GR396766
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR396766 vs. SwissProt
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.715e-16 Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = -3 Query: 221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 421 PAK+V KRPN A+KTP+ KKAK ATPEKTDGKK H ATPHP KKGGK+P + KGQTP Sbjct: 201 PAKKVD--QGKKRPNESAAKTPISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPN--STKGQTP 263
BLAST of GR396766 vs. SwissProt
Match: HDT2_ARATH (Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2 PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 9.994e-11 Identity = 39/61 (63.93%), Postives = 42/61 (68.85%), Query Frame = -3 Query: 251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKK-GAHTATPHPMKKGGKSP 415 K+ INK KRPN SKTPV KKAK A TP+KT+ KK G HTATPHP KKGGKSP Sbjct: 201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSP 260
BLAST of GR396766 vs. SwissProt
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 7.162e-9 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = -3 Query: 248 KRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSPK 388 +R A+KTPV KKAK TP+KTDGKK G H ATPHP K+ K+PK Sbjct: 190 RRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTPK 237
BLAST of GR396766 vs. TrEMBL
Match: C6TJ33_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.943e-16 Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = -3 Query: 221 KRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 388 KRPN ASKTPV +KKAKNATPEKTDGKKG HTATPHP KKGGK+P A K +TP Sbjct: 215 KRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPSSEA-KAKTP 269
BLAST of GR396766 vs. TrEMBL
Match: C6TGQ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.844e-16 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = -3 Query: 221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 421 P K+V + KRPN ASKTPV +KKAKNATPEKTDGKKG HTATPHP KKGGK+P A K +TP Sbjct: 203 PPKKVDL--GKKRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPNREA-KAKTP 266
BLAST of GR396766 vs. TrEMBL
Match: D7SN59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031404001 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.785e-13 Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 221 KRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSP-KGFAGKGQTP 388 KRP A+KTPVP KKAK +P+KTDGKK GAHTATPHP KK GK+P G GKGQ+P Sbjct: 264 KRPTESATKTPVPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSP 321
BLAST of GR396766 vs. TrEMBL
Match: Q2PF09_TRIPR (Putative Nucleolar histone deacetylase OS=Trifolium pratense PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.578e-12 Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = -3 Query: 221 NKRPNGFASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGFAGKGQTP 391 NKRPN A +TPV K+AKNATP KTD KK H ATPHP KKGGK+P+ A K Q+P Sbjct: 248 NKRPNEAAPQTPVSAKRAKNATPGKTDDKKAVHIATPHPNKKGGKTPQNGA-KDQSP 303
BLAST of GR396766 vs. TrEMBL
Match: D7TFU7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_132.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000318001 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.578e-12 Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSP-KGFAGKGQTP 421 PA + + KRP A+KTPVP KKAK +P+ TDGKK GAHTATPHP KK GK+P G GK Q+P Sbjct: 10 PASLLLIQPGKKRPTESATKTPVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKEQSP 78
BLAST of GR396766 vs. TrEMBL
Match: D7T182_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037303001 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.367e-12 Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 221 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSP-KGFAGKGQTP 421 PA + V KRP A+KT VP KKAK +P+ TDGKK GAHTATPHP KK GK+P G GKGQ+P Sbjct: 10 PASLLLVQPGKKRPTESATKTLVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKGQSP 78
BLAST of GR396766 vs. TrEMBL
Match: Q3E700_ARATH (Putative uncharacterized protein At5g22650.2 OS=Arabidopsis thaliana GN=At5g22650 PE=4 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.350e-11 Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKKGAHTATPHPMKKGGKSP 415 K+ INK KRPN SKTPV KKAK A TP+KT+ KKG HTATPHP KKGGKSP Sbjct: 201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSP 259
BLAST of GR396766 vs. TrEMBL
Match: D7M1H6_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_662070 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.763e-9 Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = -3 Query: 251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKK-GAHTATPHPMKKGGKSP 415 K+ INK KRPN SKTPV KKAK A TP+KT+ KK G HTATPHP KK GKSP Sbjct: 209 KKPEPINK-KRPNESTSKTPVSGKKAKPAAAPAATPQKTEEKKKGGHTATPHPAKKSGKSP 268
BLAST of GR396766 vs. TrEMBL
Match: D7TJ15_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033774001 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.014e-8 Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = -3 Query: 251 KRPNGFASKTPVPTKKAKNATPEKTDGKK------GAHTATPHPMKKGGKSP 388 KRP SKTPVP KKAK TP+KTDGKK G H ATP+P K+ GK+P Sbjct: 54 KRPTESVSKTPVPDKKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQAGKTP 105
BLAST of GR396766 vs. TrEMBL
Match: B9SN80_RICCO (Histone deacetylase 2a, putative OS=Ricinus communis GN=RCOM_1186440 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.729e-8 Identity = 34/56 (60.71%), Postives = 36/56 (64.29%), Query Frame = -3 Query: 224 KRPNGFASKTPVPTKKAKNATPEKT-DGKKGAHTATPHPMKKGGKSPKGFAGKGQT 388 KR N A KTPV +KKAK TP+KT DGKKG HTATPHP K S G K QT Sbjct: 220 KRQNDSAVKTPVSSKKAKLITPQKTADGKKGGHTATPHPAKGAKASANGNTPKPQT 275
BLAST of GR396766 vs. TAIR peptide
Match: AT5G22650.2 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=305) HSP 1 Score: 70.4774 bits (171), Expect = 4.706e-13 Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKKGAHTATPHPMKKGGKSP 415 K+ INK KRPN SKTPV KKAK A TP+KT+ KKG HTATPHP KKGGKSP Sbjct: 201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSP 259
BLAST of GR396766 vs. TAIR peptide
Match: AT5G22650.1 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, ATHD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=306) HSP 1 Score: 65.855 bits (159), Expect = 1.159e-11 Identity = 39/61 (63.93%), Postives = 42/61 (68.85%), Query Frame = -3 Query: 251 KEVTVINKNKRPNGFASKTPVPTKKAKNA-----TPEKTDGKK-GAHTATPHPMKKGGKSP 415 K+ INK KRPN SKTPV KKAK A TP+KT+ KK G HTATPHP KKGGKSP Sbjct: 201 KKPEPINK-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSP 260
BLAST of GR396766 vs. TAIR peptide
Match: AT5G03740.1 (| Symbols: HD2C, HDT3 | histone deacetylase 2C | chr5:981994-983961 FORWARD LENGTH=294) HSP 1 Score: 51.2174 bits (121), Expect = 2.954e-7 Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = -3 Query: 245 PAKEVTVINKNKRPNGFASKTPVPTKKAKNATPEKTDGKK-GAHTATPHPMKKGGKSPKG 421 P K ++ PN +SK P KKAK TP+KTD KK H ATPHP K+ GK+ G Sbjct: 191 PKKPEEPKKRSAEPN--SSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGG 248 The following BLAST results are available for this feature:
BLAST of GR396766 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 3
BLAST of GR396766 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR396766 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR396766 ID=GR396766; Name=GR396766; organism=Cicer arietinum; type=EST; length=465bpback to top |