GR409696

EST Overview


Name	GR409696
Unique Name	GR409696
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	719

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR409696 vs. TrEMBL
Match: Q9MFE5_BETVU (Orf105a protein OS=Beta vulgaris subsp. vulgaris GN=orf105a PE=4 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 6.463e-11
Identity = 29/58 (50.00%), Postives = 31/58 (53.45%), Query Frame = 3

Query:  456 SVDSFYKILISVCRRKVVCFNVWCSLSFLVEIYSGCLLEIDSYLC*LSLFGFIYYVCM 629
            SVDSFY+I ISVCRRKVVCFNVW S                       LFGF+  VCM
Sbjct:   67 SVDSFYQIEISVCRRKVVCFNVWSS---------------------SPLFGFLCCVCM 103

HSP 2 Score: 41.5874 bits (96), Expect = 6.463e-11
Identity = 26/63 (41.27%), Postives = 31/63 (49.21%), Query Frame = 1

Query:  151 KPWLPSGSTCLLSRRRSW*SGYKSSGTAFALWKNKGGFSSESANCCLSGRPPSSAGDLGETTK 339
            K W+ SGSTCL S +RSW      SG A  LWK     SSE     L   PP +A  +   T+
Sbjct:    3 KCWVCSGSTCLPSIQRSWLYACDGSGMALGLWKRGNRPSSEKNRASL--WPPPTAPPVPSKTR 63

The following BLAST results are available for this feature:

BLAST of GR409696 vs. TrEMBL

BLAST of GR409696 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
Q9MFE5_BETVU	6.463e-11	50.00	Orf105a protein OS=Beta vulgaris subsp. vulgaris G...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 72..89 score
None	No IPR available	SEG	seg	seg	coord: 9..23 score
None	No IPR available	SEG	seg	seg	coord: 16..42 score
None	No IPR available	SEG	seg	seg	coord: 63..74 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR409696 ID=GR409696; Name=GR409696; organism=Cicer arietinum; type=EST; length=719bp
GGCTTAGAGCTTCCCACGTCTATAAATAGAAGCTGCTTTCTCTATTTGGC
AAAGCAAGGGGAGATATGGATCCACCAGTTACCACTTTAACGCTTTTTCA
AATTGAGCAAGCTATTATTAATGTAGAGAACGCAAAGCTCCAGCAGGAGC
AAACCCTGGCTGCCTTCTGGGAGCACATGCCTCCTGTCGAGGAGGAGGTC
CTGGTAAAGCGGATACAAGAGCTCCGGGACCGCATTCGCGCTCTGGAAGA
ACAAAGGAGGTTTCTCATCCGAGAGCGCGAATTGCTGCTTATCAGGGCGG
CCTCCATCATCCGCGGGAGACCTGGGGGAAACAACTAAGAAGTCCTTTGT
TTTTGCTTTTCTTTTTAACTTCATATGTTGTTTGTTTACTTTGTTGTAAT
GTTGTGTTTAGTTGTGTGGCTGGTTTGTCTATGTGTGCGTAAGCTTCATA
AAGGGTCCGTCGACTCTTTCTATAAGATTTTAATAAGTGTCTGTAGACGC
AAAGTAGTGTGTTTTAATGTATGGTGTTCTTTGTCTTTTTTAGTGGAGAT
CTACTCCGGATGCTTACTGGAGATAGACTCTTATCTATGCTAACTATCTT
TGTTTGGTTTTATTTATTATGTTTGCATGTATGGTATGGGAAAAGCCCTA
GTTGTAAATCTTTACTACTTTATATAATTAATAATAATGTTCGTAAAAAT
GTGCTGAAAATTTAGAAGG

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