GR394834

EST Overview
NameGR394834
Unique NameGR394834
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length649
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR394834 vs. TrEMBL
Match: Q9AVH2_PEA (Putative senescence-associated protein (Fragment) OS=Pisum sativum GN=ssa-13 PE=2 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 1.981e-7
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 1 
Query:   46 DSGLKALIHNPTKGTFPSLSFQLNAFTNYLNHRLPSYWGELLL 174
            DS L+A  HNPT G+F  L+FQ +A TN  N R  SY+ ELLL
Sbjct:   11 DSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLL 53

HSP 2 Score: 31.5722 bits (70), Expect = 1.981e-7
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 2 
Query:  212 GKINPPPDGPNPSHCPY*GAKNPTLGQIFLSTV 310
            GK N   DG  P+H PY    NPTLG+   + +
Sbjct:   60 GKTNLSHDGLIPAHVPYWWVNNPTLGEFCFTMI 92
The following BLAST results are available for this feature:
BLAST of GR394834 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q9AVH2_PEA1.981e-755.81Putative senescence-associated protein (Fragment) ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..17
score
NoneNo IPR availableSEGsegsegcoord: 18..30
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394834 ID=GR394834; Name=GR394834; organism=Cicer arietinum; type=EST; length=649bp
CCATGTTTGCCCAAAATAAAAGTCATCACCCCCTTTTTTAGAATGGATTC
CGGCTTAAAGGCGCTCATCCATAATCCTACAAAGGGCACCTTCCCATCAT
TATCTTTTCAACTAAATGCATTTACCAATTATCTGAACCACCGGCTCCCC
TCGTACTGGGGCGAATTACTTTTGCCATGACTAATCGAAAATTTTTTCTA
TTCTTCACAAGGGTAAAATAAACCCTCCTCCCGACGGTCCAAACCCAAGT
CACTGTCCCTATTAAGGGGCGAAGAATCCAACACTTGGTCAAATCTTTCT
TTCCACTGTTTTAAACAAACCCACCTCCAAGGTTCAATAGGCCACGCCTT
CCTATTGGTCCTTATGTCTGCACCCCAATTCGATTTCTCCCTGGGACTAA
TTTTTTCTGAAACCCTCTAACCTTTTTAAAACTTCCTATTCACGCATAAT
AGGAAACTAATAGAATACTACCTTTTCTATAGGTGTGTGTATTTTTTCAC
CCCAAAACCAAAACACTAAACCTGACCCCTTTTCCCCTCTTTCTGCCCCC
TATAGAGCAATATTCTCGGTCTCTCCATTGTATCCTAATCTCCTAGACAT
CACTGGATTTCCTCCTTTCTAAAAACACCGAGGCAGGCTCCCACACAAA
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