GR397398
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR397398 vs. TrEMBL
Match: C6TET3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.801e-18 Identity = 49/78 (62.82%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 1 DLQHIAQVIAINMVIGLSSNXXXXXXXXXXXXXXXXXXXXXXPAWKHESTSIDGRRLFIDSAPMYNLFKITRVPKQWK 234 DLQHIAQVIA+NMVIGL S PAWKHESTS DGRRLFID+APMY LFKI RVPKQWK Sbjct: 265 DLQHIAQVIALNMVIGLLSTGIDNWGHLGGLVGGVAASWFIGPAWKHESTSSDGRRLFIDTAPMYKLFKIKRVPKQWK 342
BLAST of GR397398 vs. TrEMBL
Match: D7T014_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_34.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022970001 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.098e-7 Identity = 31/73 (42.47%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 4 LQHIAQVIAINMVIGLSSNXXXXXXXXXXXXXXXXXXXXXXPAWKHESTSIDGRRLFIDSAPMYNLFKITRVP 222 LQHIA+VI +NMVIG S PAWK+ES S DGRR+F D AP+++L R P Sbjct: 258 LQHIARVIVLNMVIGCLSKGIDNWGHLGGLLGGLVTSWLLGPAWKYESLSNDGRRVFADRAPIFHLVNRRRKP 330
BLAST of GR397398 vs. TrEMBL
Match: A5BYB6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008789 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.098e-7 Identity = 31/73 (42.47%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 4 LQHIAQVIAINMVIGLSSNXXXXXXXXXXXXXXXXXXXXXXPAWKHESTSIDGRRLFIDSAPMYNLFKITRVP 222 LQHIA+VI +NMVIG S PAWK+ES S DGRR+F D AP+++L R P Sbjct: 174 LQHIARVIVLNMVIGCLSKGIDNWGHLGGLLGGLVTSWLLGPAWKYESLSNDGRRVFADRAPIFHLVNRRRKP 246
BLAST of GR397398 vs. TAIR peptide
Match: AT1G25290.2 (| Symbols: RBL10 | RHOMBOID-like protein 10 | chr1:8867157-8868945 FORWARD LENGTH=336) HSP 1 Score: 51.2174 bits (121), Expect = 1.510e-7 Identity = 26/64 (40.62%), Postives = 34/64 (53.12%), Query Frame = 1 Query: 1 DLQHIAQVIAINMVIGLSSNXXXXXXXXXXXXXXXXXXXXXXPAWKHESTSIDGRRLFIDSAPM 192 DL IAQ+IA+NM +GL S P WK+E T+ DGRR+F+DSAP+ Sbjct: 260 DLMQIAQIIALNMAMGLMSRRIDNWGHIGGLLGGTAMTWLLGPQWKYEYTTRDGRRVFMDSAPI 323
BLAST of GR397398 vs. TAIR peptide
Match: AT1G25290.1 (| Symbols: ATRBL10, RBL10 | RHOMBOID-like protein 10 | chr1:8867157-8868945 FORWARD LENGTH=343) HSP 1 Score: 51.2174 bits (121), Expect = 1.510e-7 Identity = 26/64 (40.62%), Postives = 34/64 (53.12%), Query Frame = 1 Query: 1 DLQHIAQVIAINMVIGLSSNXXXXXXXXXXXXXXXXXXXXXXPAWKHESTSIDGRRLFIDSAPM 192 DL IAQ+IA+NM +GL S P WK+E T+ DGRR+F+DSAP+ Sbjct: 267 DLMQIAQIIALNMAMGLMSRRIDNWGHIGGLLGGTAMTWLLGPQWKYEYTTRDGRRVFMDSAPI 330 The following BLAST results are available for this feature:
BLAST of GR397398 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 3
BLAST of GR397398 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR397398 ID=GR397398; Name=GR397398; organism=Cicer arietinum; type=EST; length=348bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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