GR408956

EST Overview


Name	GR408956
Unique Name	GR408956
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	776

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR408956 vs. SwissProt
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.100e-60
Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = -1

Query:  171 MRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 686
            MRC I YSYAKER GPLKPGV+TVE+AVKTVV PV+++F  VPVEL KY DRKV     E+DR VP+NVKKVS+QAR VV EVR  GV    S  AKTV+ K+EP AEQC V AW++LNQLPLFP VANAVLPKAA+C+EK+NEV+ SSA KG++V A+ PLVPTEKI KVF
Sbjct:    1 MRCAILYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKV----GELDRHVPSNVKKVSSQARSVVSEVRRDGV----STFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164

[Close]

BLAST of GR408956 vs. SwissProt
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.348e-55
Identity = 111/215 (51.63%), Postives = 152/215 (70.70%), Query Frame = -1

Query:  165 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVFLK-----------FEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 743
            +++ LK L+FVQ A ++ ++R  + Y+ AK++ GPLKPGV++VE AVKTVVGPV+EK+  VPVE+ KY+D+KVD SV+E+DR VP  VK+VS Q           AR +  EVR  GVVE+AS +AK+V+ K           +EPKAEQC V AWK+LNQLPLFP +A   +P AAFCSEK+N+ V  +A KG++V ++ PLVPTE+I K+F +
Sbjct:   18 EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232

[Close]

BLAST of GR408956 vs. SwissProt
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.755e-47
Identity = 103/215 (47.91%), Postives = 135/215 (62.79%), Query Frame = -1

Query:  165 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVF-----------LKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 743
            +E+ LK L+FVQ A I V++     Y YAKE  GPLKPGV TVE  VKTV+GPV+EKF  VP EL  +VDRKV+ S+ E++R VP+ VK+ S Q           A  V  EV+  GVV++A  + K V+            K+EP AEQ  V AW+ LN+LPLFP VA  V+P AA+ SEK+N+ V  +A +G+ V  + PL+PTE+I KVF D
Sbjct:   16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQD 230

[Close]

BLAST of GR408956 vs. SwissProt
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.108e-41
Identity = 93/202 (46.04%), Postives = 127/202 (62.87%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKT-----------VFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +E+ L+ LEFVQ A  QV++     Y+YAK+  GPL+PGVD VE  VK VVGPV+++F  VP++L K++DRKV ESV E+DR VP  VK+    AR    EVR  G+V +A+ LAK+           ++ ++EP AE+    AW  LN+LPL P V  AVLP AA  S ++N  V   A +G  V  + PLVPTE++ +VF
Sbjct:   31 EEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of GR408956 vs. SwissProt
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.108e-41
Identity = 93/202 (46.04%), Postives = 127/202 (62.87%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKT-----------VFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +E+ L+ LEFVQ A  QV++     Y+YAK+  GPL+PGVD VE  VK VVGPV+++F  VP++L K++DRKV ESV E+DR VP  VK+    AR    EVR  G+V +A+ LAK+           ++ ++EP AE+    AW  LN+LPL P V  AVLP AA  S ++N  V   A +G  V  + PLVPTE++ +VF
Sbjct:   31 EEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of GR408956 vs. SwissProt
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.599e-40
Identity = 90/200 (45.00%), Postives = 125/200 (62.50%), Query Frame = -1

Query:  165 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-------ARPVVFEVRCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 743
            +E+ LK L+FV+ A +  V      Y YAK+  GPLKPGVDT+E  VKTVV PV+     +P+E  K+VD+ VD SV+ +D  VP  +K+VS Q       A  +V +V  +       E AK ++   EPKAEQ  V+ W+ LN+LPL P VAN V+P A + SEK+N+VV  +  +G++V ++ PL+PTEKI KVF D
Sbjct:    6 EEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVY----YIPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGD 201

[Close]

BLAST of GR408956 vs. SwissProt
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.267e-37
Identity = 79/186 (42.47%), Postives = 117/186 (62.90%), Query Frame = -1

Query:  183 EQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKI 740
            E +LK LEF+Q A +         Y  AK+  GPLK GV+ +E+ V+TV+ P++EKF  VP +L  +VDRKVD+   +++  VP+ VK+ S+QA  V  EV+ TGVV++   +A++V  K+EP AE      W+ LNQLPLFP VA+ V+P A + SEK+N+ V     + +    + P++P EKI
Sbjct:   38 EMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKI 223

[Close]

BLAST of GR408956 vs. SwissProt
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.106e-24
Identity = 69/202 (34.16%), Postives = 100/202 (49.50%), Query Frame = -1

Query:  171 TQEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEV----------RCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 746
            ++E  LK L FV+ ATI ++      Y YAK+  GPLK  V+ VE AV TVV PV++KF  VP  L  ++D KV E   + D   P   KKV  QA  ++++             TG  ++A   A T +  F        V  W +LNQ      + +  LP AA  S ++N++V      G+ +  + PLVP + IVK +
Sbjct:    8 SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFF---VVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAY 206

[Close]

BLAST of GR408956 vs. SwissProt
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.143e-12
Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = -1

Query:  390 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKTV 743
            Q + LK L FVQ A    V      Y +AK++ GPL+PGVD +E  VK V  P++ +F  +P    K+VD  V  SV+ IDR +P  VK  S Q   VV  +R     E+A  LA ++
Sbjct:   11 QGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQ---VVSAIR--AAPEAARSLASSL 123

[Close]

BLAST of GR408956 vs. TrEMBL
Match: Q2HUF4_MEDTR (Rubber elongation factor OS=Medicago truncatula GN=MtrDRAFT_AC149135g10v2 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.858e-79
Identity = 154/191 (80.63%), Postives = 165/191 (86.39%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +EQELK LEFVQFATIQ VMRC I YSYAKER GPLK GVDTVEEAVKTVVGPV++KF QVPVEL KYVDRKVDESVSEIDR VPTNVKKVS QA  VV EVR TGVVESAS LAKTV+ K+EPKAEQC V AWKRLNQLPLFP VAN VLPKAA+CSEK+NE V SSA KG++V A+ PLVPTE+I KVF
Sbjct:   21 EEQELKYLEFVQFATIQAVMRCAILYSYAKERSGPLKSGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSEIDRHVPTNVKKVSNQAASVVSEVRRTGVVESASGLAKTVYSKYEPKAEQCAVSAWKRLNQLPLFPTVANVVLPKAAYCSEKYNEAVVSSAEKGYRVSAYLPLVPTERIAKVF 211

[Close]

BLAST of GR408956 vs. TrEMBL
Match: B7FK71_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.573e-78
Identity = 153/191 (80.10%), Postives = 164/191 (85.86%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +EQELK LE VQFATIQ VMRC I YSYAKER GPLK GVDTVEEAVKTVVGPV++KF QVPVEL KYVDRKVDESVSEIDR VPTNVKKVS QA  VV EVR TGVVESAS LAKTV+ K+EPKAEQC V AWKRLNQLPLFP VAN VLPKAA+CSEK+NE V SSA KG++V A+ PLVPTE+I KVF
Sbjct:   21 EEQELKYLESVQFATIQAVMRCAILYSYAKERSGPLKSGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSEIDRHVPTNVKKVSNQAASVVSEVRRTGVVESASGLAKTVYSKYEPKAEQCAVSAWKRLNQLPLFPTVANVVLPKAAYCSEKYNEAVVSSAEKGYRVSAYLPLVPTERIAKVF 211

[Close]

BLAST of GR408956 vs. TrEMBL
Match: B9RFA8_RICCO (Rubber elongation factor protein, putative OS=Ricinus communis GN=RCOM_1433280 PE=4 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 4.169e-55
Identity = 115/212 (54.25%), Postives = 148/212 (69.81%), Query Frame = -1

Query:  171 EQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVFL-----------KFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 740
            E+ LK LEFVQ A +  VM     Y YAK++ GPLKPGV+TVE  VK+VVGPV++KF  VP+E+ K+VDRKVDESV+++DR VP  VK+VS Q           AR V  EV+ TGV E+AS LAKT++            K+EPKAEQC V AW++LNQLPLFP VA   +P AA+CSEK+N+ V S+A KG++V ++ PLVPT+KI +VF
Sbjct:   17 EERLKYLEFVQVAALHAVMTFANLYVYAKDKAGPLKPGVETVEGTVKSVVGPVYDKFHDVPIEVLKFVDRKVDESVTKLDRRVPPVVKQVSAQAYSVAREAPVAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVSAWRKLNQLPLFPQVAQVFVPTAAYCSEKYNQTVVSTAEKGYRVSSYLPLVPTQKIAQVF 228

[Close]

BLAST of GR408956 vs. TrEMBL
Match: D7L3V3_ARALY (Rubber elongation factor family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477839 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.584e-54
Identity = 111/215 (51.63%), Postives = 152/215 (70.70%), Query Frame = -1

Query:  165 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVFLK-----------FEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 743
            +++ LK L+FVQ A ++ ++R  + Y+ AK++ GPLKPGV++VE AVKTVVGPV+EK+  VPVE+ KY+D+KVD SV+E+DR VP  VK+VS Q           AR +  EVR  GVVE+AS +AK+V+ K           +EPKAEQC V AWK+LNQLPLFP +A   +P AAFCSEK+N+ V  +A KG++V ++ PLVPTE+I K+F +
Sbjct:   18 EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYTKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232

[Close]

BLAST of GR408956 vs. TrEMBL
Match: A9PAR3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_671681 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.702e-54
Identity = 114/213 (53.52%), Postives = 148/213 (69.48%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTV-----------FLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +E+ LK L+FVQ A +  V+     Y YAK++ GPLKPGV+TVE  VK+VVGPV++KF +VP+E+ K+VDRKVDESV+ +D  VP  VK+VS++           AR V  EV+  GV E+ASELAK+V           + K+EPKAEQ  V AW++LNQLPLFP VA  V+P AAFCSEK+N+ + S+A KG+KV  + PLVPTEKI KVF
Sbjct:   17 EERRLKYLQFVQVAAVHAVLTFTNLYIYAKDKAGPLKPGVETVEGTVKSVVGPVYDKFREVPIEVLKFVDRKVDESVTNMDNHVPPLVKQVSSRALLAAQNAPVAARAVASEVQRAGVKETASELAKSVYSKYEPTAKELYSKYEPKAEQAAVSAWRKLNQLPLFPQVAQVVVPTAAFCSEKYNQTILSTAEKGYKVSLYLPLVPTEKIAKVF 229

[Close]

BLAST of GR408956 vs. TrEMBL
Match: C9E7B4_MORAL (Rubber elongation factor OS=Morus alba PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.027e-53
Identity = 112/215 (52.09%), Postives = 148/215 (68.84%), Query Frame = -1

Query:  165 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVF-----------LKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 743
            +EQ LK LEF+Q A I  ++     Y  AKE+ GPLKPGV+TVE  VK+VVGPV+EK   +P+EL K++DRKVD SV+E+DR VP  +K+VS+Q           AR +  EV+  GV ++AS +AKTVF            K+EPKAEQC V AW++LNQLPLFP VA+ V+P AA+ +EK+N+ V S+A KG+KV ++ PLVP EKIVKVF +
Sbjct:   18 EEQRLKYLEFIQVAVIHTIVYLSNLYGKAKEKSGPLKPGVETVEGTVKSVVGPVYEKVYDIPIELLKFIDRKVDASVTELDRHVPATLKQVSSQAFSAAQKAPEVARSLASEVQRAGVKDTASGIAKTVFTKYEPAAKELYAKYEPKAEQCAVTAWRKLNQLPLFPKVADVVVPTAAYYTEKYNQTVISTAEKGYKVSSYLPLVPVEKIVKVFSE 232

[Close]

BLAST of GR408956 vs. TrEMBL
Match: B9I7I6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_662705 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.529e-52
Identity = 113/213 (53.05%), Postives = 146/213 (68.54%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVFL-----------KFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +E+ LK L+FVQ A +  V+     Y YAK++ GPLKPGV+TVE  VK+VVG V++KF  VP+E+ K+VDRKVDESV+ +D  VP  VK+VS Q           AR V  EV+ +GV  +ASELAKTV+            K+EPKAEQ  V AW++LN+LPLFP VA  V+P AAFCSEK+N+ V S+A KG++V ++ PLVPTEKI KVF
Sbjct:   17 EERRLKYLQFVQVAAVHAVLTFTNLYIYAKDKAGPLKPGVETVEGTVKSVVGLVYDKFRDVPIEVLKFVDRKVDESVTSLDTHVPPLVKQVSFQALSAAQNAPVAARAVASEVQRSGVKGTASELAKTVYAKYEPTAKELYSKYEPKAEQAAVSAWRKLNKLPLFPQVAQVVVPTAAFCSEKYNQTVVSTAEKGYRVSSYLPLVPTEKIAKVF 229

[Close]

BLAST of GR408956 vs. TrEMBL
Match: A5B0Z6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033223 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.770e-51
Identity = 110/213 (51.64%), Postives = 142/213 (66.67%), Query Frame = -1

Query:  171 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKT-----------VFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 743
            +EQ LK LEFVQ AT+  V+     Y YAKER GPLKPGV TVE  VKTVV PV++KF  VP+EL +++DRKVDESVS+  + VP  VK+VS+Q           AR V  EV+ +G+V++AS LAK+           ++ K+EP A+   V AW  LN+LPLFP V   V+P AA+CSE++N+ V S+A KG+KV  + PLVPTEKI KVF
Sbjct:   16 EEQRLKYLEFVQVATLHAVLCFSSLYEYAKERSGPLKPGVQTVEGTVKTVVAPVYDKFHGVPIELLRFIDRKVDESVSKFGKQVPPVVKQVSSQAVAAAQKAPSVARAVTSEVQRSGIVDTASGLAKSAYTKCEPAAKDLYTKYEPVAQHYAVSAWHSLNRLPLFPQVVQVVVPTAAYCSERYNQTVLSTAEKGYKVSTYLPLVPTEKITKVF 228

[Close]

BLAST of GR408956 vs. TrEMBL
Match: B9GS91_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552425 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.888e-50
Identity = 103/203 (50.74%), Postives = 140/203 (68.97%), Query Frame = -1

Query:  165 EQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKT-----------VFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 740
            E+ LK L+FVQ A I +V+     Y YAKE  GPLKPGV TVE+ V+TV+GPV +KF  VP +L K+VD K+DES+  +DR VP+ VK+VS QAR V +E++ TGVV++A  + KT           ++ K+EP AEQ  VLAW+ LN+LPLFP VA   +P AAF SEK+N+VV S+A +G+ +  + PL+P E+I KVF +
Sbjct:   17 EKNLKYLDFVQMAAIYMVVCFSSVYRYAKENSGPLKPGVRTVEDTVRTVIGPVCDKFYGVPFQLLKFVDHKIDESLRGLDRQVPSQVKRVSIQARAVAYEIQRTGVVDAAMNITKTMYSKYEPTARELYYKYEPVAEQYAVLAWRSLNRLPLFPQVAQIAVPTAAFWSEKYNQVVGSAAEEGYTIALYLPLIPIERISKVFDE 219

[Close]

BLAST of GR408956 vs. TrEMBL
Match: B8LFH1_IPOBA (Stress related protein OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.436e-47
Identity = 109/208 (52.40%), Postives = 137/208 (65.87%), Query Frame = -1

Query:  174 TQEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQA-----------RPVVFEVRCTGVVESAS------ELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKV 746
            ++EQ LK LEFVQ A +  ++     YSYAKE LGPLKPGV TVE  VKTVVGPV++K   VP E+ K+VDRKVDESV +I+  VP +VK+VSTQA           R VV EV+ TGV+ + S        AK ++ K+EP AEQ    AW+ LNQLPL P VA AV P A++ SE++N  V   A KG+KV ++ PLVPTEKI K+
Sbjct:   21 SEEQRLKYLEFVQVAALHSILCAAKVYSYAKENLGPLKPGVQTVEGTVKTVVGPVYDKVHNVPGEVLKFVDRKVDESVHKIEDRVPPSVKQVSTQAFLTAQMAPGYVRDVVSEVKSTGVILAKSVYTQYQPAAKGLYNKYEPVAEQYASSAWRSLNQLPLVPRVAQAVAPTASYWSERYNHTVQVGAEKGYKVASYLPLVPTEKIAKL 228

[Close]

BLAST of GR408956 vs. TAIR peptide
Match: AT3G05500.1 (| Symbols: | Rubber elongation factor protein (REF) | chr3:1593540-1594802 FORWARD LENGTH=246)

HSP 1 Score: 216.468 bits (550), Expect = 1.344e-56
Identity = 111/215 (51.63%), Postives = 152/215 (70.70%), Query Frame = -1

Query:  165 QEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQ-----------ARPVVFEVRCTGVVESASELAKTVFLK-----------FEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVFPD 743
            +++ LK L+FVQ A ++ ++R  + Y+ AK++ GPLKPGV++VE AVKTVVGPV+EK+  VPVE+ KY+D+KVD SV+E+DR VP  VK+VS Q           AR +  EVR  GVVE+AS +AK+V+ K           +EPKAEQC V AWK+LNQLPLFP +A   +P AAFCSEK+N+ V  +A KG++V ++ PLVPTE+I K+F +
Sbjct:   18 EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232

[Close]

BLAST of GR408956 vs. TAIR peptide
Match: AT2G47780.1 (| Symbols: | Rubber elongation factor protein (REF) | chr2:19570076-19570864 FORWARD LENGTH=235)

HSP 1 Score: 156.762 bits (395), Expect = 1.264e-38
Identity = 79/186 (42.47%), Postives = 117/186 (62.90%), Query Frame = -1

Query:  183 EQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEVRCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKI 740
            E +LK LEF+Q A +         Y  AK+  GPLK GV+ +E+ V+TV+ P++EKF  VP +L  +VDRKVD+   +++  VP+ VK+ S+QA  V  EV+ TGVV++   +A++V  K+EP AE      W+ LNQLPLFP VA+ V+P A + SEK+N+ V     + +    + P++P EKI
Sbjct:   38 EMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKI 223

[Close]

BLAST of GR408956 vs. TAIR peptide
Match: AT1G67360.1 (| Symbols: | Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240)

HSP 1 Score: 111.309 bits (277), Expect = 6.091e-25
Identity = 69/202 (34.16%), Postives = 100/202 (49.50%), Query Frame = -1

Query:  171 TQEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEV----------RCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 746
            ++E  LK L FV+ ATI ++      Y YAK+  GPLK  V+ VE AV TVV PV++KF  VP  L  ++D KV E   + D   P   KKV  QA  ++++             TG  ++A   A T +  F        V  W +LNQ      + +  LP AA  S ++N++V      G+ +  + PLVP + IVK +
Sbjct:    8 SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFF---VVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAY 206

[Close]

BLAST of GR408956 vs. TAIR peptide
Match: AT1G67360.2 (| Symbols: | Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240)

HSP 1 Score: 111.309 bits (277), Expect = 6.091e-25
Identity = 69/202 (34.16%), Postives = 100/202 (49.50%), Query Frame = -1

Query:  171 TQEQELKSLEFVQFATIQVVMRCGIFYSYAKERLGPLKPGVDTVEEAVKTVVGPVFEKFPQVPVELFKYVDRKVDESVSEIDRPVPTNVKKVSTQARPVVFEV----------RCTGVVESASELAKTVFLKFEPKAEQCPVLAWKRLNQLPLFPHVANAVLPKAAFCSEKFNEVVFSSAGKGFKVFAFFPLVPTEKIVKVF 746
            ++E  LK L FV+ ATI ++      Y YAK+  GPLK  V+ VE AV TVV PV++KF  VP  L  ++D KV E   + D   P   KKV  QA  ++++             TG  ++A   A T +  F        V  W +LNQ      + +  LP AA  S ++N++V      G+ +  + PLVP + IVK +
Sbjct:    8 SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFF---VVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAY 206

The following BLAST results are available for this feature:

BLAST of GR408956 vs. SwissProt
BLAST of GR408956 vs. TrEMBL
BLAST of GR408956 vs. TAIR peptide

BLAST of GR408956 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
SRP_PHAVU	3.100e-60	69.19	Stress-related protein OS=Phaseolus vulgaris GN=SR...	[more]
Y3550_ARATH	1.348e-55	51.63	REF/SRPP-like protein At3g05500 OS=Arabidopsis tha...	[more]
SRP_VITRI	8.755e-47	47.91	Stress-related protein OS=Vitis riparia GN=SRP PE=...	[more]
Y5513_ORYSJ	1.108e-41	46.04	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 ...	[more]
Y5513_ORYSI	1.108e-41	46.04	REF/SRPP-like protein OsI_017815 OS=Oryza sativa s...	[more]
SRPP_HEVBR	1.599e-40	45.00	Small rubber particle protein OS=Hevea brasiliensi...	[more]
Y2778_ARATH	1.267e-37	42.47	REF/SRPP-like protein At2g47780 OS=Arabidopsis tha...	[more]
Y1736_ARATH	6.106e-24	34.16	REF/SRPP-like protein At1g67360 OS=Arabidopsis tha...	[more]
REF_HEVBR	3.143e-12	39.83	Rubber elongation factor protein OS=Hevea brasilie...	[more]

BLAST of GR408956 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HUF4_MEDTR	1.858e-79	80.63	Rubber elongation factor OS=Medicago truncatula GN...	[more]
B7FK71_MEDTR	1.573e-78	80.10	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9RFA8_RICCO	4.169e-55	54.25	Rubber elongation factor protein, putative OS=Rici...	[more]
D7L3V3_ARALY	1.584e-54	51.63	Rubber elongation factor family protein OS=Arabido...	[more]
A9PAR3_POPTR	2.702e-54	53.52	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C9E7B4_MORAL	1.027e-53	52.09	Rubber elongation factor OS=Morus alba PE=2 SV=1	[more]
B9I7I6_POPTR	2.529e-52	53.05	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5B0Z6_VITVI	4.770e-51	51.64	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GS91_POPTR	6.888e-50	50.74	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B8LFH1_IPOBA	1.436e-47	52.40	Stress related protein OS=Ipomoea batatas PE=2 SV=...	[more]

BLAST of GR408956 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G05500.1	1.344e-56	51.63	\| Symbols: \| Rubber elongation factor protein (RE...	[more]
AT2G47780.1	1.264e-38	42.47	\| Symbols: \| Rubber elongation factor protein (RE...	[more]
AT1G67360.1	6.091e-25	34.16	\| Symbols: \| Rubber elongation factor protein (RE...	[more]
AT1G67360.2	6.091e-25	34.16	\| Symbols: \| Rubber elongation factor protein (RE...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 43..54 score
None	No IPR available	SEG	seg	seg	coord: 34..50 score
None	No IPR available	SEG	seg	seg	coord: 36..55 score
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 12..202 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408956 ID=GR408956; Name=GR408956; organism=Cicer arietinum; type=EST; length=776bp
ATGGGTAAAAAAAATGATTCCCAAACACATCATATCCACCCCAAAAACAA
ACTAAACACAGTTTTTCTTTGCAATTATTGAAAAATTAAAAGGAAAAACT
AAACAAACAAACATAAAAAAAACGAAAAATCTGACACCCCCGAAAAAAAA
ATCTTCATCGATTAATCAGGGAAAACCTTAACAATCTTCTCAGTAGGAAC
CAAGGGAAAAAAAGCAAAAACCTTAAAACCTTTCCCCGCACTTGAAAAAA
CAACTTCATTAAACTTCTCACTACAAAAAGCAGCTTTAGGCAAAACCGCG
TTAGCCACATGAGGGAACAAAGGAAGCTGATTCAACCTCTTCCATGCCAA
AACGGGGCACTGCTCCGCTTTCGGTTCAAATTTCAAGAAAACGGTTTTGG
CCAGTTCGGAAGCGGATTCAACGACCCCGGTACAACGGACTTCAAAAACA
ACAGGGCGAGCTTGAGTTGAAACCTTCTTGACGTTAGTAGGAACGGGGCG
ATCTATCTCGGAAACGGATTCGTCAACTTTGCGATCGACGTATTTGAAAA
GCTCGACTGGGACTTGGGGGAATTTTTCGAAAACTGGACCGACGACGGTC
TTAACAGCTTCTTCAACGGTGTCAACCCCGGGTTTGAGTGGACCCAAACG
TTCTTTAGCGTAGGAATAGAAAATCCCGCAACGCATCACAACTTGAATTG
TTGCGAATTGCACAAATTCAAGGGACTTGAGTTCTTGCTCTTGGGTAATT
CCTCCCCAGCCATTTGTTGGTGGGGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR008802	REF

Search form