GR400904

EST Overview


Name	GR400904
Unique Name	GR400904
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	475

Libraries


Library Name	Type
LIBEST_024783 ICC4958 Slow drought stresses root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR400904 vs. TrEMBL
Match: C7YRA5_NECH7 (Putative uncharacterized protein OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=NECHADRAFT_41896 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.306e-7
Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = 2

Query:  317 MVRESGISATKPVFPTFLLPSIKLPFSRRH 406
            MVRESGISATKP+FPT+LL +I+LPFSRRH
Sbjct:    1 MVRESGISATKPIFPTYLLSTIRLPFSRRH 30

The following BLAST results are available for this feature:

BLAST of GR400904 vs. TrEMBL

BLAST of GR400904 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
C7YRA5_NECH7	9.306e-7	83.33	Putative uncharacterized protein OS=Nectria haemat...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 65..86 score
None	No IPR available	SEG	seg	seg	coord: 9..23 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR400904 ID=GR400904; Name=GR400904; organism=Cicer arietinum; type=EST; length=475bp
GCGGGGAAACTCTCCTCTGGAAAACCCGTCGTTTGCGAACTTAGACACGA
CACCGCAGCGCCATTTCGCCATCGCCTCTCCAACGTTTCTGTCTCGAATG
CCATCTCTGACAGAGCCAAAACTTCCCAGGTCACATCTGGAAGGACTTTA
CGCCACTTGTGGAGCTCTTGGCGCCTTCAGTGGAACAGCTCTCCACGCCT
TATCAGTCCCCTAGCCTTCGATAGAAAGTTCCAAAAAGTCGGGAGGGCAT
TTCCATCTCTTCCAAGACGTTACACTTAGCAACTCCAAAAGAGACGCCAA
CTTGACCATTGCCGAGATGGTTCGCGAGAGTGGCATCTCGGCTACCAAGC
CAGTCTTTCCTACTTTCTTACTACCCAGCATAAAGCTTCCCTTCTCCCGA
CGCCACTCGGTCTCCTCGAGTTCCGCAGAATCTGCCGCATCCTCAGCAGT
GACAACACCAGCGAGCTCGCCACCT

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