e-25	77.46	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q9SL37_ARATH	3.428e-25	76.06	Putative uncharacterized protein At2g18100 OS=Arab...	[more]
Q84W08_ARATH	3.428e-25	76.06	At2g18100 OS=Arabidopsis thaliana GN=At2g18100 PE=...	[more]
D7MBN6_ARALY	7.638e-25	76.06	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7LAF9_ARALY	9.975e-25	74.65	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q3E9Q2_ARATH	2.902e-24	74.65	Putative uncharacterized protein At4g36210.1 OS=Ar...	[more]
B3H797_ARATH	2.902e-24	74.65	Uncharacterized protein At4g36210.3 OS=Arabidopsis...	[more]

BLAST of FE668953 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G18100.1	1.335e-27	76.06	\| Symbols: \| Protein of unknown function (DUF726)...	[more]
AT4G36210.3	1.130e-26	74.65	\| Symbols: \| Protein of unknown function (DUF726)...	[more]
AT4G36210.1	1.130e-26	74.65	\| Symbols: \| Protein of unknown function (DUF726)...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007941	Protein of unknown function DUF726	PANTHER	PTHR17920	UNCHARACTERIZED	coord: 8..78 score: 6.2
IPR007941	Protein of unknown function DUF726	PFAM	PF05277	DUF726	coord: 8..78 score: 9.3
None	No IPR available	GENE3D	3.40.50.1820	no description	coord: 8..44 score: 0.0

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE668953 ID=FE668953; Name=FE668953; organism=Cicer arietinum; type=EST; length=261bp
CAGGAATTCGAATTCCAATTCGTAATTATGGGAGGGTTGCAGGGAAATAG
GTTACTCGCTTGGAGCACGAGTTATTTTCAAGTGTCTAGAGGTTTTAGCT
GAAACAGAAAACCATGCTGAACTTGTTGAAAGAGTTGTCCTTCTTGGAGC
ACCCATTGCAATCAAGAATGAGAATTGGAAAGCTGCTAGAAAGATGGTAG
CAGGAAGGTTTATAAATGCTTATTCAAGGACCGACTGGATGCTTGGAGTT
GCTTTCCGTGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007941	DUF726

Search form