GR393606

EST Overview


Name	GR393606
Unique Name	GR393606
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	519

Libraries


Library Name	Type
LIBEST_024778 ICC1882 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.511e-51
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.822e-51
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.822e-51
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.022e-50
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER RKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica GN=Os08g0117300 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.381e-47
Identity = 94/103 (91.26%), Postives = 97/103 (94.17%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGV+ RD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct:   49 QIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS131_ORYSJ (40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica GN=Os08g0117200 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 1.381e-47
Identity = 94/103 (91.26%), Postives = 97/103 (94.17%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGV+ RD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct:   49 QIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS13_MAIZE (40S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.803e-47
Identity = 94/103 (91.26%), Postives = 97/103 (94.17%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGV+ RD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct:   49 QIGVLLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS13_WUCBA (40S ribosomal protein S13 OS=Wuchereria bancrofti GN=RPS13 PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 4.596e-43
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHG+AQV+ VTG+KI+RILKA G+APEIPEDLYHLIKKAV+IRKHLERNRKDKDSK+RLILVESRIHRLARYYK  ++LP  WKYES+TAS LV+
Sbjct:   49 QIGVILRDSHGVAQVRRVTGNKIVRILKAKGMAPEIPEDLYHLIKKAVNIRKHLERNRKDKDSKYRLILVESRIHRLARYYKTKRQLPATWKYESSTASALVS 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS13_BRUPA (40S ribosomal protein S13 OS=Brugia pahangi GN=RPS13 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 4.596e-43
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHG+AQV+ VTG+KI+RILKA G+APEIPEDLYHLIKKAV+IRKHLERNRKDKDSK+RLILVESRIHRLARYYK  ++LP  WKYES+TAS LV+
Sbjct:   49 QIGVILRDSHGVAQVRRVTGNKIVRILKAKGMAPEIPEDLYHLIKKAVNIRKHLERNRKDKDSKYRLILVESRIHRLARYYKTKRQLPATWKYESSTASALVS 151

[Close]

BLAST of GR393606 vs. SwissProt
Match: RS13_XENLA (40S ribosomal protein S13 OS=Xenopus laevis GN=rps13 PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 6.003e-43
Identity = 83/103 (80.58%), Postives = 95/103 (92.23%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK  + LPP WKYES+TAS LVA
Sbjct:   49 QIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTRRVLPPNWKYESSTASALVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: Q9MAV9_PANGI (Cytoplasmic ribosomal protein S13 OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.650e-50
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: Q3SC82_SOLLC (Cytoplasmic ribosomal protein S13 OS=Solanum lycopersicum GN=ACI39 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.650e-50
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: Q2V995_SOLTU (Cytoplasmic ribosomal protein S13-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.650e-50
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: B9RDA6_RICCO (40S ribosomal protein S13, putative OS=Ricinus communis GN=RCOM_1611610 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.650e-50
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: C6T9Q3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.521e-50
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: B6CBQ9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.521e-50
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: B7FGJ7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.904e-50
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVK+VTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: A5B3K9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028568 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.904e-50
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: D7M5S8_ARALY (ATRPS13A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490559 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.007e-49
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TrEMBL
Match: D7LRU2_ARALY (40S ribosomal protein S13 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907607 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.007e-49
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TAIR peptide
Match: AT4G00100.1 (| Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosomal protein S13A | chr4:37172-38123 FORWARD LENGTH=151)

HSP 1 Score: 199.519 bits (506), Expect = 8.639e-52
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of GR393606 vs. TAIR peptide
Match: AT3G60770.1 (| Symbols: | Ribosomal protein S13/S15 | chr3:22460525-22461656 REVERSE LENGTH=151)

HSP 1 Score: 199.519 bits (506), Expect = 8.639e-52
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = -1

Query:  211 QIGVIFRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 519
            QIGVI RDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:   49 QIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

The following BLAST results are available for this feature:

BLAST of GR393606 vs. SwissProt
BLAST of GR393606 vs. TrEMBL
BLAST of GR393606 vs. TAIR peptide

BLAST of GR393606 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS13_SOYBN	3.511e-51	98.06	40S ribosomal protein S13 OS=Glycine max GN=RPS13 ...	[more]
RS132_ARATH	7.822e-51	97.09	40S ribosomal protein S13-2 OS=Arabidopsis thalian...	[more]
RS131_ARATH	7.822e-51	97.09	40S ribosomal protein S13-1 OS=Arabidopsis thalian...	[more]
RS13_PEA	1.022e-50	98.06	40S ribosomal protein S13 OS=Pisum sativum GN=RPS1...	[more]
RS132_ORYSJ	1.381e-47	91.26	40S ribosomal protein S13-2 OS=Oryza sativa subsp....	[more]
RS131_ORYSJ	1.381e-47	91.26	40S ribosomal protein S13-1 OS=Oryza sativa subsp....	[more]
RS13_MAIZE	1.803e-47	91.26	40S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=...	[more]
RS13_WUCBA	4.596e-43	81.55	40S ribosomal protein S13 OS=Wuchereria bancrofti ...	[more]
RS13_BRUPA	4.596e-43	81.55	40S ribosomal protein S13 OS=Brugia pahangi GN=RPS...	[more]
RS13_XENLA	6.003e-43	80.58	40S ribosomal protein S13 OS=Xenopus laevis GN=rps...	[more]

BLAST of GR393606 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9MAV9_PANGI	2.650e-50	98.06	Cytoplasmic ribosomal protein S13 OS=Panax ginseng...	[more]
Q3SC82_SOLLC	2.650e-50	98.06	Cytoplasmic ribosomal protein S13 OS=Solanum lycop...	[more]
Q2V995_SOLTU	2.650e-50	98.06	Cytoplasmic ribosomal protein S13-like OS=Solanum ...	[more]
B9RDA6_RICCO	2.650e-50	98.06	40S ribosomal protein S13, putative OS=Ricinus com...	[more]
C6T9Q3_SOYBN	4.521e-50	98.06	Putative uncharacterized protein OS=Glycine max PE...	[more]
B6CBQ9_SOYBN	4.521e-50	98.06	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FGJ7_MEDTR	5.904e-50	97.09	Putative uncharacterized protein OS=Medicago trunc...	[more]
A5B3K9_VITVI	5.904e-50	97.09	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7M5S8_ARALY	1.007e-49	97.09	ATRPS13A OS=Arabidopsis lyrata subsp. lyrata GN=AR...	[more]
D7LRU2_ARALY	1.007e-49	97.09	40S ribosomal protein S13 OS=Arabidopsis lyrata su...	[more]

BLAST of GR393606 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G00100.1	8.639e-52	97.09	\| Symbols: ATRPS13A, RPS13, PFL2, RPS13A \| ribosom...	[more]
AT3G60770.1	8.639e-52	97.09	\| Symbols: \| Ribosomal protein S13/S15 \| chr3:224...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 18..100 score: 6.7
IPR000589	Ribosomal protein S15	PROSITE	PS00362	RIBOSOMAL_S15	coord: 50..80 score
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 17..94 score: 1.5
None	No IPR available	PANTHER	PTHR11885	RIBOSOMAL PROTEIN S15P/S13E	coord: 1..103 score: 1.7
None	No IPR available	PANTHER	PTHR11885:SF1	40S RIBOSOMAL PROTEIN S13	coord: 1..103 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR393606 ID=GR393606; Name=GR393606; organism=Cicer arietinum; type=EST; length=519bp
AAAATAACTAAACATTTTAATTATACTTAAAAACAATACACTGCCTCAAA
CGAAAATAATATCTTTCTGCTTAATCAAAGGTTCTTAACAAAAATAAAAA
TTGCATCGCTCACACGGCCTCCAAATGAACCTCAACATGACCCCACAGAT
TGCTGGTGCAGCAACCCTGTATAACCTGAAAGCCACCAGTATGAGCCGAT
ATAGTCTCTAAGCCACTAAAGTGCTGGCAGTTGTTGATTCATATTTCCAC
ACAGGGGGAAGCTTCTTAGTTTTCTTGTAATAGCGAGCCAGGCGATGGAT
TCTGCTCTCAACAAGGATGAGTCTGAACTTGGAGTCCTTGTCCTTCCTGT
TCCTTTCCAAATGCTTACGGATTGAAACCGCCTTCTTTATCAAATGGTAC
AAATCCTCAGGAATCTCAGGTGCAAGTCCATGAGCTTTGAGGATACGGAG
GATTTTGCTGCCGGTAACGCTCTTGACCTGAGCAATACCGTGAGAGTCAC
GGAAAATGACACCGATCTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000589	Ribosomal_uS15
IPR009068	uS15_NS1_RNA-bd_sf

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