GR406528

EST Overview
NameGR406528
Unique NameGR406528
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length718
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406528 vs. TrEMBL
Match: B9SK72_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1028070 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.863e-19
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 2
Query:  224 YIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGT---EIISAAASSLNKFANDGSFMRELFS 400
            Y+ + S+RH EM+APK  DSLSWGK+ KSQ   +    IISAA S +NKFA+DGSF+  + S
Sbjct:  273 YLKDLSVRHSEMRAPKAHDSLSWGKR-KSQKLSSNDASIISAAVSGMNKFADDGSFLSNILS 333          

HSP 2 Score: 48.521 bits (114), Expect = 6.863e-19
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  529 KNEEADKLMEEAKVLNTKEGNEEDHTIRSRTDGSSRRYAMQRISAEQKKGEDDADMHLACNIM 717
            K+EEADKLMEEAK +  K+G  E  + R + + S+ RY  Q   A +K  E+DAD HLA  I+
Sbjct:  392 KHEEADKLMEEAKNIKVKQGAGEILS-RPQKNVSTNRYVAQEFPARRK--EEDADRHLAQKII 451          

HSP 3 Score: 25.409 bits (54), Expect = 6.863e-19
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3
Query:  441 LKPKKVFSDVNTPGE*KAVVKNKMSANQL 527
            ++ K   S++N+P E  A  K  +SANQL
Sbjct:  352 VESKVTSSEMNSPSEGIATAKEALSANQL 380          
BLAST of GR406528 vs. TrEMBL
Match: D7T7A9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018130001 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.511e-10
Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 2
Query:  218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNSDGSILESF 442
            ++Y+ + S+R+ EMKAPKV +SLSWGK+ K Q   T+   +IS A +SLNKFANDGSFM E+  +++ ++ G +  S+
Sbjct:  355 REYLKDVSVRNPEMKAPKVHNSLSWGKR-KGQNVSTKDVGLISDAVASLNKFANDGSFMHEVVHRQNIDTGGPLGSSY 431          
BLAST of GR406528 vs. TrEMBL
Match: D7KAY9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_892793 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.475e-8
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418
            ++Y+   SL H  ++APK   SLSWGK+ KSQ    E   +IS AA+ LNKF+NDG+FM+E+ SK+   S
Sbjct:  234 REYLKGDSLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSRLISEAAAHLNKFSNDGNFMKEMLSKQKNVS 302          
BLAST of GR406528 vs. TrEMBL
Match: Q9C7K4_ARATH (Putative uncharacterized protein F14G9.10 OS=Arabidopsis thaliana GN=F14G9.10 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.926e-8
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418
            ++Y+   SL H  ++APK   SLSWGK+ KSQ    E   +IS AA+ +NKF+NDG+FM+E+ SK+   S
Sbjct:  350 REYLKGESLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVS 418          
BLAST of GR406528 vs. TrEMBL
Match: Q93ZX4_ARATH (Putative uncharacterized protein At1g56290 OS=Arabidopsis thaliana GN=At1g56290 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.926e-8
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418
            ++Y+   SL H  ++APK   SLSWGK+ KSQ    E   +IS AA+ +NKF+NDG+FM+E+ SK+   S
Sbjct:  235 REYLKGESLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVS 303          
BLAST of GR406528 vs. TAIR peptide
Match: AT1G56290.1 (| Symbols: | CwfJ-like family protein | chr1:21075939-21078608 FORWARD LENGTH=692)

HSP 1 Score: 63.5438 bits (153), Expect = 1.297e-10
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  218 QDYIINASLRHHEMKAPKVQDSLSWGKKYKSQFFGTE---IISAAASSLNKFANDGSFMRELFSKESGNS 418
            ++Y+   SL H  ++APK   SLSWGK+ KSQ    E   +IS AA+ +NKF+NDG+FM+E+ SK+   S
Sbjct:  235 REYLKGESLNHRVLRAPKTDPSLSWGKR-KSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVS 303          
The following BLAST results are available for this feature:
BLAST of GR406528 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
B9SK72_RICCO6.863e-1954.84Nucleic acid binding protein, putative OS=Ricinus ... [more]
D7T7A9_VITVI3.511e-1047.44Whole genome shotgun sequence of line PN40024, sca... [more]
D7KAY9_ARALY1.475e-848.57Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9C7K4_ARATH1.926e-847.14Putative uncharacterized protein F14G9.10 OS=Arabi... [more]
Q93ZX4_ARATH1.926e-847.14Putative uncharacterized protein At1g56290 OS=Arab... [more]
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BLAST of GR406528 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G56290.11.297e-1047.14| Symbols: | CwfJ-like family protein | chr1:2107... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 42..54
score
NoneNo IPR availableSEGsegsegcoord: 8..24
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406528 ID=GR406528; Name=GR406528; organism=Cicer arietinum; type=EST; length=718bp
GACGCTCACTTCTATTGTCTCTTACTATTTCAAAACTCCAAACTCCAAAA
CCATCCCGACTTTGTCATCAGCCGACCCAAGACCACCGACCTTCCGGCAG
CGTTTTCCGGCAACCCGACACCGTCCTTCTTTCTTTCTCAATCGTTTAGT
TCTGGCATTGGCAAGGTGTGACAATCTTGAAAATGTTTTTTCTGGGGTGA
AATTCATTATCCGTTATCAGGACTACATAATAAATGCTTCTCTTCGGCAC
CATGAAATGAAAGCACCTAAAGTTCAAGATTCTTTATCTTGGGGAAAAAA
GTACAAAAGCCAGTTTTTTGGTACTGAGATAATCTCCGCAGCAGCATCTA
GCTTAAATAAATTTGCTAATGACGGAAGCTTTATGCGTGAGTTATTTAGT
AAGGAGAGTGGCAATTCCGATGGCTCTATTTTGGAAAGTTTTGAAGCCGA
AAAAGGTTTTTTCAGATGTAAACACACCTGGTGAATGAAAGGCAGTAGTG
AAGAATAAGATGAGTGCAAACCAGTTGAAAGAATGAAGAAGCTGACAAGC
TAATGGAAGAAGCAAAGGTTTTGAACACAAAGGAGGGAAATGAAGAAGAT
CATACAATTAGATCAAGAACCGATGGAAGTTCTAGAAGGTATGCTATGCA
GAGGATATCTGCTGAACAGAAGAAAGGAGAAGACGATGCTGATATGCATC
TTGCTTGTAATATAATGC
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