GR409111

EST Overview


Name	GR409111
Unique Name	GR409111
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	709

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5BTF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025852 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.756e-25
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = -1

Query:  506 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWE 709
            + K  P++ KCIFLGY P KKGY+CY P  KKFY +MDV+FFE+  +Y K  +QGE   ++ E Q WE
Sbjct:  740 RSKFAPQANKCIFLGYSPTKKGYKCYSPTNKKFYTTMDVSFFEHVFFYPKSHVQGE---SMNEHQVWE 804

HSP 2 Score: 61.6178 bits (148), Expect = 8.756e-25
Identity = 50/153 (32.68%), Postives = 69/153 (45.10%), Query Frame = -3

Query:    3 EFAASFRNRTDLHTIASCRTRN*PCDWRNSKPVTRYET*PE---KELLVYTRKKKTQREEE----IC------TSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 422
            +FA +  +   L ++   ++RN P       P+      P+   + L VY R++K Q  E      C       S  P +N   +   EVL  NID            D  LPI +RK VR CT HPIGNYV +  LS  Y AF T LD+ ++
Sbjct:  822 QFAPTELSTPMLSSVQPAQSRNVPSPVAIQSPMPIQPIAPQLANENLQVYIRRRKRQELEHGSQPTCGQYIDSISSLPEENIGEDRAGEVLIPNID------------DSTLPIALRKGVRRCTDHPIGNYVTYEGLSPSYRAFATSLDDTQV 962

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5AR74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039312 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.805e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  135 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESSI 209

HSP 2 Score: 59.3066 bits (142), Expect = 3.496e-7
Identity = 32/91 (35.16%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     EP  +   LPGN   + + +  L  + LN+PI  RK VRSC QHPIGN++ +  LS  + AF + +  I++
Sbjct:  232 KEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGSVDSELENDILNMPIAWRKGVRSCXQHPIGNFISYDKLSPTFRAFTSSITEIQV 322

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5C243_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  135 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 209

HSP 2 Score: 61.2326 bits (147), Expect = 9.200e-8
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     EP  +   LPGN   +   +  L  + LN+PI  RK VRSCTQHPIGN++ +  LS  + AF + +  I++
Sbjct:  232 KEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGNFISYDKLSPTFRAFTSSITEIQV 322

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5B6M3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015023 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  311 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 385

HSP 2 Score: 61.2326 bits (147), Expect = 9.200e-8
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     EP  +   LPGN   +   +  L  + LN+PI  RK VRSCTQHPIGN++ +  LS  + AF + +  I++
Sbjct:  408 KEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGNFISYDKLSPTFRAFTSSITEIQV 498

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5B5Q6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007267 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:   46 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 120

HSP 2 Score: 61.2326 bits (147), Expect = 9.200e-8
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     EP  +   LPGN   +   +  L  + LN+PI  RK VRSCTQHPIGN++ +  LS  + AF + +  I++
Sbjct:  143 KEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGNFISYDKLSPTFRAFTSSITEIQV 233

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5AQS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006799 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  481 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 555

HSP 2 Score: 60.8474 bits (146), Expect = 1.202e-7
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     EP  +   LPGN   +   +  L  + LN+PI  RK VRSCTQHPIGN++ +  LS  + AF + +  I++
Sbjct:  578 KEHIQEETEERXLSQQTHEAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGNFISYDKLSPTFRAFTSSITEIQV 668

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5AMB9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001656 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  753 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 827

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5ALJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034932 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  617 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 691

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5AGT0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006541 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.582e-18
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QPYY K  +QG  E +  E Q W++E   +  +
Sbjct:  135 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQG--ENSTQEYQFWDLESFSESPI 209

HSP 2 Score: 60.4622 bits (145), Expect = 1.569e-7
Identity = 32/91 (35.16%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     +P  +   LPGN   +   +  L  + LN+PI  RK VRSCTQHPIGN++ +  LS  + AF + +  I++
Sbjct:  232 KEHIQEETEERALSQQTHEAKPGPNPSKLPGNNAPDGTXDSELENDILNMPIAWRKGVRSCTQHPIGNFISYDKLSPTFRAFTSSITEIQV 322

[Close]

BLAST of GR409111 vs. TrEMBL
Match: A5ATA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035279 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.903e-18
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = -1

Query:  479 KGKLNPKSLKCIFLGYPPNKKGYRCYCPIRKKFYHSMDVTFFENQPYYLKVGLQGEREQNIAESQPWEMEQHLQQEV 709
            + KL+P+SLKCIFLGY  N+KGY+CY P+ +KFY+SMDVTFFE QP+Y K  +QG  E +  E Q W++E  ++  +
Sbjct: 1561 RSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVTFFETQPHYPKNDIQG--ENSTQEYQFWDLESFIESPI 1635

HSP 2 Score: 61.2326 bits (147), Expect = 9.200e-8
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = -3

Query:    3 KKKTQREEEICTSPRPIQNPEPNTDLEVLPGNIDFEPNDNCSLNENDLNLPIVVRKAVRSCTQHPIGNYVFHRNLSQEYMAFITILDNIKL 275
            K+  Q E E     +     EP  +   LPGN   +   +  L  + LN+PI  RK VRSCTQHPIGN++ +  LS  + AF + +  I++
Sbjct: 1658 KEHIQEETEKGALSQQTHEAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGNFISYDKLSPTFRAFTSSITEIQV 1748

The following BLAST results are available for this feature:

BLAST of GR409111 vs. TrEMBL

BLAST of GR409111 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A5BTF0_VITVI	8.756e-25	52.94	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AR74_VITVI	5.805e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5C243_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B6M3_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B5Q6_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AQS6_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AMB9_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5ALJ9_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5AGT0_VITVI	7.582e-18	54.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5ATA8_VITVI	9.903e-18	53.25	Putative uncharacterized protein OS=Vitis vinifera...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 14..27 score
None	No IPR available	SEG	seg	seg	coord: 2..34 score
None	No IPR available	SEG	seg	seg	coord: 30..72 score
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..85 score: 2.7
None	No IPR available	SEG	seg	seg	coord: 81..107 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR409111 ID=GR409111; Name=GR409111; organism=Cicer arietinum; type=EST; length=709bp
GGAAGTTTTATGTTATCCAATATGGTGATGAAGGCCATGTATTCTTGTGA
CAAATTTCTATGAAATACATAATTGCCAATTGGATGTTGAGTGCATGACC
TCACCGCTTTCCGCACAACAATTGGTAAGTTAAGATCATTCTCATTTAGA
CTGCAATTATCATTAGGCTCAAAATCTATATTACCTGGTAGAACTTCTAA
ATCTGTATTAGGTTCAGGATTTTGGATTGGCCTTGGAGATGTGCAGATTT
CTTCCTCCCTTTGAGTTTTCTTCTTCCTTGTGTACACCAGTAGTTCTTTT
TCCGGTTATGTCTCATATCTGGTTACAGGTTTGCTGTTTCTCCAGTCACA
AGGTCAATTTCTGGTTCTACAACTTGCTATTGTATGAAGGTCTGTTCTGT
TTCTAAAAGATGCTGCAAATTCTGTTGCTGCTGCAAATTTTGTTCCATTT
CATGTTGCAAATGCTGCAAATTATGTTCCACTTCTTGTTGCAAATGTTGT
TCCATTTCCCAAGGTTGGGATTCTGCTATGTTTTGTTCTCTCTCCCCCTG
AAGGCCAACTTTGAGGTAGTAAGGTTGATTTTCAAAGAAGGTTACATCCA
TGGAATGGTAGAATTTTTTTCTTATGGGACAGTAGCACCTGTATCCCTTC
TTATTTGGNGGGTATCCTAAGAATATGCATTTCAGGGATTTGGGATTTAA
TTTTCCTTT

Search form