GR397127

EST Overview
NameGR397127
Unique NameGR397127
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length500
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR397127 vs. TrEMBL
Match: B7FID1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.992e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQ 188
            QQVEGAQDVSAMSVPT+EQREELYDPLA+PDVDKLNAAYLSVHG+AILGRS WHKTHSSSLQ
Sbjct:   76 QQVEGAQDVSAMSVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQ 137          
BLAST of GR397127 vs. TrEMBL
Match: B9RIB9_RICCO (Nuclear acid binding protein, putative OS=Ricinus communis GN=RCOM_1577640 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.553e-15
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSS 179
            QQV+G QD++  ++P +EQREELYDPLA PDVDKLN AYLSVHG+AILGR  W KT  S
Sbjct:  352 QQVDGVQDMTG-AIPVVEQREELYDPLAAPDVDKLNGAYLSVHGNAILGRPLWMKTSLS 409          
BLAST of GR397127 vs. TrEMBL
Match: B9HNV7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_1087962 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.756e-14
Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQ 188
            QQVEGA D++ + VP  E REE YDPLA PDVDKLNAAYLS HGSAI GR+ W KT S + Q
Sbjct:  353 QQVEGAPDMAGV-VPVAEHREESYDPLAAPDVDKLNAAYLSTHGSAIFGRTLWMKTSSLTQQ 413          
BLAST of GR397127 vs. TrEMBL
Match: D7SL59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025280001 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.197e-13
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 3
Query:   33 AMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKT 170
            A +VP +EQR+ELYDPLA PDVDKLNAAYL+VHGSAILGRS W KT
Sbjct:  393 AGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKT 438          
BLAST of GR397127 vs. TrEMBL
Match: C4IYK3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.400e-12
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 QQVEGAQDVSAM--SVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTH 173
            QQVEG  D +++  S P MEQ+EE YDP+ +PDVDKLNA+Y++VHG A+LGRS W KT+
Sbjct:  351 QQVEGTVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTN 409          
BLAST of GR397127 vs. TrEMBL
Match: B6UA93_MAIZE (RNA-binding post-transcriptional regulator csx1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.400e-12
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 QQVEGAQDVSAM--SVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTH 173
            QQVEG  D +++  S P MEQ+EE YDP+ +PDVDKLNA+Y++VHG A+LGRS W KT+
Sbjct:  351 QQVEGTVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTN 409          
BLAST of GR397127 vs. TrEMBL
Match: Q8VXZ9_ARATH (Putative DNA binding protein ACBF OS=Arabidopsis thaliana GN=At5g19350 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.747e-12
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191
            QQ EG QD+S  +   +   E ELYDPLA PDVDKLNAAYLSVH SAILGR  W +T S + QL
Sbjct:  360 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 423          
BLAST of GR397127 vs. TrEMBL
Match: Q56ZT9_ARATH (DNA binding protein ACBF-like (Fragment) OS=Arabidopsis thaliana GN=At5g19350 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.747e-12
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191
            QQ EG QD+S  +   +   E ELYDPLA PDVDKLNAAYLSVH SAILGR  W +T S + QL
Sbjct:   64 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 127          
BLAST of GR397127 vs. TrEMBL
Match: C5WVW4_SORBI (Putative uncharacterized protein Sb01g045570 OS=Sorghum bicolor GN=Sb01g045570 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.747e-12
Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 QQVEGAQDVSAM--SVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTH 173
            QQ+EG  D +++  S P MEQ+EE YDP+ +PDVDKLNA+Y++VHG A+LGRS W KT+
Sbjct:  351 QQIEGGVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTN 409          
BLAST of GR397127 vs. TrEMBL
Match: Q10R21_ORYSJ (RNA recognition motif family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g07800 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.865e-11
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 3
Query:    3 QQVEGAQDVSAMS---VPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHS 176
            QQVEGA D+++ +    P ME +EE+YDP+ LPDVDKLNA+Y++VHG A+LGRS W +T S
Sbjct:  352 QQVEGATDMASAAGSHAPGME-KEEVYDPMNLPDVDKLNASYIAVHGRAMLGRSLWLRTSS 411          
BLAST of GR397127 vs. TAIR peptide
Match: AT5G19350.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=421)

HSP 1 Score: 73.9442 bits (180), Expect = 4.995e-14
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191
            QQ EG QD+S  +   +   E ELYDPLA PDVDKLNAAYLSVH SAILGR  W +T S + QL
Sbjct:  356 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 419          
BLAST of GR397127 vs. TAIR peptide
Match: AT5G19350.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=425)

HSP 1 Score: 73.9442 bits (180), Expect = 4.995e-14
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3
Query:    3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191
            QQ EG QD+S  +   +   E ELYDPLA PDVDKLNAAYLSVH SAILGR  W +T S + QL
Sbjct:  360 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 423          
The following BLAST results are available for this feature:
BLAST of GR397127 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FID1_MEDTR6.992e-2693.55Putative uncharacterized protein OS=Medicago trunc... [more]
B9RIB9_RICCO5.553e-1569.49Nuclear acid binding protein, putative OS=Ricinus ... [more]
B9HNV7_POPTR2.756e-1467.74Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SL59_VITVI5.197e-1380.43Whole genome shotgun sequence of line PN40024, sca... [more]
C4IYK3_MAIZE4.400e-1261.02Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6UA93_MAIZE4.400e-1261.02RNA-binding post-transcriptional regulator csx1 OS... [more]
Q8VXZ9_ARATH5.747e-1262.50Putative DNA binding protein ACBF OS=Arabidopsis t... [more]
Q56ZT9_ARATH5.747e-1262.50DNA binding protein ACBF-like (Fragment) OS=Arabid... [more]
C5WVW4_SORBI5.747e-1259.32Putative uncharacterized protein Sb01g045570 OS=So... [more]
Q10R21_ORYSJ4.865e-1159.02RNA recognition motif family protein, expressed OS... [more]
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BLAST of GR397127 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G19350.24.995e-1462.50| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT5G19350.14.995e-1462.50| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR397127 ID=GR397127; Name=GR397127; organism=Cicer arietinum; type=EST; length=500bp
CCCAACAGGTTGAAGGTGCCCAAGACGTATCAGCTATGTCTGTGCCTACC
ATGGAACAAAGGGAGGAGTTGTATGATCCTCTGGCATTGCCTGATGTTGA
TAAGTTAAATGCTGCATATCTCTCAGTACATGGAAGTGCCATTTTAGGGC
GGTCTCCCTGGCACAAAACCCATTCCTCATCCTTACAGCTGGCTTAGGAT
CTATCTGTATTTTCACTACCAGGTTTTATATTTCACTATATTCCTGTTAT
TTGAGTCAATCCAAAATGCTTTTCCCATGTGGTTAGCTGGTGTAAAGATA
TGAATATTAGCATATCAGTAGACATCAGTCTTTAATCAGATTGATCCCAT
TGATTATCTTTTGTTTGTGAGCATTTAGATAAAGGAGTCTTATATTAAGA
GACAGATAGAGTATTGTATGGCAGGGAAACTTCAACCTCTATTATGAGTT
GATATATATCGATTTAATCAGTTCATTATGAGCGAGCATACATGTTTCAT
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