FE669947

EST Overview


Name	FE669947
Unique Name	FE669947
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	393

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of FE669947 vs. SwissProt
Match: SDN1_ARATH (Small RNA degrading nuclease 1 OS=Arabidopsis thaliana GN=SDN1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.873e-26
Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 3

Query:   24 LIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALHE 392
            L  G ILVGHSL  DL VLKID+ +VIDTA +FK  +    RRPSLN+LC+S+LGYEVR+   PHDC+ DASA MKL LA ++  VD         +++ + E  KL LH+IP  V  E L +
Sbjct:  214 LSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIK---PSKEMLEVEKAKLFLHKIPNNVPSEELEQ 333

[Close]

BLAST of FE669947 vs. SwissProt
Match: SDN3_ARATH (Small RNA degrading nuclease 3 OS=Arabidopsis thaliana GN=SDN3 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.312e-26
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHG---VDKPFPLTWV-----QEQVSKSEMTKLLLHRIPTTVNKEALH 389
            Q  LR+ +  G ILVGH L+NDL+VL+ID+ RVIDT+Y+F+ VD    +RPSLN+LC+SVLG EVR   A H+C+ DA+A MKLVLA ++ G   + +P     V     QE   ++   +L LH+IP  V  E LH
Sbjct:  212 QKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKGAATLIQPTEEMMVAEKRRQEARQEAGKAQLFLHKIPHDVPSEELH 348

[Close]

BLAST of FE669947 vs. SwissProt
Match: SDN2_ARATH (Small RNA degrading nuclease 2 OS=Arabidopsis thaliana GN=SDN2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.016e-23
Identity = 59/125 (47.20%), Postives = 86/125 (68.80%), Query Frame = 3

Query:   30 DGNILVGHSLYNDLRVLKIDYVRVIDTAYIFK-PVDGSIH----RRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALH 389
            +  ILVG SL +DL+VLK+D+ RVIDT+ +FK   DG+      +RPSLN LC+ +LGYEV+++  PH+C+ DA A MKLVLA + +G +   PL+   +++ ++E +KL LHRIP  V  E L+
Sbjct:  218 EDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLS---KEMLEAEKSKLYLHRIPCNVPYEELN 339

[Close]

BLAST of FE669947 vs. SwissProt
Match: SDN4_ARATH (Putative small RNA degrading nuclease 4 OS=Arabidopsis thaliana GN=SDN4 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.203e-16
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 3

Query:   84 IDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEAL 386
            ID+  VIDT+ +FK  +    RRPSLN+LC SVLGYEV++    H C+ DA+A MKL LA IK  VD    LT       ++E ++L LHRIP  ++ E L
Sbjct:  156 IDHPIVIDTSLVFKYPNSRKLRRPSLNTLCMSVLGYEVQKAGVSHHCVHDAAAAMKLALAVIKKRVDTTITLT------KEAEKSRLFLHRIPHHLSSEEL 250

[Close]

BLAST of FE669947 vs. SwissProt
Match: SDN5_ARATH (Small RNA degrading nuclease 5 OS=Arabidopsis thaliana GN=SDN5 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.522e-11
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 3

Query:   15 LRKLIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVD 284
            L+ +    ILVGHSL NDL  LKI +  VIDTA ++K   G  + +  L  L +  L  E+++ ++ HD  +DA A M L L +IKHG D
Sbjct:  285 LKLVFKETILVGHSLENDLLSLKISHNLVIDTAVLYKHPHGRSY-KTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKHGPD 373

[Close]

BLAST of FE669947 vs. SwissProt
Match: REXO1_YEAST (RNA exonuclease 1 OS=Saccharomyces cerevisiae GN=RNH70 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.582e-8
Identity = 34/93 (36.56%), Postives = 56/93 (60.22%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGV 281
            Q  L K+I   +IL+GHSL NDL+V+K+ +  V+DTA I+    G    +PSL  L ++ L   +  ++  HD ++DA A ++L   +I +G+
Sbjct:  292 QKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPF-KPSLKYLSETFLNKSI--QNGEHDSVEDARACLELTKLKILNGL 381

[Close]

BLAST of FE669947 vs. SwissProt
Match: REXO4_HUMAN (RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 5.985e-8
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 3

Query:    6 QNSLRKLIDGNILVGHSLYNDLRVLKIDY-VRVIDTAYIFKPVDGSIHR-RPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKL 254
            Q  + +++ G ILVGH+L+NDL+VL +D+  + I     +KP    +   RPSL  L + +LG +V+Q  A H  + DA A M+L
Sbjct:  311 QKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ--AEHCSIQDAQAAMRL 393

[Close]

BLAST of FE669947 vs. SwissProt
Match: YFE9_SCHPO (Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe GN=SPAC637.09 PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.021e-7
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 3

Query:    6 QNSLRKLIDGN-ILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDA-PHDCLDDASATMKLVLARIKHG 278
            Q+ L+K +D N +L+GHSL +DL  LK  +  +IDTA I+    G    +PSL  L    L  E+++  A  HD  +DA A + L+  ++K+G
Sbjct:  334 QSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHIIDTANIYNHTRGP-PSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKVKNG 425

[Close]

BLAST of FE669947 vs. SwissProt
Match: REXO4_USTMA (RNA exonuclease 4 OS=Ustilago maydis GN=REX4 PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.333e-7
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 3

Query:    6 QNSLRKLIDGNILVGHSLYNDLRVLKIDYVRVI--DTAYIFKPV-DGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATM 248
            Q  +  LI G +LVGH++ NDL+ L + + +V+  DTA  F+P+ D +  + PSL  L + VLG +++ +   H  ++DA ATM
Sbjct:  203 QGEVANLIKGKVLVGHAIQNDLKALLLSHPKVLIRDTA-TFQPLRDLAKTKYPSLKKLAKLVLGIDIQLEGESHSSVEDARATM 285

[Close]

BLAST of FE669947 vs. SwissProt
Match: REXO4_MOUSE (RNA exonuclease 4 OS=Mus musculus GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 1.741e-7
Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 3

Query:    6 QNSLRKLIDGNILVGHSLYNDLRVLKIDY-VRVIDTAYIFKPVDGSIHR-RPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKL 254
            +  + +++ G ILVGH+L+NDL+VL +D+  + I     FKP    +   RPSL  L + +LG  V+Q  A H  + DA A M+L
Sbjct:  321 KKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRVKSGRPSLKRLSEKILGIRVQQ--AEHCSIQDAQAAMRL 403

[Close]

BLAST of FE669947 vs. TrEMBL
Match: D7TTF3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_129.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000228001 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.745e-37
Identity = 80/129 (62.02%), Postives = 104/129 (80.62%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALH 389
            Q S++KL+  G +LVGHSL+NDL+ LK+D+ RVIDTA+I+K  +  I+RRPSLN+LC+S+LGYEVRQKDAPH+CLDDASA MKLVLA+++ G+D   P  +V E V ++EM KLLLHRIPT V  E L+
Sbjct:  211 QRSMKKLLSHGAVLVGHSLHNDLKALKLDHARVIDTAFIYKYENQPINRRPSLNNLCKSILGYEVRQKDAPHNCLDDASAAMKLVLAKLEQGLDDAIP--FVHEDVPENEMAKLLLHRIPTDVPIEELN 337

[Close]

BLAST of FE669947 vs. TrEMBL
Match: B9SFZ8_RICCO (Exonuclease, putative OS=Ricinus communis GN=RCOM_1153050 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.918e-32
Identity = 71/129 (55.04%), Postives = 97/129 (75.19%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALH 389
            Q  ++KL+  G ILVGH LYNDL+ LK+D+ RV+DT++IF+ +DG   R PSL++LC+SVLG+E+R+  APH+C+DDASA MKL LA+I+ GVD   P+    E V ++E+ KLLLH IPT V+ E LH
Sbjct:  211 QKFMKKLLQKGTILVGHGLYNDLQALKLDHARVVDTSFIFRRLDG---RPPSLDTLCKSVLGFELRKGGAPHNCMDDASAAMKLFLAKIERGVDNDIPVN--HEHVLENELAKLLLHGIPTDVHSEELH 334

[Close]

BLAST of FE669947 vs. TrEMBL
Match: Q7XMP8_ORYSJ (OSJNBb0059K02.13 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0059K02.13 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.637e-27
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIP 362
            Q SL+KL+  G IL+GHSL  DL  LK DY RVIDTAYIFK  +       SLNSLC+SVLGY VR++  PH+CL DA A M LVLA++KHG + P  +   ++ V +S+M KLL H+IP
Sbjct:  210 QKSLKKLLSKGKILIGHSLSKDLHALKFDYSRVIDTAYIFKYANLPTTASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLKHGFNDPIEI--ARDSVPESDMMKLLAHKIP 327

[Close]

BLAST of FE669947 vs. TrEMBL
Match: Q25AL7_ORYSA (H0212B02.12 protein OS=Oryza sativa GN=H0212B02.12 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.637e-27
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIP 362
            Q SL+KL+  G IL+GHSL  DL  LK DY RVIDTAYIFK  +       SLNSLC+SVLGY VR++  PH+CL DA A M LVLA++KHG + P  +   ++ V +S+M KLL H+IP
Sbjct:  210 QKSLKKLLSKGKILIGHSLSKDLHALKFDYSRVIDTAYIFKYANLPTTASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLKHGFNDPIEI--ARDSVPESDMMKLLAHKIP 327

[Close]

BLAST of FE669947 vs. TrEMBL
Match: Q0J9I1_ORYSJ (Os04g0650600 protein OS=Oryza sativa subsp. japonica GN=Os04g0650600 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.637e-27
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIP 362
            Q SL+KL+  G IL+GHSL  DL  LK DY RVIDTAYIFK  +       SLNSLC+SVLGY VR++  PH+CL DA A M LVLA++KHG + P  +   ++ V +S+M KLL H+IP
Sbjct:  209 QKSLKKLLSKGKILIGHSLSKDLHALKFDYSRVIDTAYIFKYANLPTTASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLKHGFNDPIEI--ARDSVPESDMMKLLAHKIP 326

[Close]

BLAST of FE669947 vs. TrEMBL
Match: B8AVK7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17699 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.637e-27
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIP 362
            Q SL+KL+  G IL+GHSL  DL  LK DY RVIDTAYIFK  +       SLNSLC+SVLGY VR++  PH+CL DA A M LVLA++KHG + P  +   ++ V +S+M KLL H+IP
Sbjct:  209 QKSLKKLLSKGKILIGHSLSKDLHALKFDYSRVIDTAYIFKYANLPTTASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLKHGFNDPIEI--ARDSVPESDMMKLLAHKIP 326

[Close]

BLAST of FE669947 vs. TrEMBL
Match: C5Y952_SORBI (Putative uncharacterized protein Sb06g030900 OS=Sorghum bicolor GN=Sb06g030900 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.647e-27
Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIP 362
            Q SL++++  GNIL+GHSL+ DL VLK+DY +VIDTAYIFK  +      PSLNSLC+++LGY VR++  PH+CL DA A M LVLA++K+G + P  +      V +S++ KLL HRIP
Sbjct:  317 QKSLKRMLSKGNILIGHSLHRDLCVLKLDYSQVIDTAYIFKYANLPTTASPSLNSLCKAILGYSVREEGEPHNCLKDAEAAMNLVLAKLKNGFNDPIEI--AASSVIESDVVKLLAHRIP 434

[Close]

BLAST of FE669947 vs. TrEMBL
Match: C0J1J0_ARATH (Small RNA-degrading nuclease 1 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.932e-25
Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 3

Query:   24 LIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALHE 392
            L  G ILVGHSL  DL VLKID+ +VIDTA +FK  +    RRPSLN+LC+S+LGYEVR+   PHDC+ DASA MKL LA ++  VD         +++ + E  KL LH+IP  V  E L +
Sbjct:  214 LSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIK---PSKEMLEVEKAKLFLHKIPNNVPSEELEQ 333

[Close]

BLAST of FE669947 vs. TrEMBL
Match: D7MKR8_ARALY (Exonuclease OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919985 PE=4 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.408e-24
Identity = 62/136 (45.59%), Postives = 89/136 (65.44%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWV--------QEQVSKSEMTKLLLHRIPTTVNKEAL 386
            Q  LR+ +  G ILVGH L+NDL+VL+ID+ RVIDT+++F+  +     RPSLN+LC++VLG E+R  DA H+C+ DA+A+MKLVLA ++ GVD     +          QE+  ++  T+L LH+IP  V  E L
Sbjct:  212 QKKLRRFLSQGTILVGHGLHNDLKVLRIDHARVIDTSFVFEFENAPKTHRPSLNNLCKAVLGQELRMPDAAHNCVHDAAASMKLVLAVVEKGVDTTIQKSEEMLVAEKKRQEERQEAGKTQLFLHKIPHYVPSEEL 347

[Close]

BLAST of FE669947 vs. TrEMBL
Match: D7LT27_ARALY (At3g50100 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_323586 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.195e-23
Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 3

Query:   24 LIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALHE 392
            L  G ILVGHSL  DL VLKID+ +VIDTA +F+  +    RRPSLN+LC+S+LGYEVR+   PH+C+ DA A MKL LA ++  VD         +++ + E  KL LH+IP  V  E L +
Sbjct:  214 LSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFRYSNTRKLRRPSLNNLCKSILGYEVRKTGVPHNCVHDAEAAMKLALAVVEKRVDTTIK---PSKEMLEVEKAKLFLHKIPNNVPSEELDQ 333

[Close]

BLAST of FE669947 vs. TAIR peptide
Match: AT3G50100.1 (| Symbols: SDN1 | small RNA degrading nuclease 1 | chr3:18578411-18580594 FORWARD LENGTH=409)

HSP 1 Score: 116.316 bits (290), Expect = 4.992e-27
Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 3

Query:   24 LIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALHE 392
            L  G ILVGHSL  DL VLKID+ +VIDTA +FK  +    RRPSLN+LC+S+LGYEVR+   PHDC+ DASA MKL LA ++  VD         +++ + E  KL LH+IP  V  E L +
Sbjct:  214 LSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIK---PSKEMLEVEKAKLFLHKIPNNVPSEELEQ 333

[Close]

BLAST of FE669947 vs. TAIR peptide
Match: AT5G67240.1 (| Symbols: SDN3 | small RNA degrading nuclease 3 | chr5:26824454-26828098 REVERSE LENGTH=782)

HSP 1 Score: 115.546 bits (288), Expect = 8.515e-27
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHG---VDKPFPLTWV-----QEQVSKSEMTKLLLHRIPTTVNKEALH 389
            Q  LR+ +  G ILVGH L+NDL+VL+ID+ RVIDT+Y+F+ VD    +RPSLN+LC+SVLG EVR   A H+C+ DA+A MKLVLA ++ G   + +P     V     QE   ++   +L LH+IP  V  E LH
Sbjct:  212 QKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKGAATLIQPTEEMMVAEKRRQEARQEAGKAQLFLHKIPHDVPSEELH 348

[Close]

BLAST of FE669947 vs. TAIR peptide
Match: AT5G05540.2 (| Symbols: SDN2 | small RNA degrading nuclease 2 | chr5:1636419-1638256 FORWARD LENGTH=352)

HSP 1 Score: 108.612 bits (270), Expect = 1.041e-24
Identity = 59/125 (47.20%), Postives = 86/125 (68.80%), Query Frame = 3

Query:   30 DGNILVGHSLYNDLRVLKIDYVRVIDTAYIFK-PVDGSIH----RRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALH 389
            +  ILVG SL +DL+VLK+D+ RVIDT+ +FK   DG+      +RPSLN LC+ +LGYEV+++  PH+C+ DA A MKLVLA + +G +   PL+   +++ ++E +KL LHRIP  V  E L+
Sbjct:  218 EDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLS---KEMLEAEKSKLYLHRIPCNVPYEELN 339

[Close]

BLAST of FE669947 vs. TAIR peptide
Match: AT5G05540.1 (| Symbols: SDN2 | small RNA degrading nuclease 2 | chr5:1636419-1638759 FORWARD LENGTH=466)

HSP 1 Score: 108.612 bits (270), Expect = 1.041e-24
Identity = 59/125 (47.20%), Postives = 86/125 (68.80%), Query Frame = 3

Query:   30 DGNILVGHSLYNDLRVLKIDYVRVIDTAYIFK-PVDGSIH----RRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEALH 389
            +  ILVG SL +DL+VLK+D+ RVIDT+ +FK   DG+      +RPSLN LC+ +LGYEV+++  PH+C+ DA A MKLVLA + +G +   PL+   +++ ++E +KL LHRIP  V  E L+
Sbjct:  218 EDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLS---KEMLEAEKSKLYLHRIPCNVPYEELN 339

[Close]

BLAST of FE669947 vs. TAIR peptide
Match: AT3G50090.1 (| Symbols: | Exonuclease family protein | chr3:18575432-18577336 FORWARD LENGTH=322)

HSP 1 Score: 85.1149 bits (209), Expect = 1.232e-17
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 3

Query:   84 IDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTWVQEQVSKSEMTKLLLHRIPTTVNKEAL 386
            ID+  VIDT+ +FK  +    RRPSLN+LC SVLGYEV++    H C+ DA+A MKL LA IK  VD    LT       ++E ++L LHRIP  ++ E L
Sbjct:  156 IDHPIVIDTSLVFKYPNSRKLRRPSLNTLCMSVLGYEVQKAGVSHHCVHDAAAAMKLALAVIKKRVDTTITLT------KEAEKSRLFLHRIPHHLSSEEL 250

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BLAST of FE669947 vs. TAIR peptide
Match: AT5G67240.2 (| Symbols: SDN3 | small RNA degrading nuclease 3 | chr5:26824454-26828098 REVERSE LENGTH=762)

HSP 1 Score: 83.5741 bits (205), Expect = 3.586e-17
Identity = 56/137 (40.88%), Postives = 74/137 (54.01%), Query Frame = 3

Query:    6 QNSLRKLID-GNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHG---VDKPFPLTWV-----QEQVSKSEMTKLLLHRIPTTVNKEALH 389
            Q  LR+ +  G ILVGH L+NDL+VL+ID+ RVIDT+Y                    SVLG EVR   A H+C+ DA+A MKLVLA ++ G   + +P     V     QE   ++   +L LH+IP  V  E LH
Sbjct:  212 QKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSY--------------------SVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKGAATLIQPTEEMMVAEKRRQEARQEAGKAQLFLHKIPHDVPSEELH 328

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BLAST of FE669947 vs. TAIR peptide
Match: AT5G25800.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:8979761-8982724 REVERSE LENGTH=567)

HSP 1 Score: 68.1662 bits (165), Expect = 1.559e-12
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 3

Query:   15 LRKLIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQSVLGYEVRQKDAPHDCLDDASATMKLVLARIKHGVD 284
            L+ +    ILVGHSL NDL  LKI +  VIDTA ++K   G  + +  L  L +  L  E+++ ++ HD  +DA A M L L +IKHG D
Sbjct:  285 LKLVFKETILVGHSLENDLLSLKISHNLVIDTAVLYKHPHGRSY-KTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKHGPD 373

The following BLAST results are available for this feature:

BLAST of FE669947 vs. SwissProt
BLAST of FE669947 vs. TrEMBL
BLAST of FE669947 vs. TAIR peptide

BLAST of FE669947 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SDN1_ARATH	4.873e-26	51.22	Small RNA degrading nuclease 1 OS=Arabidopsis thal...	[more]
SDN3_ARATH	8.312e-26	48.18	Small RNA degrading nuclease 3 OS=Arabidopsis thal...	[more]
SDN2_ARATH	1.016e-23	47.20	Small RNA degrading nuclease 2 OS=Arabidopsis thal...	[more]
SDN4_ARATH	1.203e-16	47.52	Putative small RNA degrading nuclease 4 OS=Arabido...	[more]
SDN5_ARATH	1.522e-11	42.22	Small RNA degrading nuclease 5 OS=Arabidopsis thal...	[more]
REXO1_YEAST	4.582e-8	36.56	RNA exonuclease 1 OS=Saccharomyces cerevisiae GN=R...	[more]
REXO4_HUMAN	5.985e-8	38.82	RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV...	[more]
YFE9_SCHPO	1.021e-7	37.63	Uncharacterized exonuclease C637.09 OS=Schizosacch...	[more]
REXO4_USTMA	1.333e-7	38.10	RNA exonuclease 4 OS=Ustilago maydis GN=REX4 PE=3 ...	[more]
REXO4_MOUSE	1.741e-7	38.82	RNA exonuclease 4 OS=Mus musculus GN=Rexo4 PE=2 SV...	[more]

BLAST of FE669947 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7TTF3_VITVI	1.745e-37	62.02	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SFZ8_RICCO	4.918e-32	55.04	Exonuclease, putative OS=Ricinus communis GN=RCOM_...	[more]
Q7XMP8_ORYSJ	1.637e-27	55.00	OSJNBb0059K02.13 protein OS=Oryza sativa subsp. ja...	[more]
Q25AL7_ORYSA	1.637e-27	55.00	H0212B02.12 protein OS=Oryza sativa GN=H0212B02.12...	[more]
Q0J9I1_ORYSJ	1.637e-27	55.00	Os04g0650600 protein OS=Oryza sativa subsp. japoni...	[more]
B8AVK7_ORYSI	1.637e-27	55.00	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5Y952_SORBI	3.647e-27	52.50	Putative uncharacterized protein Sb06g030900 OS=So...	[more]
C0J1J0_ARATH	9.932e-25	51.22	Small RNA-degrading nuclease 1 OS=Arabidopsis thal...	[more]
D7MKR8_ARALY	8.408e-24	45.59	Exonuclease OS=Arabidopsis lyrata subsp. lyrata GN...	[more]
D7LT27_ARALY	3.195e-23	48.78	At3g50100 OS=Arabidopsis lyrata subsp. lyrata GN=A...	[more]

BLAST of FE669947 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT3G50100.1	4.992e-27	51.22	\| Symbols: SDN1 \| small RNA degrading nuclease 1 \|...	[more]
AT5G67240.1	8.515e-27	48.18	\| Symbols: SDN3 \| small RNA degrading nuclease 3 \|...	[more]
AT5G05540.2	1.041e-24	47.20	\| Symbols: SDN2 \| small RNA degrading nuclease 2 \|...	[more]
AT5G05540.1	1.041e-24	47.20	\| Symbols: SDN2 \| small RNA degrading nuclease 2 \|...	[more]
AT3G50090.1	1.232e-17	47.52	\| Symbols: \| Exonuclease family protein \| chr3:18...	[more]
AT5G67240.2	3.586e-17	40.88	\| Symbols: SDN3 \| small RNA degrading nuclease 3 \|...	[more]
AT5G25800.1	1.559e-12	42.22	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..103 score: 4.9
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	Exonuc_X-T	coord: 4..84 score: 2
None	No IPR available	GENE3D	3.30.420.10	no description	coord: 4..90 score: 2.1
None	No IPR available	PANTHER	PTHR12801	EXONUCLEASE	coord: 2..129 score: 4
None	No IPR available	PANTHER	PTHR12801:SF9	EXONUCLEASE-RELATED	coord: 2..129 score: 4

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE669947 ID=FE669947; Name=FE669947; organism=Cicer arietinum; type=EST; length=393bp
CATTCCAGAATTCACTGAGGAAGTTAATCGATGGAAACATATTAGTGGGA
CACAGTTTATATAATGATCTCCGTGTGCTGAAGATAGATTATGTTAGAGT
AATTGACACCGCATATATCTTCAAACCCGTGGATGGATCTATTCACAGGA
GACCGTCTTTGAATAGTTTATGTCAGTCTGTGTTGGGATATGAAGTTCGG
CAAAAGGATGCTCCACATGATTGTCTAGATGATGCAAGTGCAACAATGAA
ACTTGTTCTTGCAAGGATCAAACACGGCGTTGATAAGCCATTTCCATTGA
CGTGGGTTCAAGAGCAAGTTTCAAAGAGTGAGATGACGAAGCTGCTTCTT
CACAGAATACCAACTACTGTGAACAAGGAAGCACTACATGAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

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