GR917454
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR917454 vs. TrEMBL
Match: Q2HVT6_MEDTR (Nuclear pore complex protein Nup205 , related (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC148343g19v2 PE=4 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.537e-33 Identity = 82/134 (61.19%), Postives = 86/134 (64.18%), Query Frame = 2 Query: 20 EVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQ---------------------------VALTCMAKLRDERFMFPGSLSSDNIT 340 +VRE I QLLRWGWKYNKNLEEQASQLHMLTAWSQ VEVSASRRL MLEDRSEILFQI + FILSQ VALTCMAKLRDERFMFPG+LSSD+IT Sbjct: 551 DVRETIQQLLRWGWKYNKNLEEQASQLHMLTAWSQSVEVSASRRLVMLEDRSEILFQILDASLSASASPDCSLKMAFILSQSLSAQRAASWPKAVTGSQQSEYLQRLSVALTCMAKLRDERFMFPGNLSSDSIT 684
BLAST of GR917454 vs. TrEMBL
Match: B9MTK1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_676122 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.101e-31 Identity = 68/107 (63.55%), Postives = 81/107 (75.70%), Query Frame = 2 Query: 20 EVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +VRE I QLLRWGWKYNKNLEEQA+QLHMLT WS IVEVSASRR+ LE+RS+IL+++ + F+LSQVALTCMAKLRDERF+ G L+SDN+T Sbjct: 73 DVRETIQQLLRWGWKYNKNLEEQAAQLHMLTGWSHIVEVSASRRIHSLENRSDILYRVLDASLSASASRDCSLRMAFVLSQVALTCMAKLRDERFLCSGGLNSDNMT 179
BLAST of GR917454 vs. TrEMBL
Match: D7TC07_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015528001 PE=4 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.453e-31 Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 2 Query: 20 EVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +VRE I QLLRWGWKYNKNLEEQA+QLHML WSQ+VEVSASRRL+ LE+R+EILFQ+ + L QVALTCMAKLRDERF+ PG L+SD++T Sbjct: 1208 DVRETIQQLLRWGWKYNKNLEEQAAQLHMLIGWSQVVEVSASRRLSHLENRAEILFQLLDASLTASASPDCSLKMAVTLCQVALTCMAKLRDERFLCPGGLNSDSVT 1314
BLAST of GR917454 vs. TrEMBL
Match: Q9LU53_ARATH (Similarity to unknown protein OS=Arabidopsis thaliana GN=At5g51200 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.322e-31 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +EVRE I QLL+WGWKYN+NLEEQA+QLHML WSQIVEVSA RR++ L++RSEIL++I + F+L+QVALTC+AKLRD+RF F G+LSSD +T Sbjct: 1144 SEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEVSACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQGALSSDTVT 1251
BLAST of GR917454 vs. TrEMBL
Match: D7MQY3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495190 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.322e-31 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +EVRE I QLL+WGWKYN+NLEEQA+QLHML WSQIVEVSA RR++ L++RSEIL++I + F+L+QVALTC+AKLRD+RF F G+LSSD +T Sbjct: 1144 SEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEVSACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQGALSSDTVT 1251
BLAST of GR917454 vs. TrEMBL
Match: B9F3W5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05800 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.488e-28 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +E++E+ HQ+L+W W+YNKNLEEQA+QLHMLT WSQIVE++ SRR+++LEDRS +LF++ + +IL+ VALTCMAKLRDERF+ P SD +T Sbjct: 1209 SELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLEDRSHLLFELLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVT 1316
BLAST of GR917454 vs. TrEMBL
Match: C5XXW4_SORBI (Putative uncharacterized protein Sb04g007000 OS=Sorghum bicolor GN=Sb04g007000 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.788e-27 Identity = 55/108 (50.93%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 A ++E++H LL+W W+YNKNLEEQA+QLHMLT WSQIVEV+ SRR+++ E+RS++LF++ + ++L+ V+LTCMAKLRDERF+ P SD +T Sbjct: 1191 AGLKESVHHLLKWAWRYNKNLEEQAAQLHMLTGWSQIVEVAVSRRMSLFEERSQLLFELLDASLNATTSPDCSVKMAYVLTNVSLTCMAKLRDERFICPTGTDSDAVT 1298
BLAST of GR917454 vs. TrEMBL
Match: A9TC03_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_143304 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.551e-22 Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPG-SLSSDNIT 340 +E+REA+ QLLRW WK NKNLEEQA+QLHML WSQ+VE++ SRR L R+ +LF+I + F+LSQVALT MAKL+++ + PG S+D++T Sbjct: 1146 SELREAVQQLLRWAWKRNKNLEEQAAQLHMLVGWSQLVEITISRRFHFLGSRTHVLFEILDASISATTSQDCSLRMAFLLSQVALTTMAKLQEQSIISPGEGDSTDDVT 1254
BLAST of GR917454 vs. TrEMBL
Match: B8ADU0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06283 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.219e-15 Identity = 46/108 (42.59%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +E++E+ HQ+L+W W+YNKNLEEQA+QLHMLT WSQIVE VALTCMAKLRDERF+ P SD +T Sbjct: 1189 SELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVE-------------------------------------------VALTCMAKLRDERFICPTGADSDAVT 1253
BLAST of GR917454 vs. TrEMBL
Match: B9SER9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0223370 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.013e-13 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 2 Query: 20 EVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEV 136 +VREAI QLLRWGWKYNKNLEEQA+QLHMLT WSQIVEV Sbjct: 1085 DVREAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQIVEV 1123
BLAST of GR917454 vs. TAIR peptide
Match: AT5G51200.1 (| Symbols: | Protein of unknown function (DUF3414) | chr5:20804926-20819408 FORWARD LENGTH=1838) HSP 1 Score: 136.346 bits (342), Expect = 3.602e-33 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 17 AEVREAIHQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQIXXXXXXXXXXXXXXXNIVFILSQVALTCMAKLRDERFMFPGSLSSDNIT 340 +EVRE I QLL+WGWKYN+NLEEQA+QLHML WSQIVEVSA RR++ L++RSEIL++I + F+L+QVALTC+AKLRD+RF F G+LSSD +T Sbjct: 1174 SEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEVSACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQGALSSDTVT 1281 The following BLAST results are available for this feature:
BLAST of GR917454 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR917454 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR917454 ID=GR917454; Name=GR917454; organism=Cicer arietinum; type=EST; length=341bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|