GR408930

EST Overview


Name	GR408930
Unique Name	GR408930
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	379

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR408930 vs. TAIR peptide
Match: AT1G44191.1 (| Symbols: | ECA1 gametogenesis related family protein | chr1:16813654-16814733 REVERSE LENGTH=359)

HSP 1 Score: 49.2914 bits (116), Expect = 6.967e-7
Identity = 32/100 (32.00%), Postives = 42/100 (42.00%), Query Frame = 2

Query:   92 TKPPAQRELQHKTSTQLIKKNMPPKNQTKKITAKAKREHPPLPKSKKRGPFPTPPKEKKGLNPPEPRVETPA*SLMKSRPP----AGPPKGKTPNPLEAK 379
            ++PP+   L  K S    K + PP+   K          PP+PK     P P+ P      +PP P+  +P  S  KS PP      PPK  TP P   K
Sbjct:   89 SRPPSP--LSPKKSPPSPKPSPPPRTPKKSPPPPKPSSPPPIPKKSPPPPKPSSPPPTPKKSPPPPKPSSPPPSPKKSPPPPKPSPSPPKPSTPPPTPKK 186

The following BLAST results are available for this feature:

BLAST of GR408930 vs. TAIR peptide

BLAST of GR408930 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G44191.1	6.967e-7	32.00	\| Symbols: \| ECA1 gametogenesis related family pr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 19..32 score
None	No IPR available	SEG	seg	seg	coord: 7..21 score: NAcoord: 47..55 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408930 ID=GR408930; Name=GR408930; organism=Cicer arietinum; type=EST; length=379bp
CACCGCTACCCCACCCTTTGCACTTCTTTACTTACAACTTAAAACCCTTA
ACACTGCTTACCCAATTCAAACTTAAAAAAAGCTTAACCAAACAAAACCC
CCTGCCCAACGGGAACTGCAACACAAAACTTCAACTCAACTCATAAAAAA
AAACATGCCCCCAAAAAACCAAACCAAAAAAATTACCGCAAAGGCCAAAA
GGGAACATCCCCCGCTTCCAAAATCAAAAAAAAGGGGCCCATTTCCCACC
CCTCCAAAGGAAAAAAAAGGTTTGAACCCCCCCGAACCCCGCGTTGAAAC
CCCCGCTTAATCCCTAATGAAATCCCGGCCCCCCGCAGGGCCACCAAAAG
GGAAAACCCCCAACCCCTTGGAAGCAAAA

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