GR912440

EST Overview


Name	GR912440
Unique Name	GR912440
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	400

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR912440 vs. TrEMBL
Match: B9H724_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_651271 PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.275e-35
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            T++KELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNL+GNPIQ NI D+QL KA+CGLLPKLVY
Sbjct:  437 TIIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLVGNPIQSNISDDQLRKAICGLLPKLVY 519

[Close]

BLAST of GR912440 vs. TrEMBL
Match: B9GUX0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_643773 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.841e-34
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            T++KELYLAGNK SDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQ NI D+QL KA+CGLL KLVY
Sbjct:  376 TIIKELYLAGNKTSDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQSNISDDQLRKAICGLLSKLVY 458

[Close]

BLAST of GR912440 vs. TrEMBL
Match: B9RJL3_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1036030 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.658e-33
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            T++KELYLAGNKISDVEGLHRLLKLTV+DLSFNKITTTKALGQLVANYNSLQALNLLGNPIQ N+ ++QL KA+C LL KLVY
Sbjct:  518 TMIKELYLAGNKISDVEGLHRLLKLTVIDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQSNVSEDQLRKALCSLLTKLVY 600

[Close]

BLAST of GR912440 vs. TrEMBL
Match: A5AKV2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009732 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.117e-31
Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            TL+KELYLAGNKISDVE LHRLLKLTVLDLSFNKITTTK+LGQLVANYNSL ALNLLGNPIQ NI D+Q+ KAV  LLPKL Y
Sbjct:  606 TLIKELYLAGNKISDVEALHRLLKLTVLDLSFNKITTTKSLGQLVANYNSLLALNLLGNPIQSNISDDQIRKAVGSLLPKLAY 688

[Close]

BLAST of GR912440 vs. TrEMBL
Match: D7KV91_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476991 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.543e-31
Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            TL+KELYLAGNKIS+VEGLHRLLKL VLDLSFNKI TTKA+GQLVANYNSL ALN+LGNPIQ N+G++QL K V  LLPKLVY
Sbjct:  421 TLIKELYLAGNKISNVEGLHRLLKLIVLDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQSNVGEDQLRKTVSSLLPKLVY 503

[Close]

BLAST of GR912440 vs. TrEMBL
Match: Q9M9E4_ARATH (F3F9.22 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.240e-31
Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            TL+KELYLAGNKIS+VEGLHRLLKL VLDLSFNKI TTKA+GQLVANYNSL ALN+LGNPIQ N+G++QL K V  LLPKLVY
Sbjct:  250 TLIKELYLAGNKISNVEGLHRLLKLIVLDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQNNVGEDQLRKTVSSLLPKLVY 332

[Close]

BLAST of GR912440 vs. TrEMBL
Match: Q9C9Q9_ARATH (Putative uncharacterized protein At1g78230 OS=Arabidopsis thaliana GN=At1g78230 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.240e-31
Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            TL+KELYLAGNKIS+VEGLHRLLKL VLDLSFNKI TTKA+GQLVANYNSL ALN+LGNPIQ N+G++QL K V  LLPKLVY
Sbjct:  418 TLIKELYLAGNKISNVEGLHRLLKLIVLDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQNNVGEDQLRKTVSSLLPKLVY 500

[Close]

BLAST of GR912440 vs. TrEMBL
Match: B6SWQ3_MAIZE (Protein binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.693e-30
Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            T ++ELYLAGNKISDVEGLHRLLKL VLDLSFNKITT KALGQLVANY+SL ALNL+GNP+Q NIGD+ L +AV GLLP L Y
Sbjct:  452 TAIRELYLAGNKISDVEGLHRLLKLAVLDLSFNKITTAKALGQLVANYHSLLALNLVGNPVQANIGDDALRRAVTGLLPSLAY 534

[Close]

BLAST of GR912440 vs. TrEMBL
Match: B4F9F2_MAIZE (Protein binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.693e-30
Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            T ++ELYLAGNKISDVEGLHRLLKL VLDLSFNKITT KALGQLVANY+SL ALNL+GNP+Q NIGD+ L +AV GLLP L Y
Sbjct:  452 TAIRELYLAGNKISDVEGLHRLLKLAVLDLSFNKITTAKALGQLVANYHSLLALNLVGNPVQANIGDDALRRAVTGLLPSLAY 534

[Close]

BLAST of GR912440 vs. TrEMBL
Match: C6JRS9_SORBI (Putative uncharacterized protein Sb0012s006000 OS=Sorghum bicolor GN=Sb0012s006000 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.129e-30
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            T ++ELYLAGNKISDVEGLHRLLKL VLDLSFNKITT KALGQLVANY+SL ALNL+GNP+Q N+GD+ L +AV GLLP L Y
Sbjct:  454 TAIRELYLAGNKISDVEGLHRLLKLAVLDLSFNKITTAKALGQLVANYHSLLALNLVGNPVQANVGDDALRRAVTGLLPSLAY 536

[Close]

BLAST of GR912440 vs. TAIR peptide
Match: AT1G78230.1 (| Symbols: | Outer arm dynein light chain 1 protein | chr1:29430226-29432516 FORWARD LENGTH=681)

HSP 1 Score: 136.732 bits (343), Expect = 3.830e-33
Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = -1

Query:  134 TLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 382
            TL+KELYLAGNKIS+VEGLHRLLKL VLDLSFNKI TTKA+GQLVANYNSL ALN+LGNPIQ N+G++QL K V  LLPKLVY
Sbjct:  518 TLIKELYLAGNKISNVEGLHRLLKLIVLDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQNNVGEDQLRKTVSSLLPKLVY 600

[Close]

BLAST of GR912440 vs. TAIR peptide
Match: AT4G03260.2 (| Symbols: | Outer arm dynein light chain 1 protein | chr4:1429092-1431431 FORWARD LENGTH=677)

HSP 1 Score: 125.176 bits (313), Expect = 1.153e-29
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = -1

Query:  134 VKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 376
            +KELYLAGNKIS++EGLHRLLKLTVLDL FNK +TTK LGQL ANY+SLQA++L GNP Q N+GDEQL K + GLLP LVY
Sbjct:  488 LKELYLAGNKISEIEGLHRLLKLTVLDLRFNKFSTTKCLGQLAANYSSLQAISLEGNPAQKNVGDEQLRKYLLGLLPNLVY 568

[Close]

BLAST of GR912440 vs. TAIR peptide
Match: AT4G03260.1 (| Symbols: | Outer arm dynein light chain 1 protein | chr4:1429092-1431431 FORWARD LENGTH=677)

HSP 1 Score: 125.176 bits (313), Expect = 1.153e-29
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = -1

Query:  134 VKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQVNIGDEQLHKAVCGLLPKLVY 376
            +KELYLAGNKIS++EGLHRLLKLTVLDL FNK +TTK LGQL ANY+SLQA++L GNP Q N+GDEQL K + GLLP LVY
Sbjct:  488 LKELYLAGNKISEIEGLHRLLKLTVLDLRFNKFSTTKCLGQLAANYSSLQAISLEGNPAQKNVGDEQLRKYLLGLLPNLVY 568

The following BLAST results are available for this feature:

BLAST of GR912440 vs. TrEMBL
BLAST of GR912440 vs. TAIR peptide

BLAST of GR912440 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9H724_POPTR	1.275e-35	90.36	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GUX0_POPTR	1.841e-34	89.16	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RJL3_RICCO	2.658e-33	85.54	Protein binding protein, putative OS=Ricinus commu...	[more]
A5AKV2_VITVI	1.117e-31	85.54	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7KV91_ARALY	5.543e-31	81.93	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9M9E4_ARATH	7.240e-31	81.93	F3F9.22 OS=Arabidopsis thaliana PE=4 SV=1	[more]
Q9C9Q9_ARATH	7.240e-31	81.93	Putative uncharacterized protein At1g78230 OS=Arab...	[more]
B6SWQ3_MAIZE	4.693e-30	79.52	Protein binding protein OS=Zea mays PE=2 SV=1	[more]
B4F9F2_MAIZE	4.693e-30	79.52	Protein binding protein OS=Zea mays PE=2 SV=1	[more]
C6JRS9_SORBI	6.129e-30	78.31	Putative uncharacterized protein Sb0012s006000 OS=...	[more]

BLAST of GR912440 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G78230.1	3.830e-33	81.93	\| Symbols: \| Outer arm dynein light chain 1 prote...	[more]
AT4G03260.2	1.153e-29	75.31	\| Symbols: \| Outer arm dynein light chain 1 prote...	[more]
AT4G03260.1	1.153e-29	75.31	\| Symbols: \| Outer arm dynein light chain 1 prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 30..43 score:
None	No IPR available	GENE3D	3.80.10.10	no description	coord: 10..88 score: 2.9
None	No IPR available	PANTHER	PTHR10588	LEUCINE RICH REPEAT FAMILY	coord: 7..89 score: 1.4
None	No IPR available	PANTHER	PTHR10588:SF29	UNCHARACTERIZED	coord: 7..89 score: 1.4
None	No IPR available	PROFILE	PS51450	LRR	coord: 8..29 score: 7.435coord: 30..51 score: 7.712coord: 56..78 score: 5
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 9..89 score: 8.9

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR912440 ID=GR912440; Name=GR912440; organism=Cicer arietinum; type=EST; length=400bp
GATTAGCGTGGTCGCGGCCGAGGTACATGTTAATTTTTATGTGTGCGTGC
TTGGAGGATCATGCGTCCACATCATTTAAGAGTATCACCTTTCTTGAAGT
GGGGTTGGATGTTTTCTTACATGCTAAAAAAGGGTACACTAGCTTTGGAA
GAAGACCACAAACTGCTTTGTGCAGCTGCTCATCACCAATGTTGACTTGA
ATTGGATTTCCAAGCAGATTCAGGGCCTGAAGTGAGTTGTAGTTAGCTAC
AAGCTGCCCTAATGCTTTGGTCGTCGTGATCTTGTTAAAGCTCAAGTCCA
GAACTGTTAGCTTCAATAACCTGTGTAGCCCCTCAACATCACTTATCTTG
TTTCCAGCAAGATATAGCTCTTTGACCAGTGTACCTGCCCGGGCGGCCGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt

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