GR401028

EST Overview
NameGR401028
Unique NameGR401028
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length498
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR401028 vs. TrEMBL
Match: B9HJC8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_656934 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.414e-8
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = -3 
Query:  347 SYKAILKV----ENGILKLRIEYEKLNDDTPPPKKYQQFIINIVRDIDANLVK 493
            SYK  LK     E G++K+ ++YEKL  D PPP KY  F+IN+V+DID +LVK
Sbjct:   97 SYKITLKTVSMAEGGVVKILLDYEKLKPDDPPPNKYLDFVINVVKDIDEHLVK 149
[Close]
BLAST of GR401028 vs. TrEMBL
Match: A9PJR6_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.183e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = -3 
Query:  347 SYKAILKV----ENGILKLRIEYEKLNDDTPPPKKYQQFIINIVRDIDANLVK 493
            SYK  LK     E G++K+ ++YEKL  D PPP KY  F+I +V+DID +LVK
Sbjct:   97 SYKITLKTVSMAEGGVVKILLDYEKLKPDDPPPNKYLDFVIKVVKDIDEHLVK 149
The following BLAST results are available for this feature:
BLAST of GR401028 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9HJC8_POPTR6.414e-852.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PJR6_9ROSI3.183e-750.94Putative uncharacterized protein OS=Populus tricho... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000916Bet v I allergenPFAMPF00407Bet_v_1coord: 10..50
score: 2.6
NoneNo IPR availableGENE3D3.30.530.20no descriptioncoord: 8..50
score: 7.8
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 2..51
score: 1.5

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR401028 ID=GR401028; Name=GR401028; organism=Cicer arietinum; type=EST; length=498bp
AAAAAAAAATGTATTCTCAATCAATGTAACTTTGTTATCAATGCAAATTT
TTGTAAAAAGATAAATATACAATCTTCAATTAAGCTCCATTTATTTATAG
GATCTTGCTAACCAAGTGCGCAAGCGTAATGGCTAGCCTTTTCCTTATTC
ATATGTCCATATAAAAAGTAACAACAATACACACTCTTTGACACATTATA
ATTAGATAAATTACATGTTGGTCATATAATTATCATGTTTCCATCATATC
ACTTGCATGAAATTCACCTAATAAATGTGTTGAAAATAGTATATTACTGA
TATATTTTAATATGATCAGAAACTAAATAGACATCAAAGGTTAACCTTTG
ACTAAATTTGCATCAATGTCCCTGACGATATTAATGATAAATTGCTGGTA
TTTCTTTGGTGGAGGGGTGTCATCATTGAGCTTCTCATATTCTATTCTTA
GTTTCAGTATTCCGTTCTCAACCTTCAAGATGGCCTTGTAGCTCCCGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
GO:0009607response to biotic stimulus
Vocabulary: INTERPRO
TermDefinition
IPR000916Bet_v_I/MLP