GR396766

EST Overview
NameGR396766
Unique NameGR396766
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length465
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR396766 vs. SwissProt
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.715e-16
Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = -3
Query:  221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 421
            PAK+V      KRPN  A+KTP+  KKAK ATPEKTDGKK  H ATPHP KKGGK+P   + KGQTP
Sbjct:  201 PAKKVD--QGKKRPNESAAKTPISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPN--STKGQTP 263          
BLAST of GR396766 vs. SwissProt
Match: HDT2_ARATH (Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 9.994e-11
Identity = 39/61 (63.93%), Postives = 42/61 (68.85%), Query Frame = -3
Query:  251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKK-GAHTATPHPMKKGGKSP 415
            K+   INK KRPN   SKTPV  KKAK A     TP+KT+ KK G HTATPHP KKGGKSP
Sbjct:  201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSP 260          
BLAST of GR396766 vs. SwissProt
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 7.162e-9
Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = -3
Query:  248 KRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSPK 388
            +R    A+KTPV  KKAK  TP+KTDGKK G H ATPHP K+  K+PK
Sbjct:  190 RRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTPK 237          
BLAST of GR396766 vs. TrEMBL
Match: C6TJ33_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.943e-16
Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = -3
Query:  221 KRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 388
            KRPN  ASKTPV +KKAKNATPEKTDGKKG HTATPHP KKGGK+P   A K +TP
Sbjct:  215 KRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPSSEA-KAKTP 269          
BLAST of GR396766 vs. TrEMBL
Match: C6TGQ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.844e-16
Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = -3
Query:  221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 421
            P K+V +    KRPN  ASKTPV +KKAKNATPEKTDGKKG HTATPHP KKGGK+P   A K +TP
Sbjct:  203 PPKKVDL--GKKRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPNREA-KAKTP 266          
BLAST of GR396766 vs. TrEMBL
Match: D7SN59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031404001 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.785e-13
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = -3
Query:  221 KRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSP-KGFAGKGQTP 388
            KRP   A+KTPVP KKAK  +P+KTDGKK GAHTATPHP KK GK+P  G  GKGQ+P
Sbjct:  264 KRPTESATKTPVPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSP 321          
BLAST of GR396766 vs. TrEMBL
Match: Q2PF09_TRIPR (Putative Nucleolar histone deacetylase OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.578e-12
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = -3
Query:  221 NKRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 391
            NKRPN  A +TPV  K+AKNATP KTD KK  H ATPHP KKGGK+P+  A K Q+P
Sbjct:  248 NKRPNEAAPQTPVSAKRAKNATPGKTDDKKAVHIATPHPNKKGGKTPQNGA-KDQSP 303          
BLAST of GR396766 vs. TrEMBL
Match: D7TFU7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_132.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000318001 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.578e-12
Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = -3
Query:  221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSP-KGFAGKGQTP 421
            PA  + +    KRP   A+KTPVP KKAK  +P+ TDGKK GAHTATPHP KK GK+P  G  GK Q+P
Sbjct:   10 PASLLLIQPGKKRPTESATKTPVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKEQSP 78          
BLAST of GR396766 vs. TrEMBL
Match: D7T182_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037303001 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.367e-12
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = -3
Query:  221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSP-KGFAGKGQTP 421
            PA  + V    KRP   A+KT VP KKAK  +P+ TDGKK GAHTATPHP KK GK+P  G  GKGQ+P
Sbjct:   10 PASLLLVQPGKKRPTESATKTLVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKGQSP 78          
BLAST of GR396766 vs. TrEMBL
Match: Q3E700_ARATH (Putative uncharacterized protein At5g22650.2 OS=Arabidopsis thaliana GN=At5g22650 PE=4 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.350e-11
Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKKGAHTATPHPMKKGGKSP 415
            K+   INK KRPN   SKTPV  KKAK A     TP+KT+ KKG HTATPHP KKGGKSP
Sbjct:  201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSP 259          
BLAST of GR396766 vs. TrEMBL
Match: D7M1H6_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_662070 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.763e-9
Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = -3
Query:  251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKK-GAHTATPHPMKKGGKSP 415
            K+   INK KRPN   SKTPV  KKAK A     TP+KT+ KK G HTATPHP KK GKSP
Sbjct:  209 KKPEPINK-KRPNESTSKTPVSGKKAKPAAAPAATPQKTEEKKKGGHTATPHPAKKSGKSP 268          
BLAST of GR396766 vs. TrEMBL
Match: D7TJ15_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033774001 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.014e-8
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = -3
Query:  251 KRPNGFASKTPVPTKKAKNATPEKTDGKK------GAHTATPHPMKKGGKSP 388
            KRP    SKTPVP KKAK  TP+KTDGKK      G H ATP+P K+ GK+P
Sbjct:   54 KRPTESVSKTPVPDKKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQAGKTP 105          
BLAST of GR396766 vs. TrEMBL
Match: B9SN80_RICCO (Histone deacetylase 2a, putative OS=Ricinus communis GN=RCOM_1186440 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.729e-8
Identity = 34/56 (60.71%), Postives = 36/56 (64.29%), Query Frame = -3
Query:  224 KRPNGFASKTPVPTKKAKNATPEKT-DGKKGAHTATPHPMKKGGKSPKGFAGKGQT 388
            KR N  A KTPV +KKAK  TP+KT DGKKG HTATPHP K    S  G   K QT
Sbjct:  220 KRQNDSAVKTPVSSKKAKLITPQKTADGKKGGHTATPHPAKGAKASANGNTPKPQT 275          
BLAST of GR396766 vs. TAIR peptide
Match: AT5G22650.2 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=305)

HSP 1 Score: 70.4774 bits (171), Expect = 4.706e-13
Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKKGAHTATPHPMKKGGKSP 415
            K+   INK KRPN   SKTPV  KKAK A     TP+KT+ KKG HTATPHP KKGGKSP
Sbjct:  201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSP 259          
BLAST of GR396766 vs. TAIR peptide
Match: AT5G22650.1 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, ATHD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=306)

HSP 1 Score: 65.855 bits (159), Expect = 1.159e-11
Identity = 39/61 (63.93%), Postives = 42/61 (68.85%), Query Frame = -3
Query:  251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKK-GAHTATPHPMKKGGKSP 415
            K+   INK KRPN   SKTPV  KKAK A     TP+KT+ KK G HTATPHP KKGGKSP
Sbjct:  201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSP 260          
BLAST of GR396766 vs. TAIR peptide
Match: AT5G03740.1 (| Symbols: HD2C, HDT3 | histone deacetylase 2C | chr5:981994-983961 FORWARD LENGTH=294)

HSP 1 Score: 51.2174 bits (121), Expect = 2.954e-7
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = -3
Query:  245 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSPKG 421
            P K      ++  PN  +SK P   KKAK  TP+KTD KK   H ATPHP K+ GK+  G
Sbjct:  191 PKKPEEPKKRSAEPN--SSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGG 248          
The following BLAST results are available for this feature:
BLAST of GR396766 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
HDT1_SOYBN2.715e-1664.18Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE... [more]
HDT2_ARATH9.994e-1163.93Histone deacetylase HDT2 OS=Arabidopsis thaliana G... [more]
HDT1_SOLCH7.162e-960.42Histone deacetylase HDT1 OS=Solanum chacoense GN=H... [more]
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BLAST of GR396766 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TJ33_SOYBN2.943e-1676.79Putative uncharacterized protein OS=Glycine max PE... [more]
C6TGQ0_SOYBN3.844e-1668.66Putative uncharacterized protein OS=Glycine max PE... [more]
D7SN59_VITVI1.785e-1368.97Whole genome shotgun sequence of line PN40024, sca... [more]
Q2PF09_TRIPR2.578e-1264.91Putative Nucleolar histone deacetylase OS=Trifoliu... [more]
D7TFU7_VITVI2.578e-1257.97Whole genome shotgun sequence of line PN40024, sca... [more]
D7T182_VITVI3.367e-1259.42Whole genome shotgun sequence of line PN40024, sca... [more]
Q3E700_ARATH6.350e-1165.00Putative uncharacterized protein At5g22650.2 OS=Ar... [more]
D7M1H6_ARALY7.763e-962.30Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
D7TJ15_VITVI1.014e-859.62Whole genome shotgun sequence of line PN40024, sca... [more]
B9SN80_RICCO1.729e-860.71Histone deacetylase 2a, putative OS=Ricinus commun... [more]
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BLAST of GR396766 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G22650.24.706e-1365.00| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 | ... [more]
AT5G22650.11.159e-1163.93| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, A... [more]
AT5G03740.12.954e-746.67| Symbols: HD2C, HDT3 | histone deacetylase 2C | c... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 55..69
score
NoneNo IPR availableSEGsegsegcoord: 22..39
score: NAcoord: 107..120
score
NoneNo IPR availableSEGsegsegcoord: 1..14
score: NAcoord: 82..93
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR396766 ID=GR396766; Name=GR396766; organism=Cicer arietinum; type=EST; length=465bp
CTTTTTTCAAAACAAATTTTCCAAAACATGATTACATCTTTGACTGTTCA
ATAGTCCAAAGTGAGGATAAAACATCAAACAGATTTTACCAATACTCACT
GTAATACAGGGGAAAATTACTACACAAATATGGTAATAAATGCAAAATCA
CCGACCACCATGCTTACTTAGTCCTTTTTTGCTGTTTACCACCTTTGAAG
TTGCCAAACTTGTTAAAATTGGGAGTCTGGCCCTTCCCAGCAAAACCCTT
TGGGGATTTTCCACCTTTCTTCATAGGGTGGGGAGTTGCAGTATGTGCAC
CTTTCTTACCATCAGTCTTTTCAGGAGTAGCATTTTTAGCTTTCTTGGTA
GGAACTGGGGTTTTTGATGCAAACCCGTTGGGTCTCTTGTTCTTATTGAT
CACAGTCACCTCCTTAGCTGGAGTTTCTTCGTCACTCTCACTGTCCTCAT
CACTATCTGTATCGG
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