GR397127
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR397127 vs. TrEMBL
Match: B7FID1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.992e-26 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQ 188 QQVEGAQDVSAMSVPT+EQREELYDPLA+PDVDKLNAAYLSVHG+AILGRS WHKTHSSSLQ Sbjct: 76 QQVEGAQDVSAMSVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQ 137
BLAST of GR397127 vs. TrEMBL
Match: B9RIB9_RICCO (Nuclear acid binding protein, putative OS=Ricinus communis GN=RCOM_1577640 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.553e-15 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSS 179 QQV+G QD++ ++P +EQREELYDPLA PDVDKLN AYLSVHG+AILGR W KT S Sbjct: 352 QQVDGVQDMTG-AIPVVEQREELYDPLAAPDVDKLNGAYLSVHGNAILGRPLWMKTSLS 409
BLAST of GR397127 vs. TrEMBL
Match: B9HNV7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_1087962 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.756e-14 Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQ 188 QQVEGA D++ + VP E REE YDPLA PDVDKLNAAYLS HGSAI GR+ W KT S + Q Sbjct: 353 QQVEGAPDMAGV-VPVAEHREESYDPLAAPDVDKLNAAYLSTHGSAIFGRTLWMKTSSLTQQ 413
BLAST of GR397127 vs. TrEMBL
Match: D7SL59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025280001 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.197e-13 Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 3 Query: 33 AMSVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKT 170 A +VP +EQR+ELYDPLA PDVDKLNAAYL+VHGSAILGRS W KT Sbjct: 393 AGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKT 438
BLAST of GR397127 vs. TrEMBL
Match: C4IYK3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.400e-12 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 3 Query: 3 QQVEGAQDVSAM--SVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTH 173 QQVEG D +++ S P MEQ+EE YDP+ +PDVDKLNA+Y++VHG A+LGRS W KT+ Sbjct: 351 QQVEGTVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTN 409
BLAST of GR397127 vs. TrEMBL
Match: B6UA93_MAIZE (RNA-binding post-transcriptional regulator csx1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.400e-12 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 3 Query: 3 QQVEGAQDVSAM--SVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTH 173 QQVEG D +++ S P MEQ+EE YDP+ +PDVDKLNA+Y++VHG A+LGRS W KT+ Sbjct: 351 QQVEGTVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTN 409
BLAST of GR397127 vs. TrEMBL
Match: Q8VXZ9_ARATH (Putative DNA binding protein ACBF OS=Arabidopsis thaliana GN=At5g19350 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.747e-12 Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191 QQ EG QD+S + + E ELYDPLA PDVDKLNAAYLSVH SAILGR W +T S + QL Sbjct: 360 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 423
BLAST of GR397127 vs. TrEMBL
Match: Q56ZT9_ARATH (DNA binding protein ACBF-like (Fragment) OS=Arabidopsis thaliana GN=At5g19350 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.747e-12 Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191 QQ EG QD+S + + E ELYDPLA PDVDKLNAAYLSVH SAILGR W +T S + QL Sbjct: 64 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 127
BLAST of GR397127 vs. TrEMBL
Match: C5WVW4_SORBI (Putative uncharacterized protein Sb01g045570 OS=Sorghum bicolor GN=Sb01g045570 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.747e-12 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 3 Query: 3 QQVEGAQDVSAM--SVPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTH 173 QQ+EG D +++ S P MEQ+EE YDP+ +PDVDKLNA+Y++VHG A+LGRS W KT+ Sbjct: 351 QQIEGGVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTN 409
BLAST of GR397127 vs. TrEMBL
Match: Q10R21_ORYSJ (RNA recognition motif family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g07800 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.865e-11 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 3 QQVEGAQDVSAMS---VPTMEQREELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHS 176 QQVEGA D+++ + P ME +EE+YDP+ LPDVDKLNA+Y++VHG A+LGRS W +T S Sbjct: 352 QQVEGATDMASAAGSHAPGME-KEEVYDPMNLPDVDKLNASYIAVHGRAMLGRSLWLRTSS 411
BLAST of GR397127 vs. TAIR peptide
Match: AT5G19350.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=421) HSP 1 Score: 73.9442 bits (180), Expect = 4.995e-14 Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191 QQ EG QD+S + + E ELYDPLA PDVDKLNAAYLSVH SAILGR W +T S + QL Sbjct: 356 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 419
BLAST of GR397127 vs. TAIR peptide
Match: AT5G19350.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=425) HSP 1 Score: 73.9442 bits (180), Expect = 4.995e-14 Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 3 QQVEGAQDVSAMSVPTMEQRE-ELYDPLALPDVDKLNAAYLSVHGSAILGRSPWHKTHSSSLQL 191 QQ EG QD+S + + E ELYDPLA PDVDKLNAAYLSVH SAILGR W +T S + QL Sbjct: 360 QQGEGTQDISNSAAGGVAGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQL 423 The following BLAST results are available for this feature:
BLAST of GR397127 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR397127 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR397127 ID=GR397127; Name=GR397127; organism=Cicer arietinum; type=EST; length=500bpback to top |