GR409154

EST Overview
NameGR409154
Unique NameGR409154
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length658
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR409154 vs. TrEMBL
Match: Q1STQ6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC136139g5v2 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.218e-10
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = -2
Query:  250 LQGAECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQ 420
            L   E + PLGI+ GML V+G A +Y+H+   GRPKH G DLWD   E  DKKLVDQ
Sbjct:    3 LHWLEAMLPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDLWDVAMERRDKKLVDQ 59          
BLAST of GR409154 vs. TrEMBL
Match: D7UBK7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_103.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010904001 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.428e-10
Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = -2
Query:  238 PLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFAA 396
            PLGI+ GML V+G A FY+HK   GRPKH G DLWD   E  DKKLV+   AA
Sbjct:   11 PLGIIAGMLCVMGNAQFYIHKAAHGRPKHVGNDLWDVAMERRDKKLVESSSAA 63          
BLAST of GR409154 vs. TrEMBL
Match: B6TSJ6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.101e-9
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = -2
Query:  250 LQGAECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQ 420
            L   E V PLGI+ GML ++G A +++HK   GRPKH G D+WD   E  DKKLV+Q
Sbjct:    4 LHSLEAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKLVEQ 60          
BLAST of GR409154 vs. TrEMBL
Match: B9T0P0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0126310 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.878e-9
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = -2
Query:  232 ECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFA-APN 408
            E   PLGI+ GML V+G A +Y+H+   GRPKH G D+WD   E  DKKLV+ + A +PN
Sbjct:    7 EAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENLSAPSPN 66          
BLAST of GR409154 vs. TrEMBL
Match: B6SP36_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.878e-9
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = -2
Query:  250 LQGAECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQ 420
            L   E V PLGI+ GML ++G A +++HK   GRPKH G D+WD   E  DKKLV+Q
Sbjct:    4 LHWLEAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKLVEQ 60          
BLAST of GR409154 vs. TrEMBL
Match: C5YZU8_SORBI (Putative uncharacterized protein Sb09g023650 OS=Sorghum bicolor GN=Sb09g023650 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 4.183e-9
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = -2
Query:  250 LQGAECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQ 420
            L   E V PLGI+ GML ++G A +++HK   GRPKH G D+WD   E  DKKL++Q
Sbjct:    4 LHWLEAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKLMEQ 60          
BLAST of GR409154 vs. TrEMBL
Match: Q9C9Z5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At3g08610 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.889e-8
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = -2
Query:  232 ECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFAAPN 408
            E + PLGI+ GML ++G + +Y+HK   GRPKH G D WD   E  DKK+V++  AAP+
Sbjct:    7 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA-AAPS 64          
BLAST of GR409154 vs. TrEMBL
Match: Q84MD9_ARATH (At3g08610 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.889e-8
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = -2
Query:  232 ECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFAAPN 408
            E + PLGI+ GML ++G + +Y+HK   GRPKH G D WD   E  DKK+V++  AAP+
Sbjct:   15 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA-AAPS 72          
BLAST of GR409154 vs. TrEMBL
Match: D7L761_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478162 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.757e-7
Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = -2
Query:  241 ECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFA 408
            E + PLGI+ GML ++G + +Y+HK   GRPKH G D WD   E  DKK+V++  A
Sbjct:    7 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKAGA 62          
BLAST of GR409154 vs. TrEMBL
Match: Q5KQI2_ORYSJ (Os05g0481600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0095J22.8 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 8.722e-7
Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = -2
Query:  232 LQGAECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFAAPN 420
            L   E + PLGI+ GML ++G A +Y+H+   GRPKH G D WD      DK L+ Q  +  N
Sbjct:    4 LHWLEAMLPLGIIGGMLCIMGNAQYYIHRAAHGRPKHIGNDNWDMAMARRDKVLLHQASSENN 66          
BLAST of GR409154 vs. TAIR peptide
Match: AT3G08610.1 (| Symbols: | unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2616435-2616768 REVERSE LENGTH=65)

HSP 1 Score: 61.2326 bits (147), Expect = 5.592e-10
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = -2
Query:  232 ECVRPLGIMVGMLWVLGRAPFYVHKFVLGRPKHFGTDLWDSPREGGDKKLVDQVFAAPN 408
            E + PLGI+ GML ++G + +Y+HK   GRPKH G D WD   E  DKK+V++  AAP+
Sbjct:    7 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA-AAPS 64          
The following BLAST results are available for this feature:
BLAST of GR409154 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q1STQ6_MEDTR2.218e-1056.14Putative uncharacterized protein OS=Medicago trunc... [more]
D7UBK7_VITVI8.428e-1060.38Whole genome shotgun sequence of line PN40024, sca... [more]
B6TSJ6_MAIZE1.101e-952.63Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
B9T0P0_RICCO1.878e-951.67Putative uncharacterized protein OS=Ricinus commun... [more]
B6SP36_MAIZE1.878e-952.63Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
C5YZU8_SORBI4.183e-950.88Putative uncharacterized protein Sb09g023650 OS=So... [more]
Q9C9Z5_ARATH7.889e-849.15Putative uncharacterized protein OS=Arabidopsis th... [more]
Q84MD9_ARATH7.889e-849.15At3g08610 OS=Arabidopsis thaliana PE=4 SV=1[more]
D7L761_ARALY1.757e-748.21Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q5KQI2_ORYSJ8.722e-742.86Os05g0481600 protein OS=Oryza sativa subsp. japoni... [more]
back to top
BLAST of GR409154 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G08610.15.592e-1049.15| Symbols: | unknown protein; Has 40 Blast hits t... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 108..137
score
NoneNo IPR availableSEGsegsegcoord: 31..44
score: NAcoord: 48..64
score
NoneNo IPR availableSEGsegsegcoord: 47..63
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409154 ID=GR409154; Name=GR409154; organism=Cicer arietinum; type=EST; length=658bp
GGCCAACACCCCAAAAAGATCACATTAAGGCCATTTCACCGCGTTCAACT
AACAGAAAAAAATTGATTAAAGCAAAGGAAAATGACAAAGCTTATGTCAA
ACCCCCGACCACAAAACACATGGAAAATAAATTGAAACAAACTACCCCGC
TTCCTTGGAACAGCTCAAGAGCATCAAATAAACAATTTAGTCCCTTCACA
AGCACGATGATAAAACAGCCTGACTGAAGTAATTTGGGGCGGCAAAAACT
TGATCGACGAGCTTCTTGTCCCCTCCCTCCCTGGGCGAGTCCCACAAATC
GGTGCCGAAGTGCTTAGGGCGGCCGAGAACAAATTTGTGGACGTAAAACG
GAGCCCTTCCCAAAACCCAAAGCATTCCAACCATAATTCCAAGAGGTCGC
ACACATTCCGCGCCCTGCAACGGCCAGCCTTCAACCCTCCGTCCTTCACA
ACCACCCTCCCCCCGGATACCACTGCCCAACACACATCCAAGCCTCACCT
CCCCGCCCCCCAAACCACTAAAAAAAAGCTCTACCCCCCGCAAAATCCAC
ACCCAAATTCTCCAACTCCGACCCCCCAGCCCCAACAACTTCTGCTCACC
CCCACGACCCCCCCTTCACCACACATCTTACGCCCCACAATGCCCCCACC
CCCACAGC
back to top