GR421045

EST Overview
NameGR421045
Unique NameGR421045
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length322
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR421045 vs. SwissProt
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.146e-15
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  153 EAAF---RNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 196          
BLAST of GR421045 vs. SwissProt
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.146e-14
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. SwissProt
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.146e-14
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. SwissProt
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.497e-14
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 2
Query:   38 RNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  114 RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 153          
BLAST of GR421045 vs. SwissProt
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 4.356e-14
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDE+ERVAK+N
Sbjct:  160 EAAF---RNIKNIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 203          
BLAST of GR421045 vs. SwissProt
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 76.6406 bits (187), Expect = 4.356e-14
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDE+ERVAK+N
Sbjct:  160 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 203          
BLAST of GR421045 vs. SwissProt
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 4.356e-14
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDE+ERVAK+N
Sbjct:  160 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 203          
BLAST of GR421045 vs. SwissProt
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.356e-14
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDE+ERVAK+N
Sbjct:  184 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 227          
BLAST of GR421045 vs. SwissProt
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.690e-14
Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = 2
Query:   38 RNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            RNIKSIAECLADELINAA+GSSNSYAIKKKDE+ERVAK+N
Sbjct:  170 RNIKSIAECLADELINAARGSSNSYAIKKKDELERVAKSN 209          
BLAST of GR421045 vs. SwissProt
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.690e-14
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RN+K+IAECLADELINAAKGSSNSYAIKKKDE+ERVAK+N
Sbjct:  166 EAAF---RNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 209          
BLAST of GR421045 vs. TrEMBL
Match: D7LJR1_ARALY (ATRPS5B OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482719 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. TrEMBL
Match: D7KZM4_ARALY (ATRPS5A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478543 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. TrEMBL
Match: C6TFI0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:   84 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 127          
BLAST of GR421045 vs. TrEMBL
Match: C6SX30_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  160 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 203          
BLAST of GR421045 vs. TrEMBL
Match: C6SW88_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  160 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 203          
BLAST of GR421045 vs. TrEMBL
Match: B9T7U3_RICCO (40S ribosomal protein S5, putative OS=Ricinus communis GN=RCOM_0408940 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  165 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 208          
BLAST of GR421045 vs. TrEMBL
Match: B9T025_RICCO (40S ribosomal protein S5, putative OS=Ricinus communis GN=RCOM_0037210 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  167 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 210          
BLAST of GR421045 vs. TrEMBL
Match: B9IIE4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_256059 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  160 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 203          
BLAST of GR421045 vs. TrEMBL
Match: B9H9X8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561203 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  164 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 207          
BLAST of GR421045 vs. TrEMBL
Match: B7FGS4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.283e-13
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. TAIR peptide
Match: AT3G11940.2 (| Symbols: ATRPS5A, AML1, RPS5A | ribosomal protein 5A | chr3:3778175-3779354 REVERSE LENGTH=207)

HSP 1 Score: 78.5666 bits (192), Expect = 9.076e-16
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. TAIR peptide
Match: AT3G11940.1 (| Symbols: ATRPS5A, AML1, RPS5A | ribosomal protein 5A | chr3:3778175-3779354 REVERSE LENGTH=207)

HSP 1 Score: 78.5666 bits (192), Expect = 9.076e-16
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. TAIR peptide
Match: AT2G37270.2 (| Symbols: ATRPS5B, RPS5B | ribosomal protein 5B | chr2:15647883-15649042 REVERSE LENGTH=207)

HSP 1 Score: 78.5666 bits (192), Expect = 9.076e-16
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
BLAST of GR421045 vs. TAIR peptide
Match: AT2G37270.1 (| Symbols: ATRPS5B, RPS5B | ribosomal protein 5B | chr2:15647883-15649042 REVERSE LENGTH=207)

HSP 1 Score: 78.5666 bits (192), Expect = 9.076e-16
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   17 KAAFARDRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 157
            +AAF   RNIK+IAECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct:  163 EAAF---RNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN 206          
The following BLAST results are available for this feature:
BLAST of GR421045 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RS5_CICAR5.146e-1591.4940S ribosomal protein S5 (Fragment) OS=Cicer ariet... [more]
RS52_ARATH1.146e-1489.3640S ribosomal protein S5-2 OS=Arabidopsis thaliana... [more]
RS51_ARATH1.146e-1489.3640S ribosomal protein S5-1 OS=Arabidopsis thaliana... [more]
RS5_NICPL1.497e-1497.5040S ribosomal protein S5 (Fragment) OS=Nicotiana p... [more]
RS5_MOUSE4.356e-1485.1140S ribosomal protein S5 OS=Mus musculus GN=Rps5 P... [more]
RS5_HUMAN4.356e-1485.1140S ribosomal protein S5 OS=Homo sapiens GN=RPS5 P... [more]
RS5_BOVIN4.356e-1485.1140S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=... [more]
RS5A_DROME4.356e-1485.1140S ribosomal protein S5a OS=Drosophila melanogast... [more]
RS5_PODCA5.690e-1492.5040S ribosomal protein S5 OS=Podocoryne carnea GN=R... [more]
RS5_CAEEL5.690e-1482.9840S ribosomal protein S5 OS=Caenorhabditis elegans... [more]
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BLAST of GR421045 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7LJR1_ARALY2.283e-1389.36ATRPS5B OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
D7KZM4_ARALY2.283e-1389.36ATRPS5A OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
C6TFI0_SOYBN2.283e-1389.36Putative uncharacterized protein OS=Glycine max PE... [more]
C6SX30_SOYBN2.283e-1389.36Putative uncharacterized protein OS=Glycine max PE... [more]
C6SW88_SOYBN2.283e-1389.36Putative uncharacterized protein OS=Glycine max PE... [more]
B9T7U3_RICCO2.283e-1389.3640S ribosomal protein S5, putative OS=Ricinus comm... [more]
B9T025_RICCO2.283e-1389.3640S ribosomal protein S5, putative OS=Ricinus comm... [more]
B9IIE4_POPTR2.283e-1389.36Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9H9X8_POPTR2.283e-1389.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B7FGS4_MEDTR2.283e-1389.36Putative uncharacterized protein OS=Medicago trunc... [more]
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BLAST of GR421045 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G11940.29.076e-1689.36| Symbols: ATRPS5A, AML1, RPS5A | ribosomal protei... [more]
AT3G11940.19.076e-1689.36| Symbols: ATRPS5A, AML1, RPS5A | ribosomal protei... [more]
AT2G37270.29.076e-1689.36| Symbols: ATRPS5B, RPS5B | ribosomal protein 5B |... [more]
AT2G37270.19.076e-1689.36| Symbols: ATRPS5B, RPS5B | ribosomal protein 5B |... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S7GENE3D1.10.455.10no descriptioncoord: 9..52
score: 7.8
IPR000235Ribosomal protein S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 10..53
score: 1.3
IPR000235Ribosomal protein S7PFAMPF00177Ribosomal_S7coord: 7..52
score: 1.3
IPR000235Ribosomal protein S7SUPERFAMILY47973Ribosomal protein S7coord: 9..53
score: 1.8
IPR005716Ribosomal protein S7, eukaryotic/archaealPANTHERPTHR11205:SF140S RIBOSOMAL PROTEIN S5coord: 10..53
score: 1.3
NoneNo IPR availableSEGsegsegcoord: 17..30
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR421045 ID=GR421045; Name=GR421045; organism=Cicer arietinum; type=EST; length=322bp
CACTGGTCTATCTTTTAAAGCTGCATTCGCACGTGACAGAAACATCAAGT
CAATTGCTGAATGTCTTGCTGATGAACTTATTAATGCAGCAAAAGGTTCA
TCCAACAGTTATGCAATCAAGAAAAAAGATGAAATTGAGAGAGTTGCTAA
GGCAAATCACCTTGCGTGGGTTAAGCAGCACAGCAGTATTGGCAACCTCT
GCTTTTTGAAAATATATGTTTCGGAATTTAATTTTTCATTATGAAGCATA
CTTGGTAGTAACTTAATGGAATTTTTAAGCAATGAAAATTTTTGTTTTTC
GAGTTTGCAGAATCTAGCTAGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_uS7
IPR005716Ribosomal_uS7_euk/arc