HO062896

EST Overview
NameHO062896
Unique NameHO062896
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length688
Libraries
Library NameType
LIBEST_026409 Chickpea drought stressed cDNA SSH library AB2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062896 vs. TrEMBL
Match: B9SX36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0303920 PE=4 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.673e-8
Identity = 49/135 (36.30%), Postives = 59/135 (43.70%), Query Frame = -1
Query:  149 TITARNPIRKDGNNLGRGSP*KCWV*GPQKRGGEGFCRNFIQGHGNTNRV*FPFNRVKHRRQLV**IRCQQQLPRGGVIFPLNIKVNQNVRG*GLGXXXXXXXXXXXXXXXXVDSLGADNDISVSDSSCKFRLRL 553
            TITA NP  K G     GS    W  G +    EG    F QGH NT  +  P     H +     +   QQ  +   I PLN++V Q VR   LG                VDSL  +NDIS+ +SSCKF L L
Sbjct:  124 TITATNPNEKIGIYYEGGSHIGVWYSGTKLC--EGSLPKFYQGHENTTVLNVPLTG--HTQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRI-KLGKLKLFEIKFLVKCKLDVDSLSTNNDISIRNSSCKFSLNL 253          

HSP 2 Score: 27.7202 bits (60), Expect = 1.673e-8
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = -3
Query:  606 G*LYLGF*GPKLPKYSVDRLGIT 674
            G LYL F  PKLP +S+DRL IT
Sbjct:   86 GILYLVF-RPKLPDFSIDRLQIT 107          
BLAST of HO062896 vs. TrEMBL
Match: B9IDC5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_575862 PE=4 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 2.161e-8
Identity = 48/136 (35.29%), Postives = 63/136 (46.32%), Query Frame = -1
Query:  149 TITARNPIRKDGNNLGRGSP*KCWV*GPQKRGGEGFCRNFIQGHGNTNRV*FPFN-RVKHRRQLV**IRCQQQLPRGGVIFPLNIKVNQNVRG*GLGXXXXXXXXXXXXXXXXVDSLGADNDISVSDSSCKFRLRL 553
            TITARNP +K G     GS    W  G      +G    F QGH NT  +    + +      L+     QQQ  + G+I PLN++V Q VR    G                VD+L A+N I++ +SSCKFR RL
Sbjct:  144 TITARNPNKKVGVYYEGGSHISVWYTGTNLC--QGSLPRFYQGHRNTTVLNVVLSGQTNDANTLI--TSLQQQQQQTGII-PLNLRVIQPVRI-KFGKLKIMKVKFRVRCRLDVDNLAANNAINIRNSSCKFRFRL 273          

HSP 2 Score: 31.9574 bits (71), Expect = 2.161e-8
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = -3
Query:  606 SG*LYLGF*GPKLPKYSVDRLGIT 677
            +G LYL F  PKLPKYS+DRL IT
Sbjct:  105 AGILYLVF-QPKLPKYSIDRLQIT 127          
BLAST of HO062896 vs. TrEMBL
Match: B9I456_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570412 PE=4 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.164e-8
Identity = 49/135 (36.30%), Postives = 62/135 (45.93%), Query Frame = -1
Query:  149 TITARNPIRKDGNNLGRGSP*KCWV*GPQKRGGEGFCRNFIQGHGNTNRV*FPFNRVKHRRQLV**IRCQQQLPRGGVIFPLNIKVNQNVRG*GLGXXXXXXXXXXXXXXXXVDSLGADNDISVSDSSCKFRLRL 553
            TITARNP +K G     GS    W  G      +G    F QGH NT  +    +        +     QQQL  G  I PLN++V+Q VR   LG                +DSL A+N I++ +SSCKFR RL
Sbjct:  138 TITARNPNKKVGVYYEGGSHISVWYTGTNLC--QGSLPKFYQGHRNTTVLNVLLSGQTDDGNTLLTSLQQQQLQTG--IIPLNLRVDQPVRI-KLGKLKLMKVKFRVRCRLDIDSLAANNAINIRNSSCKFRFRL 267          

HSP 2 Score: 28.1054 bits (61), Expect = 2.164e-8
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = -3
Query:  606 SG*LYLGF*GPKLPKYSVDRLGIT 677
            +G LYL F  PKLPK+S+D L IT
Sbjct:   99 AGILYLVF-QPKLPKFSIDTLQIT 121          
The following BLAST results are available for this feature:
BLAST of HO062896 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B9SX36_RICCO1.673e-836.30Putative uncharacterized protein OS=Ricinus commun... [more]
B9IDC5_POPTR2.161e-835.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9I456_POPTR2.164e-836.30Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 53..63
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062896 ID=HO062896; Name=HO062896; organism=Cicer arietinum; type=EST; length=688bp
GCTCAAAGGGCTGATGGAACACCTGATCCTCCTTCCCTTATTATTAAAAA
TCTCAATCATCAGAAGGAAACCATAAAAGAACAAAACAAGGATTAATATT
TATAACTATGGCACATATTCTACTATTAAATAAGTACAAATGAATTCATA
GCCTAAGCCTGAACTTACAGCTACTGTCTGAAACACTAATATCATTATCA
GCACCAAGGCTATCCACCACAAGCCTGNACCTAACACGAAACTTGACTCT
AAAGATCTTCAACTTACCCAAGCCTTAACCCCGCACATTCTGATTGACTT
TAATATTAAGTGGGAATATTACCCCGCCTCTTGGCAGCTGCTGCTGGCAA
CGTATTTACTAAACCAGTTGCCTCCTGTGTTTGACCCTGTTAAAAGGAAA
TTAAACACGGTTTGTATTACCATGACCCTGAATGAAATTTCGGCAAAAAC
CCTCTCCCCCCCGTTTCTGTGGTCCTTATACCCAGCACTTTTATGGGCTT
CCTCTCCCTAGGTTATTCCCATCCTTCCTAATTGGGTTTCTAGCAGTTAT
TGTCCCGTTGAAACGAAACAAAAAAAACTGGTTGTTATCCNAAAGATTGA
ACTGGGGTAATTCCCAATCTGTCTACTGAGTATTTGGGAAGCTTTGGGCC
CTAAAAGCCAAGGTAGAGTTACCCCGATGGGTGATGGG
back to top