GR399502
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR399502 vs. SwissProt
Match: PM14_ARATH (Pre-mRNA branch site p14-like protein OS=Arabidopsis thaliana GN=At5g12190 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.753e-23 Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAK AVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKK EDEI +++EKYGV+TK+K Sbjct: 67 IYDAKNAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKSEDEITKLQEKYGVSTKDK 124
BLAST of GR399502 vs. SwissProt
Match: PM14_MOUSE (Pre-mRNA branch site protein p14 OS=Mus musculus GN=Sf3b14 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.806e-13 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTT 166 I+DAK A DHLSGFNV NRYL+VLYY + +K D KKKE+++ ++EKYG+ T Sbjct: 67 IFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINT 121
BLAST of GR399502 vs. SwissProt
Match: PM14_HUMAN (Pre-mRNA branch site protein p14 OS=Homo sapiens GN=SF3B14 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.806e-13 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTT 166 I+DAK A DHLSGFNV NRYL+VLYY + +K D KKKE+++ ++EKYG+ T Sbjct: 67 IFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINT 121
BLAST of GR399502 vs. SwissProt
Match: PM14_DROME (Pre-mRNA branch site p14-like protein OS=Drosophila melanogaster GN=CG13298 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.819e-12 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKE 172 I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK++E+ ++ KY + T E Sbjct: 63 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDMDKKQEELNNIKAKYNLKTPE 119
BLAST of GR399502 vs. SwissProt
Match: PM14_CAEEL (Pre-mRNA branch site p14-like protein OS=Caenorhabditis elegans GN=C50D2.5 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.480e-11 Identity = 28/53 (52.83%), Postives = 41/53 (77.36%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGV 160 I+DAKTA +HLSG+NV+NRYL+VLYYQ K K+ D +K ++ ++E+YG+ Sbjct: 67 IFDAKTACEHLSGYNVSNRYLVVLYYQATKAWKRMDTEKARTKLEDIKERYGI 119
BLAST of GR399502 vs. TrEMBL
Match: B7FGI3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.453e-23 Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAKTAVDHLSGFNVANRYLIVLYYQ AKMSKKFDQKKKEDEIARM+EKYGV+TK+K Sbjct: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVSTKDK 124
BLAST of GR399502 vs. TrEMBL
Match: B9SXX1_RICCO (Pre-mRNA branch site protein p14, putative OS=Ricinus communis GN=RCOM_0974800 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.098e-22 Identity = 51/58 (87.93%), Postives = 57/58 (98.28%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAKTAVDHLSGFNVANRYLIVLYYQ AKMSKKFDQ+KKE+EIA+M+EKYGV+TK+K Sbjct: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQRKKEEEIAKMQEKYGVSTKDK 124
BLAST of GR399502 vs. TrEMBL
Match: D7M4G9_ARALY (RNA recognition motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909193 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.579e-22 Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAK AVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKK EDEI +++EKYGV+TK+K Sbjct: 67 IYDAKNAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKSEDEITKLQEKYGVSTKDK 124
BLAST of GR399502 vs. TrEMBL
Match: B9HNI9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_649901 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.579e-22 Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKE 172 IYDAKTAVDHLSGFNVANRYLIVLYYQ AKMSKKFDQKKKE+EI +M+EKYGVTTK+ Sbjct: 68 IYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEEEIVKMQEKYGVTTKD 124
BLAST of GR399502 vs. TrEMBL
Match: B9GG60_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_706505 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.579e-22 Identity = 51/58 (87.93%), Postives = 57/58 (98.28%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAKTAVDHLSGFNVANRYLIVLYYQ AKM+KKFDQKKKE+EIA+M+EKYGV+TK+K Sbjct: 68 IYDAKTAVDHLSGFNVANRYLIVLYYQPAKMNKKFDQKKKEEEIAKMQEKYGVSTKDK 125
BLAST of GR399502 vs. TrEMBL
Match: B3TLZ0_ELAGV (RNA binding protein OS=Elaeis guineensis var. tenera PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.041e-21 Identity = 50/58 (86.21%), Postives = 56/58 (96.55%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAKTAVDHLSGFNVANRYLIVLYYQ AKMSKK DQKKKEDE+ARM+EKYG+++K+K Sbjct: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKVDQKKKEDELARMQEKYGLSSKDK 124
BLAST of GR399502 vs. TrEMBL
Match: A5AES3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037629 PE=4 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.168e-21 Identity = 49/54 (90.74%), Postives = 53/54 (98.15%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVT 163 IYDAKTAVDHLSGFNVANRYLIVLYYQ AKMSKKFDQKKKEDE+A+M+EKYGV+ Sbjct: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDELAKMQEKYGVS 120
BLAST of GR399502 vs. TrEMBL
Match: D5A9T1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.714e-20 Identity = 46/58 (79.31%), Postives = 54/58 (93.10%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAK AVDHLSGFNVANRYLIVLYYQ +KM+KK D KKKED++A+M+EKYGV+TK+K Sbjct: 66 IYDAKNAVDHLSGFNVANRYLIVLYYQQSKMTKKVDHKKKEDDLAKMQEKYGVSTKDK 123
BLAST of GR399502 vs. TrEMBL
Match: D7L2R9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899711 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.318e-19 Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IY+AK AVDHLSGFN+ANRYLIV YYQHAKMSKK D KK+E+EI +++EKYGV+TK+K Sbjct: 68 IYEAKEAVDHLSGFNIANRYLIVQYYQHAKMSKKLDLKKEEEEITKLQEKYGVSTKDK 125
BLAST of GR399502 vs. TrEMBL
Match: C5WVZ7_SORBI (Putative uncharacterized protein Sb01g003790 OS=Sorghum bicolor GN=Sb01g003790 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.838e-18 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTK 169 IYDAK AVDHLSGFNVANRYLIVLYYQ AKMSKK D KKKEDEI R++EKYG+ +K Sbjct: 67 IYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEDEITRLQEKYGIGSK 122
BLAST of GR399502 vs. TAIR peptide
Match: AT5G12190.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:3940731-3941105 REVERSE LENGTH=124) HSP 1 Score: 107.842 bits (268), Expect = 1.694e-24 Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 2 Query: 2 IYDAKTAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKKEDEIARMREKYGVTTKEK 175 IYDAK AVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKK EDEI +++EKYGV+TK+K Sbjct: 67 IYDAKNAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKSEDEITKLQEKYGVSTKDK 124 The following BLAST results are available for this feature:
BLAST of GR399502 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 5
BLAST of GR399502 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR399502 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR399502 ID=GR399502; Name=GR399502; organism=Cicer arietinum; type=EST; length=384bpback to top |