GR404302

EST Overview
NameGR404302
Unique NameGR404302
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length339
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of GR404302 vs. TrEMBL
Match: B9SQT4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1217400 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.021e-9
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1 
Query:    1 RASSIQRPRAVVSSPENDILIGNRNKIGNGRQSALKNRTVLPNRHSQAQCKVKSHDTTDIPPDSRKCAEPKSKDKIDPVGKK 246
            RAS + RPRAV+SSP+ND LI N+N++   + SALKN  ++ +RH  AQCKV      D  P +   ++  +  KID  G K
Sbjct:  109 RASLVPRPRAVISSPDNDALIANKNRVKATQPSALKNHNLIRSRH--AQCKVVPSQAIDESPLNTSKSKDTTDKKIDVRGTK 188
[Close]
BLAST of GR404302 vs. TrEMBL
Match: D7U365_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028417001 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.187e-7
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 
Query:    1 RASSIQRPRAVVSSPENDILIGNRNKIGNGRQSALKNRTVLPNRHSQAQCKVKSHDTTDIPPDSRKCAEPKSKDKI 228
            RA S+ RPRAV+SSP+ND +IGN+NK+ + R S  K +++  NRH Q + ++  H     PP  RK   P +  ++
Sbjct:  131 RACSVPRPRAVLSSPDNDGMIGNQNKLISNR-SIPKEQSLKQNRHVQIK-EIPIHGKAGSPPSMRKREAPNTNSRL 204
The following BLAST results are available for this feature:
BLAST of GR404302 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9SQT4_RICCO2.021e-943.90Putative uncharacterized protein OS=Ricinus commun... [more]
D7U365_VITVI7.187e-740.79Whole genome shotgun sequence of line PN40024, sca... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404302 ID=GR404302; Name=GR404302; organism=Cicer arietinum; type=EST; length=339bp
AGAGCTAGTTCAATTCAACGCCCTCGTGCTGTCGTTTCTAGTCCTGAAAA
TGACATATTGATCGGGAACCGAAACAAGATAGGAAATGGAAGACAATCTG
CTTTGAAGAACAGAACTGTTTTGCCAAATAGACATTCACAAGCTCAATGT
AAAGTGAAATCACACGACACTACTGATATTCCTCCCGATTCAAGAAAATG
CGCAGAGCCTAAGTCTAAAGATAAAATTGATCCTGTAGGAAAGAAAAAGG
TGCATAAAGGTAGCATCAAAACTGAAAGTTTACACAGGCACTGGAAGTTT
TAGTTTTCTTCTTTATAATTTAGGAGCACGACAAGCTAC
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