GR917821

EST Overview


Name	GR917821
Unique Name	GR917821
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	387

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR917821 vs. SwissProt
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.423e-25
Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 1

Query:   85 EVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            E N K +VEKFKKACE +RFR    +Y+ TVRRL  AKR  +V +I+E QK Y D+S EGF+AR+I+LYGK+GM  +A K+F+EMP ++C R+
Sbjct:   51 ERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRS 143

[Close]

BLAST of GR917821 vs. SwissProt
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.423e-25
Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1

Query:   97 KTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            K + EKFKKAC+ + FRK   +YE TVRRLA AK+F WV +I+E Q  Y ++S EGF AR+I LYG+ GM  +A K+FDEMP++NC RT
Sbjct:   52 KFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRT 140

[Close]

BLAST of GR917821 vs. SwissProt
Match: PP225_ARATH (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.310e-22
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1

Query:   82 KEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            K   L   VEKFK++CE + FR+  G+Y   +RRL  AK+F  + +++++QK + DI +E F  R++ LYG SGM  HAHKLFDEMP+ NC+RT
Sbjct:   63 KNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERT 156

[Close]

BLAST of GR917821 vs. SwissProt
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 6.419e-10
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 1

Query:  163 YEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            +EDTV RLAGA R  ++ D++EHQK       EGF  R+I LYGK+GM + A   F  M    C R+
Sbjct:   74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRS 140

[Close]

BLAST of GR917821 vs. TrEMBL
Match: D7UE43_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_271.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005273001 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.176e-33
Identity = 66/98 (67.35%), Postives = 82/98 (83.67%), Query Frame = 1

Query:   70 QDLYKEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            +D+Y+E NLK LV+KFKK+ E+DRFR KTGIYE+TVRRLA AKRFRW+ +I+E QK Y DIS EGF+ RLI+LYGKSGM  HA K+FDEMP + C+R+
Sbjct:   39 KDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERS 136

[Close]

BLAST of GR917821 vs. TrEMBL
Match: A5BG37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005999 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.176e-33
Identity = 66/98 (67.35%), Postives = 82/98 (83.67%), Query Frame = 1

Query:   70 QDLYKEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            +D+Y+E NLK LV+KFKK+ E+DRFR KTGIYE+TVRRLA AKRFRW+ +I+E QK Y DIS EGF+ RLI+LYGKSGM  HA K+FDEMP + C+R+
Sbjct:   31 KDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERS 128

[Close]

BLAST of GR917821 vs. TrEMBL
Match: B9RXW7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0906770 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.623e-30
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 1

Query:   76 LYKEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            LYKE NLK LVEKFKK  E DRFR KTGIYE+T+RRLA AKRF W+ +I+E QK Y DI  EG++ARLI LYGKS M  ++ K+FDEMP +NC RT
Sbjct:   32 LYKERNLKRLVEKFKKFSENDRFRTKTGIYEETIRRLAIAKRFNWIEEILEDQKKYKDIHKEGYNARLIRLYGKSNMFDNSRKVFDEMPDRNCKRT 127

[Close]

BLAST of GR917821 vs. TrEMBL
Match: B9H1W8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_647668 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.259e-27
Identity = 59/99 (59.60%), Postives = 80/99 (80.81%), Query Frame = 1

Query:   67 SQDLYKEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            S ++++E +LK LVEKFKKA E +RFR K+ IY+DT+RRLA AK+FR+V +I+E+QK Y D+S EGF+ARLI+LYG SGM  +A K+FDEM ++ C RT
Sbjct:   30 SNEVFRERSLKRLVEKFKKASENERFRTKSAIYKDTIRRLAAAKKFRYVEEILENQKQYQDMSKEGFNARLISLYGSSGMFDNARKVFDEMLERKCART 128

[Close]

BLAST of GR917821 vs. TrEMBL
Match: D7KN35_ARALY (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474658 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.638e-25
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 1

Query:   85 EVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            E N + +VEKFKKACE +RFR    +Y+ TVRRL  AKR  +V +I+E QK Y D+S EGF+AR+I+LYGK+GM  +A K+FDEMP +NC R+
Sbjct:   48 ERNPQRIVEKFKKACESERFRNNIAVYDRTVRRLVAAKRLHFVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFDEMPDRNCKRS 140

[Close]

BLAST of GR917821 vs. TrEMBL
Match: D7L0P3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478692 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.702e-24
Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1

Query:   97 KTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            K ++EKFKKAC+ + FRK   +YE TVRRLA AK+F WV +I+E Q  Y ++S EGF AR+I LYG+ GM  +A K+FDEMP++NC RT
Sbjct:   52 KFIMEKFKKACQAEWFRKNIAVYEKTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRT 140

[Close]

BLAST of GR917821 vs. TrEMBL
Match: A5BG36_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005998 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.474e-23
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1

Query:  103 LVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            +V+KFKK+ +  RFR + G YE  V  LA AK+F ++ DI+EHQK Y++IS E F+ RL+TLYGK+GM  HAHKLFDE P+ NC+RT
Sbjct:    1 MVDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXPKLNCERT 87

[Close]

BLAST of GR917821 vs. TrEMBL
Match: A5B8D6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029137 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.593e-22
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 1

Query:  115 FKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            FKK+ +  RFR + G YE  V  LA AK+F ++ DI+EHQK Y++IS E F+ RLITLYGK+GM  HAHKLFDEMP+ NC+RT
Sbjct:  157 FKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERT 239

[Close]

BLAST of GR917821 vs. TrEMBL
Match: B9HYT4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_727768 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.080e-22
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 1

Query:   76 LYKEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            +YKE N K LV+KFK A   + FR K  IY++T+RRL+ +++F +V +I+E QK Y D+S EGF+ARLI+LYG  GM  HA K+FDEM ++ C RT
Sbjct:   38 IYKERNHKKLVKKFKNASVNEHFRTKVAIYKETIRRLSVSRKFDYVEEILEDQKQYKDMSKEGFNARLISLYGSVGMFDHARKVFDEMRERQCART 133

[Close]

BLAST of GR917821 vs. TrEMBL
Match: B9RXW5_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0906750 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.348e-21
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 1

Query:   82 KEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            KE  L+ LV+++K++ E   FR +   Y   VRRL+ AK+F  V D +EHQKN++DI+NE F+ RLI+LYGK+GM  HAH+LFDEMP   C RT
Sbjct:   31 KERKLQKLVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRT 124

[Close]

BLAST of GR917821 vs. TAIR peptide
Match: AT3G13160.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4229994-4231178 REVERSE LENGTH=394)

HSP 1 Score: 114.775 bits (286), Expect = 1.417e-26
Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1

Query:   97 KTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            K + EKFKKAC+ + FRK   +YE TVRRLA AK+F WV +I+E Q  Y ++S EGF AR+I LYG+ GM  +A K+FDEMP++NC RT
Sbjct:   52 KFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRT 140

[Close]

BLAST of GR917821 vs. TAIR peptide
Match: AT1G55890.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:20901364-20902560 FORWARD LENGTH=398)

HSP 1 Score: 114.775 bits (286), Expect = 1.417e-26
Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 1

Query:   85 EVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            E N K +VEKFKKACE +RFR    +Y+ TVRRL  AKR  +V +I+E QK Y D+S EGF+AR+I+LYGK+GM  +A K+F+EMP ++C R+
Sbjct:   51 ERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRS 143

[Close]

BLAST of GR917821 vs. TAIR peptide
Match: AT3G13150.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4227975-4229630 REVERSE LENGTH=551)

HSP 1 Score: 102.449 bits (254), Expect = 7.277e-23
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1

Query:   82 KEVNLKTLVEKFKKACEIDRFRKKTGIYEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            K   L   VEKFK++CE + FR+  G+Y   +RRL  AK+F  + +++++QK + DI +E F  R++ LYG SGM  HAHKLFDEMP+ NC+RT
Sbjct:   63 KNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERT 156

[Close]

BLAST of GR917821 vs. TAIR peptide
Match: AT1G80150.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:30148738-30149931 FORWARD LENGTH=397)

HSP 1 Score: 62.7734 bits (151), Expect = 6.390e-11
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 1

Query:  163 YEDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            +EDTV RLAGA R  ++ D++EHQK       EGF  R+I LYGK+GM + A   F  M    C R+
Sbjct:   74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRS 140

[Close]

BLAST of GR917821 vs. TAIR peptide
Match: AT2G18520.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8034036-8035292 REVERSE LENGTH=418)

HSP 1 Score: 51.9878 bits (123), Expect = 1.128e-7
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 1

Query:  166 EDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            E TV+RLA ++RF  +  +IE  KN   I  E F + LI  YG++ M  HA K+F+EM +    RT
Sbjct:   71 ELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRT 136

[Close]

BLAST of GR917821 vs. TAIR peptide
Match: AT4G36680.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17292479-17293717 REVERSE LENGTH=412)

HSP 1 Score: 50.447 bits (119), Expect = 3.282e-7
Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 1

Query:  166 EDTVRRLAGAKRFRWVRDIIEHQKNYSDISNEGFSARLITLYGKSGMHRHAHKLFDEMPQKNCDRT 363
            E TVRRLA  +RF  +  +IE  KN   I  E F + LI  YG++ M  HA + F++M Q    R+
Sbjct:   71 ELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRS 136

The following BLAST results are available for this feature:

BLAST of GR917821 vs. SwissProt
BLAST of GR917821 vs. TrEMBL
BLAST of GR917821 vs. TAIR peptide

BLAST of GR917821 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
PPR82_ARATH	1.423e-25	55.91	Pentatricopeptide repeat-containing protein At1g55...	[more]
PP226_ARATH	1.423e-25	57.30	Pentatricopeptide repeat-containing protein At3g13...	[more]
PP225_ARATH	7.310e-22	48.94	Pentatricopeptide repeat-containing protein At3g13...	[more]
PP134_ARATH	6.419e-10	46.27	Pentatricopeptide repeat-containing protein At1g80...	[more]

BLAST of GR917821 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7UE43_VITVI	1.176e-33	67.35	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BG37_VITVI	1.176e-33	67.35	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RXW7_RICCO	4.623e-30	66.67	Pentatricopeptide repeat-containing protein, putat...	[more]
B9H1W8_POPTR	1.259e-27	59.60	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KN35_ARALY	7.638e-25	56.99	Pentatricopeptide repeat-containing protein OS=Ara...	[more]
D7L0P3_ARALY	1.702e-24	57.30	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A5BG36_VITVI	5.474e-23	57.47	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B8D6_VITVI	1.593e-22	60.24	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HYT4_POPTR	2.080e-22	53.13	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RXW5_RICCO	1.348e-21	53.19	Pentatricopeptide repeat-containing protein, putat...	[more]

BLAST of GR917821 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT3G13160.1	1.417e-26	57.30	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT1G55890.1	1.417e-26	55.91	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT3G13150.1	7.277e-23	48.94	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT1G80150.1	6.390e-11	46.27	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT2G18520.1	1.128e-7	42.42	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT4G36680.1	3.282e-7	40.91	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10483	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 27..109 score: 1.9
None	No IPR available	SEG	seg	seg	coord: 1..11 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR917821 ID=GR917821; Name=GR917821; organism=Cicer arietinum; type=EST; length=387bp
GATTAGCGTGGTCGCGGCCGAGGTACCATAACATAATCAACCACCACCAC
CAGTATCAAATCCATTTCACAGGACCTCTACAAGGAAGTGAACCTCAAAA
CCCTCGTTGAAAAATTCAAGAAAGCTTGCGAAATCGACCGCTTCCGTAAA
AAAACCGGCATCTACGAAGACACCGTCCGCCGCCTCGCCGGAGCTAAACG
GTTCCGATGGGTCCGTGACATTATCGAACACCAGAAGAATTACTCAGACA
TATCCAATGAAGGTTTTTCAGCGCGACTCATCACACTATACGGGAAATCA
GGAATGCACAGACACGCACACAAACTGTTTGATGAAATGCCTCAGAAAAA
CTGTGACCGTACCTGCCCCGGGCGGCCGCTCCCGAAA

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