GR408315

EST Overview


Name	GR408315
Unique Name	GR408315
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	628

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_ARATH (Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 2.092e-84
Identity = 140/192 (72.92%), Postives = 159/192 (82.81%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KS EV  +P D               ATSWDNQVRCWE++R+G ++A+ PKASI+HD PVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMH+ PI  +AWIP MNLL TGSWD+T+K+WDTRQ NPVHTQQLP++CY ++VKHPLMVVGTADRNLIV+NLQNPQ EFKRI SPLKYQTRCV AFP
Sbjct:   16 KSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFP 207

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAEL1_PONAB (mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.031e-48
Identity = 100/196 (51.02%), Postives = 119/196 (60.71%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K I WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_HUMAN (mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.031e-48
Identity = 100/196 (51.02%), Postives = 119/196 (60.71%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K I WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAEL1_PIG (mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.566e-47
Identity = 100/196 (51.02%), Postives = 119/196 (60.71%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K I WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_RAT (mRNA export factor OS=Rattus norvegicus GN=Rae1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.566e-47
Identity = 100/196 (51.02%), Postives = 119/196 (60.71%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K I WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_MOUSE (mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.566e-47
Identity = 100/196 (51.02%), Postives = 119/196 (60.71%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K I WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_BOVIN (mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.046e-47
Identity = 99/196 (50.51%), Postives = 119/196 (60.71%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K + WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_XENTR (mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.672e-47
Identity = 93/167 (55.69%), Postives = 112/167 (67.07%), Query Frame = 3

Query:  129 ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            A SW N VRCWEV  NG    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAPIK + W+  P  + ++TGSWD+++KFWDTR  NP+ T QLPERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   59 AGSWANDVRCWEVQDNG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_MACFA (mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.954e-46
Identity = 99/196 (50.51%), Postives = 117/196 (59.69%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXX---ATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            K IEV  +P D                  A SW N VRCWEV  +G    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A HDAP+K I WI  P  + ++TGSWD+T+KFWDTR SNP+   QLPER Y   V +P+ VV TA R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. SwissProt
Match: RAE1L_DANRE (mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.039e-46
Identity = 90/165 (54.55%), Postives = 110/165 (66.67%), Query Frame = 3

Query:  135 SWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWI--PEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAF 623
            SW N VRCWEV  NG    T+PKA   H  PVL   W DDG+ VF+  CDK  KMW L S  Q I +A H+ PI+ I WI  P  + ++TGSWD+T+KFWDTR  NP+ + Q+PERCY   V +P+ VV TA+R LIVY L+N   EF+RI SPLK+Q RCVA F
Sbjct:   61 SWANDVRCWEVQDNG---QTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221

[Close]

BLAST of GR408315 vs. TrEMBL
Match: C6T3L8_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 8.363e-94
Identity = 163/198 (82.32%), Postives = 171/198 (86.36%), Query Frame = 3

Query:   12 MSNFLSXXXXXXXKSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQT 605
            MSNFLS       KS EVNQ PTD               ATSWDNQVRCWEVA+NGVNVAT+PKASI HDHPVLCS WKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIKE+AWIPEMNLLVTGSWD+T+K+WDTRQSNPVHTQQLPERCYAM V+HPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQT
Sbjct:    1 MSNFLSNTNPNPNKSFEVNQPPTDSVSSLSFSPKANFLVATSWDNQVRCWEVAQNGVNVATVPKASITHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEMNLLVTGSWDKTLKYWDTRQSNPVHTQQLPERCYAMTVRHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQT 198

[Close]

BLAST of GR408315 vs. TrEMBL
Match: D7TZH1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017573001 PE=4 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 9.569e-90
Identity = 156/205 (76.10%), Postives = 169/205 (82.44%), Query Frame = 3

Query:   12 MSNFLSXXXXXXXKSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            MSNF S       KSIEV Q PTD               ATSWDNQVRCWE+ R+G    ++PKASI+HD PVLCSAWKDDGT VFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIKE+AW+PEMNLLVTGSWD+TIK+WDTRQSNPVHTQQLP+RCYA  V+HPLMVVGTADRNLIV+NLQNPQ EFKRI SPLKYQTRCVAAFP
Sbjct:    1 MSNF-SAANPNPNKSIEVAQPPTDSVSSLKFSPKANFLVATSWDNQVRCWEITRDGATTGSVPKASISHDQPVLCSAWKDDGTIVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWVPEMNLLVTGSWDKTIKYWDTRQSNPVHTQQLPDRCYAFTVRHPLMVVGTADRNLIVFNLQNPQTEFKRITSPLKYQTRCVAAFP 204

[Close]

BLAST of GR408315 vs. TrEMBL
Match: D7STD2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_55.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029758001 PE=4 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.749e-89
Identity = 156/208 (75.00%), Postives = 170/208 (81.73%), Query Frame = 3

Query:   12 MSNFLSXXXXXXX---KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            MSNF S          KSIEV Q P+D               ATSWDNQVRCWE+ RNG  V ++PKASI+HD PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIKE+AWIPEMNLL TGSWD+T+K+WDTRQ NPVHTQQLP+RCYA+ V+HPLMVVGTADRNLIV+NLQNPQ EFKRI SPLKYQTRCVAAFP
Sbjct:    1 MSNFSSITTASNPNPNKSIEVAQPPSDSVSSLSFSPKANILVATSWDNQVRCWEIMRNGPTVGSVPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFNLQNPQTEFKRITSPLKYQTRCVAAFP 208

[Close]

BLAST of GR408315 vs. TrEMBL
Match: B9SMV1_RICCO (Plant poly(A)+ RNA export protein, putative OS=Ricinus communis GN=RCOM_0471040 PE=4 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.858e-88
Identity = 148/192 (77.08%), Postives = 163/192 (84.90%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KSIEV+Q P+D               ATSWDNQVRCWE+ RNG  + ++PK  I HD PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIKEIAWIPEMNLL TGSWD+T+K+WDTRQSNPVHTQQLP+RCYAM V++PLMVVGTADRNLIV+NLQ PQ E+KRI SPLKYQTRCVAAFP
Sbjct:   16 KSIEVSQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEITRNGTTIGSVPKTQITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEIAWIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYAMTVRYPLMVVGTADRNLIVFNLQQPQTEYKRITSPLKYQTRCVAAFP 207

[Close]

BLAST of GR408315 vs. TrEMBL
Match: C6TCY4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.293e-86
Identity = 151/205 (73.66%), Postives = 167/205 (81.46%), Query Frame = 3

Query:   12 MSNFLSXXXXXXXKSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            MS F +       KS EV Q P+D               ATSWDNQVRCWE+ RNG  V + PKASI+HD PVLCSAWKDDGTTVFSGGCDKQVKMWPL+SGGQP+TVAMHDAP+K+IAWI EMNLL TGSWD+T+K+WDTRQSNPVHTQQLP+RCYA+ VKHPLMVVGTADRNLIV+NLQNPQ E+KRIVSPLKYQTR VAAFP
Sbjct:    1 MSTFGAAANTNPNKSYEVAQPPSDSISSICFSPKANFLVATSWDNQVRCWEITRNGTVVNSTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLMSGGQPMTVAMHDAPVKDIAWISEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYAITVKHPLMVVGTADRNLIVFNLQNPQTEYKRIVSPLKYQTRSVAAFP 205

[Close]

BLAST of GR408315 vs. TrEMBL
Match: B9H0B7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817569 PE=4 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 8.383e-86
Identity = 146/192 (76.04%), Postives = 162/192 (84.38%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KSIEV+  P+D               ATSWDNQVRCWE+ RNG NV ++ KASI+HD PVLCS WKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIKEIAWIPEMN L TGSWD+T+K+WD RQ+NPVHTQQL ERCYAM V++PLMVVGTADRN+IVYNLQ+PQ EFK+I SPLKYQTRCVAAFP
Sbjct:   16 KSIEVSHPPSDSVSSLSFSPKANFLVATSWDNQVRCWEITRNGTNVGSVAKASISHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEIAWIPEMNCLATGSWDKTLKYWDLRQANPVHTQQLGERCYAMTVRYPLMVVGTADRNMIVYNLQSPQTEFKKIASPLKYQTRCVAAFP 207

[Close]

BLAST of GR408315 vs. TrEMBL
Match: C6TH94_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.095e-85
Identity = 149/205 (72.68%), Postives = 167/205 (81.46%), Query Frame = 3

Query:   12 MSNFLSXXXXXXXKSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            MS F +       KS EV Q P+D               ATSWDNQVRCWE+ RNG  V + PKASI+H+ PVLCSAWKDDGTTVFSGGCDKQVKMWPL SGGQP+TVAMHDAP+K+IAWIPEMNLL +GSWD+T+K+WDTRQSNPVHTQQLP+RCYA+ VKHPLMVVGTADRNLIV+NLQ+PQ E+KRIVSPLKYQTR VAAFP
Sbjct:    1 MSTFGAAANTNPNKSYEVAQPPSDSISSLCFSPKANFLVATSWDNQVRCWEITRNGTVVNSTPKASISHEQPVLCSAWKDDGTTVFSGGCDKQVKMWPLTSGGQPMTVAMHDAPVKDIAWIPEMNLLASGSWDKTLKYWDTRQSNPVHTQQLPDRCYAITVKHPLMVVGTADRNLIVFNLQSPQTEYKRIVSPLKYQTRSVAAFP 205

[Close]

BLAST of GR408315 vs. TrEMBL
Match: D7KX32_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477180 PE=4 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 4.600e-84
Identity = 142/192 (73.96%), Postives = 160/192 (83.33%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KS EV  +P D               ATSWDNQVRCWE++R+G ++A+ PKASI+HD PVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMHDAPI  +AWIP MNLL TGSWD+T+K+WDTRQ NPVHTQQLP++CY ++VKHPLMVVGTADRNLIV+NLQNPQ EFKRI SPLKYQTRCV AFP
Sbjct:   16 KSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIAAMAWIPGMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFP 207

[Close]

BLAST of GR408315 vs. TrEMBL
Match: B9GMC9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814858 PE=4 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.338e-83
Identity = 142/192 (73.96%), Postives = 160/192 (83.33%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KSIEV Q P+D               ATSWDNQVRCWE+ RNG  V ++PKASI+HD PVLCS+WKDDGTTVFSGGCDKQVKMWPLLSGGQP+T+AMHDAPIKEI WIPEMN L T S+D+T+K+WD RQS PVHTQQL ERCYAM V++PLMVVGTADRN++VYNLQNPQ EFK+I SPLKYQTRC+AAFP
Sbjct:   16 KSIEVLQPPSDSVSSLSFSPKANFLVATSWDNQVRCWEITRNGTTVGSVPKASISHDQPVLCSSWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTIAMHDAPIKEITWIPEMNCLATASFDKTLKYWDLRQSTPVHTQQLGERCYAMTVRYPLMVVGTADRNMVVYNLQNPQTEFKKIPSPLKYQTRCIAAFP 207

[Close]

BLAST of GR408315 vs. TrEMBL
Match: Q1LYY5_ARATH (At1g80670 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.982e-83
Identity = 140/192 (72.92%), Postives = 159/192 (82.81%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KS EV  +P D               ATSWDNQVRCWE++R+G ++A+ PKASI+HD PVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMH+ PI  +AWIP MNLL TGSWD+T+K+WDTRQ NPVHTQQLP++CY ++VKHPLMVVGTADRNLIV+NLQNPQ EFKRI SPLKYQTRCV AFP
Sbjct:   16 KSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFP 207

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT1G80670.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349)

HSP 1 Score: 311.612 bits (797), Expect = 2.163e-85
Identity = 140/192 (72.92%), Postives = 159/192 (82.81%), Query Frame = 3

Query:   51 KSIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            KS EV  +P D               ATSWDNQVRCWE++R+G ++A+ PKASI+HD PVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMH+ PI  +AWIP MNLL TGSWD+T+K+WDTRQ NPVHTQQLP++CY ++VKHPLMVVGTADRNLIV+NLQNPQ EFKRI SPLKYQTRCV AFP
Sbjct:   16 KSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFP 207

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT1G15850.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:5453245-5454088 REVERSE LENGTH=140)

HSP 1 Score: 172.555 bits (436), Expect = 1.568e-43
Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = 3

Query:   54 SIEVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIK 422
            S E+    TD               ATSWD QVRCWE+ R+  ++A+ PK S++HD PVLCSAWKDDGTTVF+GGCDKQ KMWPLLSG QP TVAMHDAP  +IAWIP MNLLVTGSWD+T+K
Sbjct:   18 SYEITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT3G19590.1 (| Symbols: BUB3.1 | Transducin/WD40 repeat-like superfamily protein | chr3:6805798-6808374 FORWARD LENGTH=340)

HSP 1 Score: 94.3597 bits (233), Expect = 5.428e-20
Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 3

Query:   60 EVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTR-QSNPVHTQQ----LPERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            E++  P+D                +SWD +VR ++V+ N +      K    H   VL   + DD +  FS G D +V+      G + I +  HD  ++ + +      ++TGSWD+T+K WD R  S P  TQ      PER Y+M++    +VV TA R++ +Y+L+N     +R  S LKYQTRCV  +P
Sbjct:   11 ELSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSL------KGEFLHGGAVLDCCFHDDFSG-FSVGADYKVRRIVFNVGKEDI-LGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYP 196

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT1G49910.1 (| Symbols: BUB3.2 | Transducin/WD40 repeat-like superfamily protein | chr1:18479025-18481271 FORWARD LENGTH=339)

HSP 1 Score: 85.1149 bits (209), Expect = 3.293e-17
Identity = 56/194 (28.87%), Postives = 95/194 (48.97%), Query Frame = 3

Query:   60 EVNQTPTDXXXXXXXXXXXXXXXATSWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQL-----PERCYAMAVKHPLMVVGTADRNLIVYNLQNPQVEFKRIVSPLKYQTRCVAAFP 626
            E++  P+D                +SWD  VR ++   NG     + +    H   VL   + DD +  FS   D +V+     +G + + +  H+ P++ + +      ++TGSWD+TIK WD R ++     Q+     PER  ++++    +VV TA R++ +Y+L+N     +R  S LKYQTRCV  +P
Sbjct:   10 ELSNPPSDGISNLRFSNNSDHLLVSSWDKSVRLYDA--NG----DLMRGEFKHGGAVLDCCFHDDSSG-FSVCADTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYP 195

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT1G11160.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:3733406-3739363 FORWARD LENGTH=1021)

HSP 1 Score: 61.2326 bits (147), Expect = 5.092e-10
Identity = 41/124 (33.06%), Postives = 57/124 (45.97%), Query Frame = 3

Query:  135 SWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVK-HP 503
            S D  +R W+  + G  + T       H   +    +  DG  V SGG D  VK+W L +G        H+ PI+ + + P   LL TGS DRT+KFWD      + T + PE     A+  HP
Sbjct:  119 SSDTNLRVWDTRKKGC-IQTYK----GHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTR-PEATGVRAIAFHP 236

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT1G61210.2 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:22564785-22571555 FORWARD LENGTH=1179)

HSP 1 Score: 60.4622 bits (145), Expect = 8.686e-10
Identity = 39/124 (31.45%), Postives = 59/124 (47.58%), Query Frame = 3

Query:  135 SWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVK-HP 503
            S D  ++ W++ + G  + T       H   +    +  DG  V SGG D  VK+W L +G        H+ PI+ + + P   LL TGS DRT+KFWD      + + + PE     ++K HP
Sbjct:  119 SSDANLKIWDIRKKGC-IQTYK----GHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTR-PEATGVRSIKFHP 236

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT1G61210.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:22564785-22571555 FORWARD LENGTH=1181)

HSP 1 Score: 60.4622 bits (145), Expect = 8.686e-10
Identity = 39/124 (31.45%), Postives = 59/124 (47.58%), Query Frame = 3

Query:  135 SWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVK-HP 503
            S D  ++ W++ + G  + T       H   +    +  DG  V SGG D  VK+W L +G        H+ PI+ + + P   LL TGS DRT+KFWD      + + + PE     ++K HP
Sbjct:  119 SSDANLKIWDIRKKGC-IQTYK----GHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTR-PEATGVRSIKFHP 236

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT3G16650.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:5671133-5675106 FORWARD LENGTH=479)

HSP 1 Score: 58.151 bits (139), Expect = 4.311e-9
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 3

Query:  141 DNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWDTRQSNPVHTQQLPERCYAMAVKHP 503
            D QV+CW++ +N V      ++   H H V C A       V +GG D   ++W + +  Q I V  HD+ +  +   P    ++TGS D TIKFWD R    + T    ++       HP
Sbjct:  233 DKQVKCWDLEQNKVI-----RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ-IFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHP 347

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT5G23430.2 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:7894073-7899862 REVERSE LENGTH=836)

HSP 1 Score: 56.9954 bits (136), Expect = 9.603e-9
Identity = 34/99 (34.34%), Postives = 48/99 (48.48%), Query Frame = 3

Query:  135 SWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWD 431
            S D  ++ W++ + G  + T       H   V    +  DG  V SGG D  VK+W L +G        H+  I+ + + P   LL TGS DRT+KFWD
Sbjct:  120 SLDTNLKIWDIRKKGC-IHTYK----GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213

[Close]

BLAST of GR408315 vs. TAIR peptide
Match: AT5G23430.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:7894073-7899862 REVERSE LENGTH=837)

HSP 1 Score: 56.9954 bits (136), Expect = 9.603e-9
Identity = 34/99 (34.34%), Postives = 48/99 (48.48%), Query Frame = 3

Query:  135 SWDNQVRCWEVARNGVNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKEIAWIPEMNLLVTGSWDRTIKFWD 431
            S D  ++ W++ + G  + T       H   V    +  DG  V SGG D  VK+W L +G        H+  I+ + + P   LL TGS DRT+KFWD
Sbjct:  120 SLDTNLKIWDIRKKGC-IHTYK----GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213

The following BLAST results are available for this feature:

BLAST of GR408315 vs. SwissProt
BLAST of GR408315 vs. TrEMBL
BLAST of GR408315 vs. TAIR peptide

BLAST of GR408315 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RAE1L_ARATH	2.092e-84	72.92	Rae1-like protein At1g80670 OS=Arabidopsis thalian...	[more]
RAEL1_PONAB	7.031e-48	51.02	mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV...	[more]
RAE1L_HUMAN	7.031e-48	51.02	mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV...	[more]
RAEL1_PIG	1.566e-47	51.02	mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1	[more]
RAE1L_RAT	1.566e-47	51.02	mRNA export factor OS=Rattus norvegicus GN=Rae1 PE...	[more]
RAE1L_MOUSE	1.566e-47	51.02	mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV...	[more]
RAE1L_BOVIN	2.046e-47	50.51	mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1	[more]
RAE1L_XENTR	2.672e-47	55.69	mRNA export factor OS=Xenopus tropicalis GN=rae1 P...	[more]
RAE1L_MACFA	2.954e-46	50.51	mRNA export factor OS=Macaca fascicularis GN=RAE1 ...	[more]
RAE1L_DANRE	5.039e-46	54.55	mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=...	[more]

BLAST of GR408315 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T3L8_SOYBN	8.363e-94	82.32	Putative uncharacterized protein (Fragment) OS=Gly...	[more]
D7TZH1_VITVI	9.569e-90	76.10	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7STD2_VITVI	4.749e-89	75.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SMV1_RICCO	6.858e-88	77.08	Plant poly(A)+ RNA export protein, putative OS=Ric...	[more]
C6TCY4_SOYBN	1.293e-86	73.66	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9H0B7_POPTR	8.383e-86	76.04	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6TH94_SOYBN	1.095e-85	72.68	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7KX32_ARALY	4.600e-84	73.96	Transducin family protein OS=Arabidopsis lyrata su...	[more]
B9GMC9_POPTR	1.338e-83	73.96	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q1LYY5_ARATH	2.982e-83	72.92	At1g80670 OS=Arabidopsis thaliana PE=2 SV=1	[more]

BLAST of GR408315 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G80670.1	2.163e-85	72.92	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT1G15850.1	1.568e-43	63.41	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT3G19590.1	5.428e-20	32.47	\| Symbols: BUB3.1 \| Transducin/WD40 repeat-like su...	[more]
AT1G49910.1	3.293e-17	28.87	\| Symbols: BUB3.2 \| Transducin/WD40 repeat-like su...	[more]
AT1G11160.1	5.092e-10	33.06	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT1G61210.2	8.686e-10	31.45	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT1G61210.1	8.686e-10	31.45	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT3G16650.1	4.311e-9	30.58	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT5G23430.2	9.603e-9	34.34	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT5G23430.1	9.603e-9	34.34	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	no description	coord: 15..54 score: 1.2e-05coord: 58..101 score: 0.00095coord: 105..143 score: 1.4e-06coord: 146..182 score: 1.4
IPR011046	WD40 repeat-like-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 14..208 score: 1.1
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10	no description	coord: 11..189 score: 2.4
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 22..152 score: 27
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 130..144 score
IPR019781	WD40 repeat, subgroup	PFAM	PF00400	WD40	coord: 21..54 score: 2e-07coord: 70..100 score: 7.7e-07coord: 114..143 score: 5.9
IPR019782	WD40 repeat 2	PROFILE	PS50082	WD_REPEATS_2	coord: 22..55 score: 11.177coord: 69..110 score: 10.275coord: 111..152 score: 15
IPR020472	G-protein beta WD-40 repeat, region	PRINTS	PR00320	GPROTEINBRPT	coord: 41..55 score: 9.3e-06coord: 88..102 score: 9.3e-06coord: 130..144 score: 9.3
None	No IPR available	PANTHER	PTHR10971	MRNA EXPORT PROTEIN AND BUB3	coord: 14..207 score: 2.3e
None	No IPR available	PANTHER	PTHR10971:SF11	MRNA EXPORT PROTEIN	coord: 14..207 score: 2.3e
None	No IPR available	SEG	seg	seg	coord: 10..16 score: NAcoord: 28..42 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408315 ID=GR408315; Name=GR408315; organism=Cicer arietinum; type=EST; length=628bp
GGTTACTTCAAATGTCGAATTTCTTAAGCAATAACAATCCAAACCCTAAT
AAGTCCATTGAGGTGAATCAAACTCCAACCGATTCTGTTTCAAGTCTCAG
TTTCAGTCCCAATTCTAACTTACTCGTTGCAACTTCATGGGATAATCAGG
TTCGGTGTTGGGAGGTAGCACGGAATGGAGTAAATGTTGCTACTATGCCC
AAAGCTTCTATAGCGCATGATCATCCGGTTTTGTGCTCTGCTTGGAAGGA
TGATGGAACGACTGTGTTCTCTGGTGGATGTGACAAGCAAGTGAAAATGT
GGCCTCTGTTGTCTGGAGGACAACCAATTACTGTAGCTATGCATGATGCA
CCCATCAAAGAGATTGCTTGGATTCCTGAGATGAACCTTTTAGTCACAGG
AAGCTGGGACAGAACTATAAAGTTTTGGGATACAAGGCAGTCAAATCCAG
TGCACACGCAACAACTCCCAGAGCGCTGCTATGCAATGGCAGTCAAACAT
CCTCTGATGGTTGTTGGCACTGCTGATAGAAATCTTATTGTTTACAACTT
GCAAAATCCTCAGGTTGAATTCAAGAGAATTGTTTCACCCTTAAAGTATC
AGACAAGGTGCGTTGCTGCATTCCCTGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_rpt
IPR011046	WD40 repeat-like-containing domain
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR019781	WD40 repeat, subgroup
IPR019782	WD40 repeat 2
IPR020472	G-protein_beta_WD-40_rep

Search form