GR915178
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR915178 vs. SwissProt
Match: GOGC2_ARATH (Golgin candidate 2 OS=Arabidopsis thaliana GN=GC2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.924e-19 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 2 Query: 26 QWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASRNQL-ASKGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 Q LE ++ +VA L+Q++ KES EEL+R+ N + QL S+G +FE ++LEAE S + DK+ +LQ+KA K+EADIEM RK LKRRL+Q+TDHLI Sbjct: 415 QKKLETQIDQVAVLKQQVELKESTLEELKRNTFNIGGRGTTLKQLDTSRGDKFEHQMLEAEISLLTDKIGRLQDKATKLEADIEMMRKELEEPTEVEIELKRRLNQLTDHLI 526
BLAST of GR915178 vs. TrEMBL
Match: Q1SMZ3_MEDTR (Prefoldin (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC139526g40v2 PE=4 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.144e-44 Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 2 Query: 23 VQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASRNQLASKGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 VQWNLEVEVK+VA+LRQK+ASKESVHEELRRS+RNP+QT ASRNQLASKGVEFEREILEAEHSFINDKVAQLQEKARK+EADIEMTRK LKRRLHQMTDHLI Sbjct: 13 VQWNLEVEVKQVAELRQKMASKESVHEELRRSLRNPNQTGASRNQLASKGVEFEREILEAEHSFINDKVAQLQEKARKLEADIEMTRKEIEEPTEVEVELKRRLHQMTDHLI 124
BLAST of GR915178 vs. TrEMBL
Match: B9IEB1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1101000 PE=4 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.961e-21 Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASRNQ-LASKGVEFEREILEAEHSFINDKVAQLQEK-------------------ARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A Q NLE+E+ +VA+LRQ+ KE E+LRR I HQTE NQ ASKGV+FEREILE E+ F+ DK+ +L++K A+K+E DIEMTRK LKRRL Q+TDHLI Sbjct: 298 ATAQKNLELEINQVAELRQQFELKEVALEDLRRRISKTHQTETYLNQAAASKGVQFEREILETEYLFLIDKIQRLEDKLIHSHARLLTCISFTCLFQAKKLETDIEMTRKEMEDPTEVEIELKRRLGQLTDHLI 431
BLAST of GR915178 vs. TrEMBL
Match: B9T2M3_RICCO (Golgin-84, putative OS=Ricinus communis GN=RCOM_0171060 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.840e-18 Identity = 57/114 (50.00%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASRNQLASKGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A Q NLE+E VA+LRQ+ KE E ASKGVEFEREILEAE+SF+ DK+A L++KA+K+E DIEMTRK LKRRL Q+TDHLI Sbjct: 463 ATAQKNLEMENNRVAELRQQFELKEVTSE-------------------ASKGVEFEREILEAEYSFLTDKIAVLEDKAKKLEEDIEMTRKDIEDPTEVEIELKRRLAQLTDHLI 557
BLAST of GR915178 vs. TrEMBL
Match: D7SJ97_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008417001 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.132e-18 Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 104 ELRRSIRNPHQTEASRNQL-ASKGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 E RR I N HQ S + L A+KGVEFE+EILEAE+SFI DK+ LQ+KA+K+EA+IEMTRK LKRRL Q+TDHLI Sbjct: 42 EQRRRIPNAHQMGTSLSHLVAAKGVEFEKEILEAEYSFITDKIGWLQDKAKKLEANIEMTRKEMESPTVVEVELKRRLFQLTDHLI 127
BLAST of GR915178 vs. TrEMBL
Match: C5Y9F5_SORBI (Putative uncharacterized protein Sb06g031010 OS=Sorghum bicolor GN=Sb06g031010 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.690e-14 Identity = 44/116 (37.93%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASR-NQLAS-KGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A QWNLEV+V +VA+LR+++ K+ ++ RR + +T A +++ S + + E EI++AE++ DK+ L++KARK+E IE+TR+ LK+RL Q+TD LI Sbjct: 37 AREQWNLEVQVDQVAQLREEVELKKLAQDKYRRKLAKIQKTSAPPVDEIESLRRFKLEEEIIDAEYALTCDKIVSLKDKARKIEESIELTRRDMVHPTEVEIELKKRLDQLTDRLI 152
BLAST of GR915178 vs. TrEMBL
Match: C0PG71_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.045e-13 Identity = 43/116 (37.07%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASR-NQLAS-KGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A QWNLEV+V +VA+LR+++ K+ ++ RR + +T A +++ S + + E EI++AE++ D++ L++KARK+E IE+TR+ LK+RL Q+TD LI Sbjct: 253 AREQWNLEVQVDQVAQLREEVELKKLAQDKYRRKLTKIQKTSAPPVDEIESLRRFKLEEEIIDAEYTLTCDRIVSLKDKARKIEESIELTRRDMVHPTEVEIELKKRLDQLTDRLI 368
BLAST of GR915178 vs. TrEMBL
Match: B6UB09_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.045e-13 Identity = 43/116 (37.07%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASR-NQLAS-KGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A QWNLEV+V +VA+LR+++ K+ ++ RR + +T A +++ S + + E EI++AE++ D++ L++KARK+E IE+TR+ LK+RL Q+TD LI Sbjct: 253 AREQWNLEVQVDQVAQLREEVELKKLAQDKYRRKLTKIQKTSAPPVDEIESLRRFKLEEEIIDAEYTLTCDRIVSLKDKARKIEESIELTRRDMVHPTEVEIELKKRLDQLTDRLI 368
BLAST of GR915178 vs. TrEMBL
Match: B8AVN3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17709 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.779e-12 Identity = 38/116 (32.76%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASR-NQLAS-KGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A QWNL+++V +VA+LR+++ K ++ +R I +T N++ S + + E E+++AE++ D++ L++KARK++ +IE+T++ LK+RL Q+TD LI Sbjct: 253 AREQWNLDLQVDQVAQLREEVDMKTLTQDKYKRKIAKMQKTSPPLVNEIESLRRFKLEEEMIDAEYALTCDRIVNLKDKARKIKENIELTKRRMVHPTEVEIELKKRLDQLTDRLI 368
BLAST of GR915178 vs. TrEMBL
Match: B9FQF7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22320 PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.277e-11 Identity = 38/116 (32.76%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASR-NQLAS-KGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A QWNL+++V +VA+LR+++ K ++ +R I +T N++ S + + E E+++AE++ D++ L++KARK++ +IE+T++ LK+RL Q+TD LI Sbjct: 359 AREQWNLDLQVDQVAQLREEVDMKTLTQDKYKRKIAKMQKTSPLLVNEIESLRRFKLEEEMIDAEYALTCDRIVNLKDKARKIKENIELTKRRMVHPTEVEIELKKRLDQLTDRLI 474
BLAST of GR915178 vs. TrEMBL
Match: Q00RP2_ORYSA (OSIGBa0113E10.14 protein OS=Oryza sativa GN=OSIGBa0113E10.14 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.726e-8 Identity = 38/133 (28.57%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 17 AEVQWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASR-NQLAS-KGVEFEREILEAEHSFINDKVAQLQEK-----------------ARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 A QWNL+++V +VA+LR+++ K ++ +R I +T N++ S + + E E+++AE++ D++ L++K ARK++ +IE+T++ LK+RL Q+TD LI Sbjct: 253 AREQWNLDLQVDQVAQLREEVDMKTLTQDKYKRKIAKMQKTSPPLVNEIESLRRFKLEEEMIDAEYALTCDRIVNLKDKDLSFFVLLVIIVLCLSMARKIKENIELTKRRMVHPTEVEIELKKRLDQLTDRLI 385
BLAST of GR915178 vs. TAIR peptide
Match: AT1G18190.1 (| Symbols: GC2 | golgin candidate 2 | chr1:6257963-6261325 REVERSE LENGTH=668) HSP 1 Score: 92.0485 bits (227), Expect = 7.918e-20 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 2 Query: 26 QWNLEVEVKEVAKLRQKIASKESVHEELRRSIRNPHQTEASRNQL-ASKGVEFEREILEAEHSFINDKVAQLQEKARKMEADIEMTRKXXXXXXXXXXXLKRRLHQMTDHLI 358 Q LE ++ +VA L+Q++ KES EEL+R+ N + QL S+G +FE ++LEAE S + DK+ +LQ+KA K+EADIEM RK LKRRL+Q+TDHLI Sbjct: 415 QKKLETQIDQVAVLKQQVELKESTLEELKRNTFNIGGRGTTLKQLDTSRGDKFEHQMLEAEISLLTDKIGRLQDKATKLEADIEMMRKELEEPTEVEIELKRRLNQLTDHLI 526 The following BLAST results are available for this feature:
BLAST of GR915178 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR915178 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR915178 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR915178 ID=GR915178; Name=GR915178; organism=Cicer arietinum; type=EST; length=359bpback to top |