GR399788

EST Overview
NameGR399788
Unique NameGR399788
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length725
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR399788 vs. TrEMBL
Match: B9RPV9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1542210 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.834e-7
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = -1 
Query:   12 QFTPTDRHGSVVKATSPLSCTHRTAALSGLP 104
            QFTPTDRHGSVVKATS LSCT+RT ALSG+P
Sbjct:   57 QFTPTDRHGSVVKATSSLSCTYRTIALSGVP 87
The following BLAST results are available for this feature:
BLAST of GR399788 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9RPV9_RICCO4.834e-787.10Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 34..47
score
NoneNo IPR availableSEGsegsegcoord: 6..18
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR399788 ID=GR399788; Name=GR399788; organism=Cicer arietinum; type=EST; length=725bp
ATCGGTCCCTAAGGAAGCCCCGAAAGGGCTGCCGTCCGATGGGTACACGA
AAGTGGCGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGTGA
ATTGGATGATCGGGCCGGGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTC
CCTAAGATTAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCG
GTCGCCCTACGCGACTGGCGCTTCAAAAGGTAGTTTACTTGCTTACTCGT
TAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTTGCG
AGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGGAACTTC
CAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGT
ACCCCAAACCGACACAGGTGAACAAGTAAAGTATACTAGGGGCGTTGGAG
AGAACATGTCAAAAGAACTCTGTCAAATGCCCCCATAACTTCGGGAGAAG
GGGTGGTCTTCTATCTTTTGATTATAAAACGGCTACTTTAATGGGGGTAG
CATCTTTTTTATAAAATTATCGCACCTGCTTTTATTATTTTTATTAATAA
CAATAGTTTCTCAGCCTGTCTTATGCTATATTATTTCCTATATCACCACA
CTATTTGAATAATAACATATTTATTTAAAATTCTAATATTATTTTTTGAT
TTACATAGTTCATACATTTTGTATA
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