GR406528
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406528 vs. TrEMBL
Match: B9SK72_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1028070 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 6.863e-19 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 224 YIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGT---EIISAAASSLNKFANDGSFMRELFS 400 Y+ + S+RH EM+APK DSLSWGK+ KSQ + IISAA S +NKFA+DGSF+ + S Sbjct: 273 YLKDLSVRHSEMRAPKAHDSLSWGKR-KSQKLSSNDASIISAAVSGMNKFADDGSFLSNILS 333 HSP 2 Score: 48.521 bits (114), Expect = 6.863e-19 Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 529 KNEEADKLMEEAKVLNTKEGNEEDHTIRSRTDGSSRRYAMQRISAEQKKGEDDADMHLACNIM 717 K+EEADKLMEEAK + K+G E + R + + S+ RY Q A +K E+DAD HLA I+ Sbjct: 392 KHEEADKLMEEAKNIKVKQGAGEILS-RPQKNVSTNRYVAQEFPARRK--EEDADRHLAQKII 451 HSP 3 Score: 25.409 bits (54), Expect = 6.863e-19 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 441 LKPKKVFSDVNTPGE*KAVVKNKMSANQL 527 ++ K S++N+P E A K +SANQL Sbjct: 352 VESKVTSSEMNSPSEGIATAKEALSANQL 380
BLAST of GR406528 vs. TrEMBL
Match: D7T7A9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018130001 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.511e-10 Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 2 Query: 218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNSDGSILESF 442 ++Y+ + S+R+ EMKAPKV +SLSWGK+ K Q T+ +IS A +SLNKFANDGSFM E+ +++ ++ G + S+ Sbjct: 355 REYLKDVSVRNPEMKAPKVHNSLSWGKR-KGQNVSTKDVGLISDAVASLNKFANDGSFMHEVVHRQNIDTGGPLGSSY 431
BLAST of GR406528 vs. TrEMBL
Match: D7KAY9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_892793 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.475e-8 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418 ++Y+ SL H ++APK SLSWGK+ KSQ E +IS AA+ LNKF+NDG+FM+E+ SK+ S Sbjct: 234 REYLKGDSLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSRLISEAAAHLNKFSNDGNFMKEMLSKQKNVS 302
BLAST of GR406528 vs. TrEMBL
Match: Q9C7K4_ARATH (Putative uncharacterized protein F14G9.10 OS=Arabidopsis thaliana GN=F14G9.10 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.926e-8 Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418 ++Y+ SL H ++APK SLSWGK+ KSQ E +IS AA+ +NKF+NDG+FM+E+ SK+ S Sbjct: 350 REYLKGESLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVS 418
BLAST of GR406528 vs. TrEMBL
Match: Q93ZX4_ARATH (Putative uncharacterized protein At1g56290 OS=Arabidopsis thaliana GN=At1g56290 PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.926e-8 Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418 ++Y+ SL H ++APK SLSWGK+ KSQ E +IS AA+ +NKF+NDG+FM+E+ SK+ S Sbjct: 235 REYLKGESLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVS 303
BLAST of GR406528 vs. TAIR peptide
Match: AT1G56290.1 (| Symbols: | CwfJ-like family protein | chr1:21075939-21078608 FORWARD LENGTH=692) HSP 1 Score: 63.5438 bits (153), Expect = 1.297e-10 Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418 ++Y+ SL H ++APK SLSWGK+ KSQ E +IS AA+ +NKF+NDG+FM+E+ SK+ S Sbjct: 235 REYLKGESLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVS 303 The following BLAST results are available for this feature:
BLAST of GR406528 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
BLAST of GR406528 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406528 ID=GR406528; Name=GR406528; organism=Cicer arietinum; type=EST; length=718bpback to top |