HO062261

EST Overview


Name	HO062261
Unique Name	HO062261
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	667

Libraries


Library Name	Type
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO062261 vs. SwissProt
Match: ARI8_ARATH (Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 2.090e-14
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VT+NYFENLVRALENGL DV+S+ A  + S++
Sbjct:  487 GLTSVTKNYFENLVRALENGLSDVNSHDAYDRTSSS 522

HSP 2 Score: 46.2098 bits (108), Expect = 2.090e-14
Identity = 17/29 (58.62%), Postives = 19/29 (65.52%), Query Frame = -1

Query:  365 ADDNHWSCEQCTYANVRSATACQMCNQQR 451
            +D +HW CE CTY N RS T CQMC   R
Sbjct:  539 SDSSHWPCEYCTYVNPRSTTICQMCEHGR 567

HSP 3 Score: 21.9422 bits (45), Expect = 2.090e-14
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  479 NEFRTKLAGL 488

[Close]

BLAST of HO062261 vs. SwissProt
Match: ARI7_ARATH (Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana GN=ARI7 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 3.841e-8
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VT+NYFENLV+ALENGL DVDS+ A S +S +
Sbjct:  496 GLTSVTKNYFENLVKALENGLADVDSHAACSSKSTS 531

HSP 2 Score: 23.483 bits (49), Expect = 3.841e-8
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            NDFRTKLAG+
Sbjct:  488 NDFRTKLAGL 497

[Close]

BLAST of HO062261 vs. TrEMBL
Match: A5BJA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023021 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.013e-17
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS GA S+ +++
Sbjct:  495 GLTSVTRNYFENLVRALENGLSDVDSRGACSRTASS 530

HSP 2 Score: 55.0694 bits (131), Expect = 1.013e-17
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = -1

Query:  365 SSRMADDN-HWSCEQCTYANVRSATACQMCNQQR 463
            SSR  DD+ HWSCE CT+ANVRSAT CQ+C Q+R
Sbjct:  555 SSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 588

HSP 3 Score: 21.9422 bits (45), Expect = 1.013e-17
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  487 NEFRTKLAGL 496

[Close]

BLAST of HO062261 vs. TrEMBL
Match: D7U6I0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_207.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003757001 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.014e-17
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS GA S+ +++
Sbjct:  488 GLTSVTRNYFENLVRALENGLSDVDSRGACSRTASS 523

HSP 2 Score: 55.0694 bits (131), Expect = 1.014e-17
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = -1

Query:  365 SSRMADDN-HWSCEQCTYANVRSATACQMCNQQR 463
            SSR  DD+ HWSCE CT+ANVRSAT CQ+C Q+R
Sbjct:  548 SSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 581

HSP 3 Score: 21.9422 bits (45), Expect = 1.014e-17
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  480 NEFRTKLAGL 489

[Close]

BLAST of HO062261 vs. TrEMBL
Match: B9RM26_RICCO (Protein ariadne-1, putative OS=Ricinus communis GN=RCOM_1077260 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 8.069e-17
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS+GA S+ +++
Sbjct:  420 GLTSVTRNYFENLVRALENGLSDVDSHGACSRTASS 455

HSP 2 Score: 51.6026 bits (122), Expect = 8.069e-17
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = -1

Query:  365 SSRMADDNHWSCEQCTYANVRSATACQMCNQQR 463
            S  + D  HWSCE CT+AN+R+AT C MC Q+R
Sbjct:  481 SRNIDDSGHWSCEHCTFANIRTATICAMCQQRR 513

HSP 3 Score: 21.9422 bits (45), Expect = 8.069e-17
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  412 NEFRTKLAGL 421

[Close]

BLAST of HO062261 vs. TrEMBL
Match: B9HHY6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820446 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.062e-15
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS+GA S+ +++
Sbjct:  498 GLTSVTRNYFENLVRALENGLSDVDSHGACSRMASS 533

HSP 2 Score: 47.3654 bits (111), Expect = 1.062e-15
Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = -1

Query:  365 SSRMADDNHWSCEQCTYANVRSATACQMCNQQR 463
            S  + +  HWSCE CT+AN++ AT C MC Q+R
Sbjct:  559 SRNIDEPGHWSCEYCTFANIKPATICAMCQQRR 591

HSP 3 Score: 21.9422 bits (45), Expect = 1.062e-15
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  490 NEFRTKLAGL 499

[Close]

BLAST of HO062261 vs. TrEMBL
Match: B9HYH6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822354 PE=4 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.062e-15
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS+G  S+ +++
Sbjct:  498 GLTSVTRNYFENLVRALENGLSDVDSHGTCSRTASS 533

HSP 2 Score: 49.2914 bits (116), Expect = 1.062e-15
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = -1

Query:  365 SSRMADDNHWSCEQCTYANVRSATACQMCNQQR 463
            S  + D  HWSCE CT+AN++ AT C MC Q+R
Sbjct:  559 SRNIDDPGHWSCEHCTFANIKPATICAMCQQRR 591

HSP 3 Score: 21.9422 bits (45), Expect = 1.062e-15
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  490 NEFRTKLAGL 499

[Close]

BLAST of HO062261 vs. TrEMBL
Match: D7KRV7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_894096 PE=4 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 3.041e-14
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VT+NYFENLVRALENGL DV S+ A  + S++
Sbjct:  487 GLTSVTKNYFENLVRALENGLSDVSSHDAYDRTSSS 522

HSP 2 Score: 50.0618 bits (118), Expect = 3.041e-14
Identity = 19/29 (65.52%), Postives = 20/29 (68.97%), Query Frame = -1

Query:  365 ADDNHWSCEQCTYANVRSATACQMCNQQR 451
            +D NHWSCE CTY N RS T CQMC   R
Sbjct:  539 SDSNHWSCEYCTYVNPRSTTICQMCEHGR 567

HSP 3 Score: 21.9422 bits (45), Expect = 3.041e-14
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  479 NEFRTKLAGL 488

[Close]

BLAST of HO062261 vs. TrEMBL
Match: A5C6J4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008933 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 6.574e-14
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS GA S+ +++
Sbjct:  494 GLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSS 529

HSP 2 Score: 41.2022 bits (95), Expect = 6.574e-14
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = -1

Query:  365 DDNHWSCEQCTYANVRSATACQMCNQQR 448
            D + W CE C  AN +SA  CQMC+Q+R
Sbjct:  559 DSSRWYCEHCATANAKSAYTCQMCHQRR 586

HSP 3 Score: 23.483 bits (49), Expect = 6.574e-14
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            NDFRTKLAG+
Sbjct:  486 NDFRTKLAGL 495

[Close]

BLAST of HO062261 vs. TrEMBL
Match: D7U1N0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_102.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010742001 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 6.613e-14
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VTRNYFENLVRALENGL DVDS GA S+ +++
Sbjct:  445 GLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSS 480

HSP 2 Score: 41.2022 bits (95), Expect = 6.613e-14
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = -1

Query:  365 DDNHWSCEQCTYANVRSATACQMCNQQR 448
            D + W CE C  AN +SA  CQMC+Q+R
Sbjct:  488 DSSRWYCEHCATANAKSAYTCQMCHQRR 515

HSP 3 Score: 23.483 bits (49), Expect = 6.613e-14
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            NDFRTKLAG+
Sbjct:  437 NDFRTKLAGL 446

[Close]

BLAST of HO062261 vs. TrEMBL
Match: C5YBD5_SORBI (Putative uncharacterized protein Sb06g021080 OS=Sorghum bicolor GN=Sb06g021080 PE=4 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 2.380e-13
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = -1

Query:  362 SSRMADD-NHWSCEQCTYANVRSATACQMCNQQRR 463
            SSR  DD N W+C+QCTYAN RSA ACQ C++Q R
Sbjct:  555 SSRGGDDSNIWTCDQCTYANPRSARACQACDRQHR 589

HSP 2 Score: 45.0542 bits (105), Expect = 2.380e-13
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDV---DSNGAASQQSNT 641
            GLT VTRNYFENLVRALE GL DV    S+G  S+ + +
Sbjct:  493 GLTSVTRNYFENLVRALETGLNDVGPSTSHGTCSKSATS 531

HSP 3 Score: 23.483 bits (49), Expect = 2.380e-13
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            NDFRTKLAG+
Sbjct:  485 NDFRTKLAGL 494

[Close]

BLAST of HO062261 vs. TrEMBL
Match: B4FVC1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 6.657e-13
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = -1

Query:  362 SSRMADD-NHWSCEQCTYANVRSATACQMCNQQRR 463
            SSR  DD N W+C+QCTYAN +SA ACQ C+ Q R
Sbjct:  555 SSRGVDDSNIWTCDQCTYANPKSARACQACDHQHR 589

HSP 2 Score: 45.0542 bits (105), Expect = 6.657e-13
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDV---DSNGAASQQSNT 641
            GLT VTRNYFENLVRALE GL DV    S+G  S+ + +
Sbjct:  493 GLTSVTRNYFENLVRALETGLNDVGPSTSHGTCSKSATS 531

HSP 3 Score: 23.483 bits (49), Expect = 6.657e-13
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            NDFRTKLAG+
Sbjct:  485 NDFRTKLAGL 494

[Close]

BLAST of HO062261 vs. TAIR peptide
Match: AT1G65430.1 (| Symbols: ARI8, ATARI8 | IBR domain-containing protein | chr1:24301165-24306159 REVERSE LENGTH=567)

HSP 1 Score: 50.8322 bits (120), Expect = 2.138e-15
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VT+NYFENLVRALENGL DV+S+ A  + S++
Sbjct:  487 GLTSVTKNYFENLVRALENGLSDVNSHDAYDRTSSS 522

HSP 2 Score: 46.2098 bits (108), Expect = 2.138e-15
Identity = 17/29 (58.62%), Postives = 19/29 (65.52%), Query Frame = -1

Query:  365 ADDNHWSCEQCTYANVRSATACQMCNQQR 451
            +D +HW CE CTY N RS T CQMC   R
Sbjct:  539 SDSSHWPCEYCTYVNPRSTTICQMCEHGR 567

HSP 3 Score: 21.9422 bits (45), Expect = 2.138e-15
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            N+FRTKLAG+
Sbjct:  479 NEFRTKLAGL 488

[Close]

BLAST of HO062261 vs. TAIR peptide
Match: AT2G31510.1 (| Symbols: ARI7, ATARI7 | IBR domain-containing protein | chr2:13416991-13421170 REVERSE LENGTH=562)

HSP 1 Score: 54.6842 bits (130), Expect = 3.935e-9
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT VT+NYFENLV+ALENGL DVDS+ A S +S +
Sbjct:  496 GLTSVTKNYFENLVKALENGLADVDSHAACSSKSTS 531

HSP 2 Score: 23.483 bits (49), Expect = 3.935e-9
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -2

Query:  637 NDFRTKLAGI 666
            NDFRTKLAG+
Sbjct:  488 NDFRTKLAGL 497

[Close]

BLAST of HO062261 vs. TAIR peptide
Match: AT1G05890.2 (| Symbols: ARI5 | RING/U-box superfamily protein | chr1:1779631-1784166 FORWARD LENGTH=594)

HSP 1 Score: 51.2174 bits (121), Expect = 5.881e-7
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT +T+ +FENLV+ALENGL DVDS  A+S+ +N+
Sbjct:  531 GLTSITKTFFENLVKALENGLADVDSQAASSKPANS 566

[Close]

BLAST of HO062261 vs. TAIR peptide
Match: AT1G05890.1 (| Symbols: ARI5, ATARI5 | RING/U-box superfamily protein | chr1:1779631-1784166 FORWARD LENGTH=552)

HSP 1 Score: 51.2174 bits (121), Expect = 5.881e-7
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = -3

Query:  534 GLTKVTRNYFENLVRALENGLCDVDSNGAASQQSNT 641
            GLT +T+ +FENLV+ALENGL DVDS  A+S+ +N+
Sbjct:  489 GLTSITKTFFENLVKALENGLADVDSQAASSKPANS 524

The following BLAST results are available for this feature:

BLAST of HO062261 vs. SwissProt
BLAST of HO062261 vs. TrEMBL
BLAST of HO062261 vs. TAIR peptide

BLAST of HO062261 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
ARI8_ARATH	2.090e-14	66.67	Probable E3 ubiquitin-protein ligase ARI8 OS=Arabi...	[more]
ARI7_ARATH	3.841e-8	69.44	Probable E3 ubiquitin-protein ligase ARI7 OS=Arabi...	[more]

BLAST of HO062261 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A5BJA5_VITVI	1.013e-17	75.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7U6I0_VITVI	1.014e-17	75.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RM26_RICCO	8.069e-17	75.00	Protein ariadne-1, putative OS=Ricinus communis GN...	[more]
B9HHY6_POPTR	1.062e-15	75.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HYH6_POPTR	1.062e-15	72.22	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KRV7_ARALY	3.041e-14	66.67	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A5C6J4_VITVI	6.574e-14	75.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7U1N0_VITVI	6.613e-14	75.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
C5YBD5_SORBI	2.380e-13	65.71	Putative uncharacterized protein Sb06g021080 OS=So...	[more]
B4FVC1_MAIZE	6.657e-13	62.86	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of HO062261 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G65430.1	2.138e-15	66.67	\| Symbols: ARI8, ATARI8 \| IBR domain-containing pr...	[more]
AT2G31510.1	3.935e-9	69.44	\| Symbols: ARI7, ATARI7 \| IBR domain-containing pr...	[more]
AT1G05890.2	5.881e-7	61.11	\| Symbols: ARI5 \| RING/U-box superfamily protein \|...	[more]
AT1G05890.1	5.881e-7	61.11	\| Symbols: ARI5, ATARI5 \| RING/U-box superfamily p...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 37..59 score
None	No IPR available	SEG	seg	seg	coord: 19..32 score
None	No IPR available	GENE3D	4.10.1060.10	no description	coord: 46..76 score: 0.0
None	No IPR available	SEG	seg	seg	coord: 23..42 score
None	No IPR available	SUPERFAMILY	90209	Ran BP2/NZF zinc finger-like	coord: 46..76 score: 5.6
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	no description	coord: 50..74 score: 0.
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 52..71 score
IPR001876	Zinc finger, RanBP2-type	PROFILE	PS50199	ZF_RANBP2_2	coord: 48..77 score: 8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO062261 ID=HO062261; Name=HO062261; organism=Cicer arietinum; type=EST; length=667bp
ATAAACTAAAAGAAGCTGGCCGTAAATCTACCAGAAAAAATCAGTTCACA
AACAAGCATAATTGTGTTCATCTCCAGCATGTGCTATATAAGATGTTCAG
TTACAGAAGCCTGTTGCATAAACCCCATAAGTAAATTTGAAATAAAAAAA
TACTATTTACATCAAATTAGGATTGTATTCAATAGGAGTGCAAGGAGGAT
AACCTTTTTTGCATGACTTTACCCCCTTCATCCTGTTTATATTAAATACC
CTTACAAAAATAAACCAGCACATAACTATGATTACTGATTCCATTTCAGC
TTTTCGGTGTGTTGGCCTTTGAGCAGAAGACACGTGTTTCTAATAGAGGA
ATGAATTTTCGTCGACGTTGTTGGTTGCACATCTGGCAAGCAGTGGCAGA
TCTGACATTTGCATAGGTGCATTGCTCACAAGACCAATGATTATCATCAG
CCATTCTGCTGGATATGCTAGCTCGAATAGCCCCCTTTCCTCTTCCGCCT
CTCCCCTTGCTACTCCCTGCAGCATTTTTTGAAAGTGTTGCTTTGCTGGG
AAGCAGCTCCATTACTATCCACGTCACATAAACCATTCTCTAATGCCCTA
ACCAAATTCTCAAAGTAGTTTCTAGTAACCTTGGTCAATCCCAGCTAGTT
TTGTGCGAAAATCATTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001876	Znf_RanBP2

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