GR407307

EST Overview
NameGR407307
Unique NameGR407307
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length566
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR407307 vs. TrEMBL
Match: C6TFZ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.829e-15
Identity = 51/92 (55.43%), Postives = 56/92 (60.87%), Query Frame = 1 
Query:   94 MAATTTTCSGFFN-LRXXXXXXXNGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVTATTS 366
            MAATTT+ S   +  R       +   GK + VAM FINGVT AFFASLNRCSCIRIAT           PLM NDGNLRHDGV +V  T S
Sbjct:    1 MAATTTSSSSSSDESRVSSTQASSSACGKFDGVAMWFINGVTTAFFASLNRCSCIRIATEEDGDDANDL-PLMLNDGNLRHDGVVAVVGTAS 91
[Close]
BLAST of GR407307 vs. TrEMBL
Match: A9PCJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823861 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.132e-12
Identity = 49/91 (53.85%), Postives = 54/91 (59.34%), Query Frame = 1 
Query:   94 MAATTTT-CSGFFNLRXXXXXXX----------NGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRH 333
            MAATT+T CS FF+LR                  GCG KL+ VAM FINGV  AFFASL RCSCIRIAT         A PL+ NDGN+RH
Sbjct:    1 MAATTSTNCSSFFSLRSNSVEPRVRTTSSHGSSPGCG-KLDGVAMWFINGVASAFFASLERCSCIRIATEDDGDEANDA-PLILNDGNMRH 89
[Close]
BLAST of GR407307 vs. TrEMBL
Match: A9PE30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816443 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.528e-10
Identity = 47/92 (51.09%), Postives = 51/92 (55.43%), Query Frame = 1 
Query:   94 MAATT--TTCSGFFNLRXXXXXXX----------NGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRH 333
            MAATT  T CS FFN R                  GCG KL+ VAM FINGV  AFFAS+ RCSCIRIAT         A PL+ +DGN RH
Sbjct:    1 MAATTSSTNCSSFFNPRSNSVEPRVRTSTSHGSSPGCG-KLDGVAMWFINGVAGAFFASMERCSCIRIATEDDGDEANDA-PLILHDGNTRH 90
The following BLAST results are available for this feature:
BLAST of GR407307 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C6TFZ6_SOYBN7.829e-1555.43Putative uncharacterized protein OS=Glycine max PE... [more]
A9PCJ9_POPTR2.132e-1253.85Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PE30_POPTR1.528e-1051.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 33..39
score: NAcoord: 76..84
score: NAcoord: 109..120
score
NoneNo IPR availableSEGsegsegcoord: 45..51
score
NoneNo IPR availableSEGsegsegcoord: 16..27
score
NoneNo IPR availableSEGsegsegcoord: 56..68
score: NAcoord: 92..100
score: NAcoord: 135..149
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407307 ID=GR407307; Name=GR407307; organism=Cicer arietinum; type=EST; length=566bp
GATAACCCAATTTTGTATTTCAATCAAAAACCAAAACGTTAACCTTTTGT
GATATTTGCTTTGTACAACCATATTGGTATACTAAACCGTCATATGGCTG
CCACCACCACCACCTGCAGCGGTTTCTTCAATCTCCGATCATCCTCCTCC
TCCTCCTCTAATGGTTGCGGAGGAAAGCTTAATTGGGTGGCTATGTCGTT
CATCAACGGTGTAACCATGGCATTTTTTGCATCTTTGAACCGTTGTTCTT
GCATCCGCATAGCCACTGAAGAAGAAGACGGAGACGGAGACGATGCTAAC
CCGTTGATGTTCAACGATGGTAATCTCCGCCACGATGGTGTCGATTCAGT
TACTGCAACCACCAGCAGGAGAAGGAACGGTAAAGGAAAGAAAAATGGTA
AGTGATATACTATATAATCAGACTTTTTTAGAATTCTGCTTAATACAAAG
CTTGTGTTAATTTTGGAGATCAAAAATGAGTGTTCATCAATTAATTGAGA
AGCTGTAATCTTCTTCCTTTGATATATATATATACAGATAAATAAATATG
AAGAATGGTTCATGTG
back to top