GR916290

EST Overview


Name	GR916290
Unique Name	GR916290
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	358

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR916290 vs. SwissProt
Match: CD029_RAT (Uncharacterized protein C4orf29 homolog OS=Rattus norvegicus PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.104e-12
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = -3

Query:  168 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDR 356
            P +P+ +I+V A +D YIP+  V  LQ+ WPG E+R++ GGH+S++L   G FR+AI D  +R
Sbjct:  395 PVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEIRYLEGGHISAYLFKQGLFRQAIYDAFER 457

[Close]

BLAST of GR916290 vs. SwissProt
Match: CD029_MOUSE (Uncharacterized protein C4orf29 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.104e-12
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = -3

Query:  168 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDR 356
            P +P+ +I+V A +D YIP+  V  LQ+ WPG E+R++ GGH+S++L   G FR+AI D  +R
Sbjct:  395 PVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEIRYLEGGHISAYLFKQGLFRQAIYDAFER 457

[Close]

BLAST of GR916290 vs. SwissProt
Match: CD029_HUMAN (Uncharacterized protein C4orf29 OS=Homo sapiens GN=C4orf29 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.452e-10
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = -3

Query:  195 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFR 356
            P +P+ +I+V A +D YIP+  V  LQ+ WPG E+R++ GGH+S++L   G FR
Sbjct:  361 PVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEIRYLEGGHISAYLFKQGLFR 414

[Close]

BLAST of GR916290 vs. TrEMBL
Match: A7UQU0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC157891g33v2 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.408e-34
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = -3

Query:  144 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKESPL 356
            PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES L
Sbjct:  290 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKESSL 360

[Close]

BLAST of GR916290 vs. TrEMBL
Match: D7TI36_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033369001 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.033e-33
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = -3

Query:  147 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKESP 356
            PKNPNAVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHNGEFRRAIVDGLDRL WKESP
Sbjct:  244 PKNPNAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNGEFRRAIVDGLDRLQWKESP 313

[Close]

BLAST of GR916290 vs. TrEMBL
Match: A5BLQ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030682 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.033e-33
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = -3

Query:  147 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKESP 356
            PKNPNAVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHNGEFRRAIVDGLDRL WKESP
Sbjct:  289 PKNPNAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNGEFRRAIVDGLDRLQWKESP 358

[Close]

BLAST of GR916290 vs. TrEMBL
Match: B9N6W7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837355 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.835e-32
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = -3

Query:  144 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKESPL 356
            PKNPNAVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHN EFRRAIVDGL+RL WKE PL
Sbjct:  290 PKNPNAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNDEFRRAIVDGLNRLEWKEPPL 360

[Close]

BLAST of GR916290 vs. TrEMBL
Match: B9T2C8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0404950 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.543e-32
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNPNAVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFR+AIVDGL RL WKES
Sbjct:  173 PKNPNAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRKAIVDGLSRLEWKES 241

[Close]

BLAST of GR916290 vs. TrEMBL
Match: Q9LH51_ARATH (Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.246e-31
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNP+AVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVDGLDRL WKES
Sbjct:  266 PKNPDAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLDRLDWKES 334

[Close]

BLAST of GR916290 vs. TrEMBL
Match: Q9C7D8_ARATH (Putative uncharacterized protein F28J15.20 OS=Arabidopsis thaliana GN=F28J15.20 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.246e-31
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNP+AVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVDGLDRL WKES
Sbjct:  291 PKNPDAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLDRLDWKES 359

[Close]

BLAST of GR916290 vs. TrEMBL
Match: Q9C7C5_ARATH (Putative uncharacterized protein T21B14.3 OS=Arabidopsis thaliana GN=T21B14.3 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.246e-31
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNP+AVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVDGLDRL WKES
Sbjct:  306 PKNPDAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLDRLDWKES 374

[Close]

BLAST of GR916290 vs. TrEMBL
Match: Q8RWA3_ARATH (At3g12156 OS=Arabidopsis thaliana GN=At3g12150 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.246e-31
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNP+AVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVDGLDRL WKES
Sbjct:  294 PKNPDAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLDRLDWKES 362

[Close]

BLAST of GR916290 vs. TrEMBL
Match: D7KZQ2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478575 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.240e-31
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNP+AVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHN EFRRAIVDGLDR+ WKES
Sbjct:  291 PKNPDAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNDEFRRAIVDGLDRVEWKES 359

[Close]

BLAST of GR916290 vs. TAIR peptide
Match: AT3G12150.1 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr3:3876688-3878621 REVERSE LENGTH=363)

HSP 1 Score: 137.887 bits (346), Expect = 1.219e-33
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = -3

Query:  150 PKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKES 356
            PKNP+AVI VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVDGLDRL WKES
Sbjct:  294 PKNPDAVIFVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLDRLDWKES 362

The following BLAST results are available for this feature:

BLAST of GR916290 vs. SwissProt
BLAST of GR916290 vs. TrEMBL
BLAST of GR916290 vs. TAIR peptide

BLAST of GR916290 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
CD029_RAT	3.104e-12	46.03	Uncharacterized protein C4orf29 homolog OS=Rattus ...	[more]
CD029_MOUSE	3.104e-12	46.03	Uncharacterized protein C4orf29 homolog OS=Mus mus...	[more]
CD029_HUMAN	8.452e-10	46.30	Uncharacterized protein C4orf29 OS=Homo sapiens GN...	[more]

BLAST of GR916290 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A7UQU0_MEDTR	1.408e-34	98.59	Putative uncharacterized protein OS=Medicago trunc...	[more]
D7TI36_VITVI	2.033e-33	95.71	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BLQ0_VITVI	2.033e-33	95.71	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9N6W7_POPTR	3.835e-32	92.96	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9T2C8_RICCO	8.543e-32	94.20	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q9LH51_ARATH	3.246e-31	92.75	Similarity to unknown protein OS=Arabidopsis thali...	[more]
Q9C7D8_ARATH	3.246e-31	92.75	Putative uncharacterized protein F28J15.20 OS=Arab...	[more]
Q9C7C5_ARATH	3.246e-31	92.75	Putative uncharacterized protein T21B14.3 OS=Arabi...	[more]
Q8RWA3_ARATH	3.246e-31	92.75	At3g12156 OS=Arabidopsis thaliana GN=At3g12150 PE=...	[more]
D7KZQ2_ARALY	4.240e-31	92.75	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GR916290 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G12150.1	1.219e-33	92.75	\| Symbols: \| unknown protein; CONTAINS InterPro D...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 58..68 score
None	No IPR available	GENE3D	3.40.50.1820	no description	coord: 7..63 score: 0.
None	No IPR available	PANTHER	PTHR13617	FAMILY NOT NAMED	coord: 1..70 score: 8.9
None	No IPR available	PANTHER	PTHR13617:SF1	SUBFAMILY NOT NAMED	coord: 1..70 score: 8.9
None	No IPR available	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 7..64 score: 2.3
IPR019149	Protein of unknown function DUF2048	PFAM	PF09752	DUF2048	coord: 1..63 score: 6.2

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR916290 ID=GR916290; Name=GR916290; organism=Cicer arietinum; type=EST; length=358bp
GATTTCGAGCGGGCCGCCCGGGCAGGTACAACCCCTTCCCTCTTCATTTG
GGGAACGAGTTCTATGATCAACTATGCATGTTACAAGCTTGAATGAACCA
CTGGATCAATCAACAGTATAAAATATCAACTGCAATTAAATCACAATGGA
GATTCTTTCCATGGTAATCTATCAAGGCCATCAACAATGGCCCTTCGAAA
CTCGCCATTATGGAGAAGGAAAGATGAGACGTGCCCGCCTGTCACCCATC
TTACCTCAGAACCTGGCCAAGCTTTCTGTAGTTCTAGGACTGAGTGTTTT
GGAATGTATCCATCATCAGTTGCAGCAACAAGGATTACAGCATTGGGGTT
TTTGGGAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR019149	ABHD18

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