GR407391
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407391 vs. SwissProt
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 1.474e-36 Identity = 70/86 (81.40%), Postives = 74/86 (86.05%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQT+LCQPTGG+A+LTEGCSFR+KGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of GR407391 vs. SwissProt
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 2.129e-35 Identity = 70/86 (81.40%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC CQTVLCQPTGG+ARLTEGCSFR+KGD Sbjct: 1 MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
BLAST of GR407391 vs. SwissProt
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.074e-34 Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQT+LC PTGG+A+LTEGCSFRKK Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of GR407391 vs. SwissProt
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 4.015e-34 Identity = 68/84 (80.95%), Postives = 70/84 (83.33%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 MVLQNDIDLL+PP VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGG+ARL EGCSFRKK Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of GR407391 vs. SwissProt
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.579e-30 Identity = 62/86 (72.09%), Postives = 67/86 (77.91%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVL +DIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C +VLC PTG RLTEGCSFR+K D Sbjct: 1 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
BLAST of GR407391 vs. SwissProt
Match: RS27_SCHPO (40S ribosomal protein S27 OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.171e-25 Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 52 IDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 +DLLNP VQ P SFFMDVKC GCFNITTVFSH+QTVV+CG+C +VLCQPTGG+ARL EGCSFR+K Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
BLAST of GR407391 vs. SwissProt
Match: RS27_NEUCR (40S ribosomal protein S27 OS=Neurospora crassa GN=rps-27 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.294e-24 Identity = 51/78 (65.38%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 52 IDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 +DLLNP V +P SFFMDVKC GCF ITTVFSH+QTVV+C C TVLCQPTGG+ARLTEGCSFR+K Sbjct: 5 VDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
BLAST of GR407391 vs. SwissProt
Match: RS27_XENLA (40S ribosomal protein S27 OS=Xenopus laevis GN=rps27 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.691e-24 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 55 DLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 DLL+P VQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C TVLCQPTGG+ARLTEGCSFR+K Sbjct: 6 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of GR407391 vs. SwissProt
Match: RS27_RAT (40S ribosomal protein S27 OS=Rattus norvegicus GN=Rps27 PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 1.691e-24 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 55 DLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 DLL+P VQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C TVLCQPTGG+ARLTEGCSFR+K Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of GR407391 vs. SwissProt
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 1.691e-24 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 55 DLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 DLL+P VQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C TVLCQPTGG+ARLTEGCSFR+K Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of GR407391 vs. TrEMBL
Match: C6SWV6_SOYBN (Ribosomal protein S27 OS=Glycine max PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.619e-38 Identity = 77/90 (85.56%), Postives = 77/90 (85.56%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD*MVC 303 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD MVC Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGDWMVC 90
BLAST of GR407391 vs. TrEMBL
Match: B7FHA3_MEDTR (Ribosomal protein S27 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.941e-36 Identity = 74/86 (86.05%), Postives = 74/86 (86.05%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 86
BLAST of GR407391 vs. TrEMBL
Match: B9RG16_RICCO (Ribosomal protein S27 OS=Ricinus communis GN=RCOM_1300070 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.323e-36 Identity = 73/86 (84.88%), Postives = 74/86 (86.05%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFR+KGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 86
BLAST of GR407391 vs. TrEMBL
Match: B7FN54_MEDTR (Ribosomal protein S27 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.323e-36 Identity = 73/86 (84.88%), Postives = 74/86 (86.05%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGG+ARLTEGCSFRKKGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLTEGCSFRKKGD 86
BLAST of GR407391 vs. TrEMBL
Match: C6SYW6_SOYBN (Ribosomal protein S27 OS=Glycine max PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.647e-36 Identity = 73/86 (84.88%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPP VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD Sbjct: 1 MVLQNDIDLLNPPVELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 86
BLAST of GR407391 vs. TrEMBL
Match: A5APU3_VITVI (Ribosomal protein S27 OS=Vitis vinifera GN=VITISV_040920 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.146e-35 Identity = 72/86 (83.72%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVL NDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFR+KGD Sbjct: 1 MVLPNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 86
BLAST of GR407391 vs. TrEMBL
Match: Q3HVK9_SOLTU (Ribosomal protein S27 OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.802e-35 Identity = 71/86 (82.56%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVL ND+DLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFR+KGD Sbjct: 1 MVLPNDVDLLNPPAEQEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 86
BLAST of GR407391 vs. TrEMBL
Match: D7SVF6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_68.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032964001 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.780e-35 Identity = 72/86 (83.72%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVL NDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ VLCQPTGGRARLTEGCSFRKKGD Sbjct: 75 MVLPNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQLVLCQPTGGRARLTEGCSFRKKGD 160
BLAST of GR407391 vs. TrEMBL
Match: B5M1X0_RHEAU (Ribosomal protein S27 OS=Rheum australe PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.780e-35 Identity = 71/86 (82.56%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPP VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ VLCQPTGGRARLTEGCSFR+KGD Sbjct: 1 MVLQNDIDLLNPPVELEKKKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQAVLCQPTGGRARLTEGCSFRRKGD 86
BLAST of GR407391 vs. TrEMBL
Match: D7TFK6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_150.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001113001 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.243e-35 Identity = 71/87 (81.61%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 31 IMVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 + VL NDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFR+KGD Sbjct: 1 MFVLPNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 87
BLAST of GR407391 vs. TAIR peptide
Match: AT3G61110.1 (| Symbols: ARS27A, RS27A | ribosomal protein S27 | chr3:22611710-22612632 FORWARD LENGTH=86) HSP 1 Score: 151.369 bits (381), Expect = 1.804e-37 Identity = 70/86 (81.40%), Postives = 74/86 (86.05%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQT+LCQPTGG+A+LTEGCSFR+KGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of GR407391 vs. TAIR peptide
Match: AT2G45710.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr2:18831243-18831999 FORWARD LENGTH=84) HSP 1 Score: 143.665 bits (361), Expect = 3.763e-35 Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQT+LC PTGG+A+LTEGCSFRKK Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of GR407391 vs. TAIR peptide
Match: AT5G47930.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr5:19406423-19407329 REVERSE LENGTH=84) HSP 1 Score: 143.28 bits (360), Expect = 4.914e-35 Identity = 68/84 (80.95%), Postives = 70/84 (83.33%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKK 285 MVLQNDIDLL+PP VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGG+ARL EGCSFRKK Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of GR407391 vs. TAIR peptide
Match: AT3G61111.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:22613230-22613919 REVERSE LENGTH=86) HSP 1 Score: 124.405 bits (311), Expect = 2.362e-29 Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 34 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 291 MVLQNDIDLLNPPA V SPNS+FM V+C C NITT+FSHSQTVVVCG CQ VLCQPTGG+A+LT GCSFRK D Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVPSPNSYFMLVRCSDCINITTIFSHSQTVVVCGKCQNVLCQPTGGKAKLTVGCSFRKLTD 86 The following BLAST results are available for this feature:
BLAST of GR407391 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR407391 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR407391 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407391 ID=GR407391; Name=GR407391; organism=Cicer arietinum; type=EST; length=430bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|